RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 CTSWP56202 376 aa22.33■■□□□ 1.17
EPCAM-203ENST00000419334 GRAPQ13588 217 aa22.33■■□□□ 1.17
EPCAM-203ENST00000419334 CCDC152Q4G0S7 254 aa22.33■■□□□ 1.17
EPCAM-203ENST00000419334 CCDC93Q567U6 631 aa22.33■■□□□ 1.17
EPCAM-203ENST00000419334 GRAPLQ8TC17 118 aaPredicted RBP22.33■■□□□ 1.17
EPCAM-203ENST00000419334 CCDC88AQ3V6T2 1871 aa22.32■■□□□ 1.16
EPCAM-203ENST00000419334 BBOX1O75936 387 aa22.32■■□□□ 1.16
EPCAM-203ENST00000419334 CC2D2BQ6DHV5 1058 aa22.32■■□□□ 1.16
EPCAM-203ENST00000419334 C9orf78Q9NZ63 289 aaPredicted RBP22.32■■□□□ 1.16
EPCAM-203ENST00000419334 UTYO14607 1347 aa22.31■■□□□ 1.16
EPCAM-203ENST00000419334 SNED1Q8TER0 1413 aa22.31■■□□□ 1.16
EPCAM-203ENST00000419334 LRRC37AA6NMS7 1700 aa22.31■■□□□ 1.16
EPCAM-203ENST00000419334 NFKBIEO00221 500 aa22.31■■□□□ 1.16
EPCAM-203ENST00000419334 CCT4P50991 539 aaKnown RBP22.31■■□□□ 1.16
EPCAM-203ENST00000419334 TTLL11Q8NHH1 800 aa22.31■■□□□ 1.16
EPCAM-203ENST00000419334 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
EPCAM-203ENST00000419334 COL4A1P02462 1669 aa22.3■■□□□ 1.16
EPCAM-203ENST00000419334 RTL9Q8NET4 1388 aa22.3■■□□□ 1.16
EPCAM-203ENST00000419334 RASSF7Q02833 373 aa22.3■■□□□ 1.16
EPCAM-203ENST00000419334 ATF7IPQ6VMQ6 1270 aa22.3■■□□□ 1.16
EPCAM-203ENST00000419334 TMC4Q7Z404 712 aa22.3■■□□□ 1.16
EPCAM-203ENST00000419334 FRAT1Q92837 279 aaPredicted RBP22.3■■□□□ 1.16
EPCAM-203ENST00000419334 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
EPCAM-203ENST00000419334 ATP6V0A2Q9Y487 856 aa22.3■■□□□ 1.16
EPCAM-203ENST00000419334 TRIM27P14373 513 aa22.29■■□□□ 1.16
EPCAM-203ENST00000419334 YY1P25490 414 aa22.29■■□□□ 1.16
EPCAM-203ENST00000419334 GRIPAP1Q4V328 841 aa22.29■■□□□ 1.16
EPCAM-203ENST00000419334 OLFM4Q6UX06 510 aa22.29■■□□□ 1.16
EPCAM-203ENST00000419334 RTKN2Q8IZC4 609 aa22.29■■□□□ 1.16
EPCAM-203ENST00000419334 CELF1Q92879 486 aaKnown RBP22.29■■□□□ 1.16
EPCAM-203ENST00000419334 DICER1Q9UPY3 1922 aaKnown RBP22.29■■□□□ 1.16
EPCAM-203ENST00000419334 CSF1RP07333 972 aa22.28■■□□□ 1.16
EPCAM-203ENST00000419334 ZKSCAN2Q63HK3 967 aa22.28■■□□□ 1.16
EPCAM-203ENST00000419334 TAOK3Q9H2K8 898 aa22.28■■□□□ 1.16
EPCAM-203ENST00000419334 SEC31BQ9NQW1 1179 aa22.28■■□□□ 1.16
EPCAM-203ENST00000419334 NBPF7P0C2Y1 421 aaPredicted RBP22.27■■□□□ 1.16
EPCAM-203ENST00000419334 INTS3Q68E01 1043 aaKnown RBP22.27■■□□□ 1.16
EPCAM-203ENST00000419334 SP8Q8IXZ3 490 aa22.27■■□□□ 1.16
EPCAM-203ENST00000419334 CCDC85AQ96PX6 553 aaPredicted RBP22.27■■□□□ 1.16
EPCAM-203ENST00000419334 USP44Q9H0E7 712 aa22.27■■□□□ 1.16
EPCAM-203ENST00000419334 GREM2Q9H772 168 aa22.27■■□□□ 1.16
EPCAM-203ENST00000419334 LMNB1P20700 586 aa22.26■■□□□ 1.15
EPCAM-203ENST00000419334 RPS8P62241 208 aaKnown RBP22.26■■□□□ 1.15
EPCAM-203ENST00000419334 FOXO4P98177 505 aa22.26■■□□□ 1.15
EPCAM-203ENST00000419334 FKBP4Q02790 459 aaKnown RBP eCLIP22.26■■□□□ 1.15
EPCAM-203ENST00000419334 TMX4Q9H1E5 349 aaPredicted RBP22.26■■□□□ 1.15
EPCAM-203ENST00000419334 SPEF2Q9C093 1822 aa22.26■■□□□ 1.15
EPCAM-203ENST00000419334 PRELPP51888 382 aa22.25■■□□□ 1.15
EPCAM-203ENST00000419334 C9orf131Q5VYM1 1079 aa22.25■■□□□ 1.15
EPCAM-203ENST00000419334 SLC51AQ86UW1 340 aa22.25■■□□□ 1.15
EPCAM-203ENST00000419334 CDC5LQ99459 802 aaKnown RBP22.25■■□□□ 1.15
EPCAM-203ENST00000419334 PSMD1Q99460 953 aa22.25■■□□□ 1.15
EPCAM-203ENST00000419334 TIAM2Q8IVF5 1701 aa22.24■■□□□ 1.15
EPCAM-203ENST00000419334 EPHA10Q5JZY3 1008 aa22.24■■□□□ 1.15
EPCAM-203ENST00000419334 SUCLG2Q96I99 432 aa22.24■■□□□ 1.15
EPCAM-203ENST00000419334 RNF181Q9P0P0 153 aa22.24■■□□□ 1.15
EPCAM-203ENST00000419334 RCAN3Q9UKA8 241 aa22.24■■□□□ 1.15
EPCAM-203ENST00000419334 TNNQ9UQP3 1299 aa22.24■■□□□ 1.15
EPCAM-203ENST00000419334 FAM161AQ3B820 660 aa22.23■■□□□ 1.15
EPCAM-203ENST00000419334 ANKRD18AQ8IVF6 992 aa22.23■■□□□ 1.15
EPCAM-203ENST00000419334 KAZALD1Q96I82 304 aa22.23■■□□□ 1.15
EPCAM-203ENST00000419334 LTBP1Q14766 1721 aa22.23■■□□□ 1.15
EPCAM-203ENST00000419334 ITGA6P23229 1130 aa22.22■■□□□ 1.15
EPCAM-203ENST00000419334 CLUAP1Q96AJ1 413 aa22.22■■□□□ 1.15
EPCAM-203ENST00000419334 LMBR1LQ6UX01 489 aa22.21■■□□□ 1.15
EPCAM-203ENST00000419334 ZC3H4Q9UPT8 1303 aaKnown RBP22.21■■□□□ 1.15
EPCAM-203ENST00000419334 RABL6Q3YEC7 729 aaPredicted RBP22.2■■□□□ 1.14
EPCAM-203ENST00000419334 MPNDQ8N594 471 aa22.2■■□□□ 1.14
EPCAM-203ENST00000419334 DUOX1Q9NRD9 1551 aa22.2■■□□□ 1.14
EPCAM-203ENST00000419334 ANKRD18BA2A2Z9 1011 aa22.19■■□□□ 1.14
EPCAM-203ENST00000419334 UBTFL1P0CB47 393 aaPredicted RBP22.19■■□□□ 1.14
EPCAM-203ENST00000419334 DPP8Q6V1X1 898 aaPredicted RBP22.19■■□□□ 1.14
EPCAM-203ENST00000419334 FTSJ3Q8IY81 847 aaKnown RBP22.19■■□□□ 1.14
EPCAM-203ENST00000419334 DZIP1LQ8IYY4 767 aaKnown RBP22.19■■□□□ 1.14
EPCAM-203ENST00000419334 RTFDC1Q9BY42 306 aaPredicted RBP22.19■■□□□ 1.14
EPCAM-203ENST00000419334 BICC1Q9H694 974 aaKnown RBP22.19■■□□□ 1.14
EPCAM-203ENST00000419334 BSDC1Q9NW68 430 aaPredicted RBP22.19■■□□□ 1.14
EPCAM-203ENST00000419334 IGHMBP2P38935 993 aaKnown RBP22.18■■□□□ 1.14
EPCAM-203ENST00000419334 IARSP41252 1262 aaKnown RBP22.18■■□□□ 1.14
EPCAM-203ENST00000419334 IFIT5Q13325 482 aaKnown RBP22.18■■□□□ 1.14
EPCAM-203ENST00000419334 TMEM57Q8N5G2 664 aa22.18■■□□□ 1.14
EPCAM-203ENST00000419334 SUPT20HQ8NEM7 779 aa22.18■■□□□ 1.14
EPCAM-203ENST00000419334 ZNF277Q9NRM2 450 aaPredicted RBP22.18■■□□□ 1.14
EPCAM-203ENST00000419334 CHMP3Q9Y3E7 222 aa22.18■■□□□ 1.14
EPCAM-203ENST00000419334 ANKRD44Q8N8A2 993 aa22.17■■□□□ 1.14
EPCAM-203ENST00000419334 MEIS3Q99687 375 aa22.17■■□□□ 1.14
EPCAM-203ENST00000419334 VPS33BQ9H267 617 aa22.17■■□□□ 1.14
EPCAM-203ENST00000419334 HDAC5Q9UQL6 1122 aa22.17■■□□□ 1.14
EPCAM-203ENST00000419334 GNAI3P08754 354 aa22.16■■□□□ 1.14
EPCAM-203ENST00000419334 GPSM2P81274 684 aa22.16■■□□□ 1.14
EPCAM-203ENST00000419334 CCDC57Q2TAC2 916 aa22.16■■□□□ 1.14
EPCAM-203ENST00000419334 PODXL2Q9NZ53 605 aa22.16■■□□□ 1.14
EPCAM-203ENST00000419334 NSFL1CQ9UNZ2 370 aaKnown RBP22.16■■□□□ 1.14
EPCAM-203ENST00000419334 A0A1B0GUL6 1792 aa22.15■■□□□ 1.14
EPCAM-203ENST00000419334 MS4A1P11836 297 aa22.15■■□□□ 1.14
EPCAM-203ENST00000419334 RLBP1P12271 317 aa22.15■■□□□ 1.14
EPCAM-203ENST00000419334 MPHOSPH8Q99549 860 aa22.15■■□□□ 1.14
EPCAM-203ENST00000419334 ZNF784Q8NCA9 323 aaPredicted RBP22.14■■□□□ 1.13
EPCAM-203ENST00000419334 COL4A5P29400 1685 aa22.14■■□□□ 1.13
EPCAM-203ENST00000419334 XDHP47989 1333 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms