RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
CTSA-205ENST00000419493 TIAM2Q8IVF5 1701 aa12.34□□□□□ -0.43
CTSA-205ENST00000419493 PPIP5K2O43314 1243 aa12.33□□□□□ -0.44
CTSA-205ENST00000419493 PDE8AO60658 829 aa12.33□□□□□ -0.44
CTSA-205ENST00000419493 CCDC152Q4G0S7 254 aa12.33□□□□□ -0.44
CTSA-205ENST00000419493 TMC4Q7Z404 712 aa12.33□□□□□ -0.44
CTSA-205ENST00000419493 SLC51AQ86UW1 340 aa12.33□□□□□ -0.44
CTSA-205ENST00000419493 SUPT20HQ8NEM7 779 aa12.33□□□□□ -0.44
CTSA-205ENST00000419493 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
CTSA-205ENST00000419493 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
CTSA-205ENST00000419493 CELF1Q92879 486 aaKnown RBP12.33□□□□□ -0.44
CTSA-205ENST00000419493 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
CTSA-205ENST00000419493 NEURL1BA8MQ27 555 aa12.32□□□□□ -0.44
CTSA-205ENST00000419493 E9PSI1 815 aa12.32□□□□□ -0.44
CTSA-205ENST00000419493 IGKV5-2P06315 115 aa12.32□□□□□ -0.44
CTSA-205ENST00000419493 HSPA6P17066 643 aa12.32□□□□□ -0.44
CTSA-205ENST00000419493 RPS8P62241 208 aaKnown RBP12.32□□□□□ -0.44
CTSA-205ENST00000419493 AOC3Q16853 763 aa12.32□□□□□ -0.44
CTSA-205ENST00000419493 NIM1KQ8IY84 436 aa12.32□□□□□ -0.44
CTSA-205ENST00000419493 NSFL1CQ9UNZ2 370 aaKnown RBP12.32□□□□□ -0.44
CTSA-205ENST00000419493 GJA3Q9Y6H8 435 aa12.32□□□□□ -0.44
CTSA-205ENST00000419493 LAMB2P55268 1798 aa12.31□□□□□ -0.44
CTSA-205ENST00000419493 IQCA1LA6NCM1 817 aa12.31□□□□□ -0.44
CTSA-205ENST00000419493 F6X3S4 739 aa12.31□□□□□ -0.44
CTSA-205ENST00000419493 UBE3BQ7Z3V4 1068 aa12.31□□□□□ -0.44
CTSA-205ENST00000419493 SMC1BQ8NDV3 1235 aa12.31□□□□□ -0.44
CTSA-205ENST00000419493 SEC31BQ9NQW1 1179 aa12.31□□□□□ -0.44
CTSA-205ENST00000419493 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
CTSA-205ENST00000419493 ZNF541Q9H0D2 1346 aa12.31□□□□□ -0.44
CTSA-205ENST00000419493 TAF1P21675 1872 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 POTECB2RU33 542 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 C6orf229H3BNL8 230 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 FZD9O00144 591 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 FSTL1Q12841 308 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 GCKRQ14397 625 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 SLC4A10Q6U841 1118 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 LINS1Q8NG48 757 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 DDX60Q8IY21 1712 aaKnown RBP12.3□□□□□ -0.44
CTSA-205ENST00000419493 CDHR2Q9BYE9 1310 aa12.3□□□□□ -0.44
CTSA-205ENST00000419493 CTSWP56202 376 aa12.29□□□□□ -0.44
CTSA-205ENST00000419493 SLFN5Q08AF3 891 aa12.29□□□□□ -0.44
CTSA-205ENST00000419493 WASHC4Q2M389 1173 aa12.29□□□□□ -0.44
CTSA-205ENST00000419493 EAPPQ56P03 285 aaPredicted RBP12.29□□□□□ -0.44
CTSA-205ENST00000419493 ANKRD18AQ8IVF6 992 aa12.29□□□□□ -0.44
CTSA-205ENST00000419493 MIER1Q8N108 512 aa12.29□□□□□ -0.44
CTSA-205ENST00000419493 GPC2Q8N158 579 aa12.29□□□□□ -0.44
CTSA-205ENST00000419493 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
CTSA-205ENST00000419493 ANKIB1Q9P2G1 1089 aa12.29□□□□□ -0.44
CTSA-205ENST00000419493 HACL1Q9UJ83 578 aa12.29□□□□□ -0.44
CTSA-205ENST00000419493 G3V3G9 751 aa12.28□□□□□ -0.44
CTSA-205ENST00000419493 H7C1W4 665 aa12.28□□□□□ -0.44
CTSA-205ENST00000419493 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
CTSA-205ENST00000419493 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
CTSA-205ENST00000419493 APLP1P51693 650 aa12.28□□□□□ -0.44
CTSA-205ENST00000419493 GPSM2P81274 684 aa12.28□□□□□ -0.44
CTSA-205ENST00000419493 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
CTSA-205ENST00000419493 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
CTSA-205ENST00000419493 RTFDC1Q9BY42 306 aaPredicted RBP12.28□□□□□ -0.44
CTSA-205ENST00000419493 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
CTSA-205ENST00000419493 CACNA1FO60840 1977 aa12.28□□□□□ -0.44
CTSA-205ENST00000419493 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
CTSA-205ENST00000419493 KIAA2012Q0VF49 1180 aa12.27□□□□□ -0.45
CTSA-205ENST00000419493 TTLL11Q8NHH1 800 aa12.27□□□□□ -0.45
CTSA-205ENST00000419493 L3MBTL3Q96JM7 780 aaPredicted RBP12.27□□□□□ -0.45
CTSA-205ENST00000419493 EYA3Q99504 573 aa12.27□□□□□ -0.45
CTSA-205ENST00000419493 C9orf78Q9NZ63 289 aaPredicted RBP12.27□□□□□ -0.45
CTSA-205ENST00000419493 ZNRF3Q9ULT6 936 aa12.27□□□□□ -0.45
CTSA-205ENST00000419493 WDR90Q96KV7 1748 aa12.27□□□□□ -0.45
CTSA-205ENST00000419493 EPHX2P34913 555 aa12.26□□□□□ -0.45
CTSA-205ENST00000419493 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
CTSA-205ENST00000419493 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
CTSA-205ENST00000419493 ZC3H12CQ9C0D7 883 aaKnown RBP12.26□□□□□ -0.45
CTSA-205ENST00000419493 TAF1DQ9H5J8 278 aaPredicted RBP12.26□□□□□ -0.45
CTSA-205ENST00000419493 GREM2Q9H772 168 aa12.26□□□□□ -0.45
CTSA-205ENST00000419493 POLLQ9UGP5 575 aa12.26□□□□□ -0.45
CTSA-205ENST00000419493 CHMP3Q9Y3E7 222 aa12.26□□□□□ -0.45
CTSA-205ENST00000419493 RAD17O75943 681 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 UFL1O94874 794 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 POTEIP0CG38 1075 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 IGHMBP2P38935 993 aaKnown RBP12.25□□□□□ -0.45
CTSA-205ENST00000419493 TNIP1Q15025 636 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 CIAPIN1Q6FI81 312 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 PNMA8AQ86V59 439 aaPredicted RBP12.25□□□□□ -0.45
CTSA-205ENST00000419493 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
CTSA-205ENST00000419493 SRCIN1Q9C0H9 1055 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 DBNDD1Q9H9R9 158 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 GGA1Q9UJY5 639 aa12.25□□□□□ -0.45
CTSA-205ENST00000419493 ITGA6P23229 1130 aa12.24□□□□□ -0.45
CTSA-205ENST00000419493 COL4A5P29400 1685 aa12.24□□□□□ -0.45
CTSA-205ENST00000419493 CXCL9Q07325 125 aa12.24□□□□□ -0.45
CTSA-205ENST00000419493 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
CTSA-205ENST00000419493 TBC1D16Q8TBP0 767 aa12.24□□□□□ -0.45
CTSA-205ENST00000419493 SSH1Q8WYL5 1049 aa12.24□□□□□ -0.45
CTSA-205ENST00000419493 GPR101Q96P66 508 aaPredicted RBP12.24□□□□□ -0.45
CTSA-205ENST00000419493 MPHOSPH8Q99549 860 aa12.24□□□□□ -0.45
CTSA-205ENST00000419493 PLA2G12BQ9BX93 195 aa12.24□□□□□ -0.45
CTSA-205ENST00000419493 XDHP47989 1333 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms