RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 NEURL1BA8MQ27 555 aa25.96■■□□□ 1.75
GTF3A-202ENST00000419181 IARSP41252 1262 aaKnown RBP25.96■■□□□ 1.75
GTF3A-202ENST00000419181 C16orf71Q8IYS4 520 aaPredicted RBP25.96■■□□□ 1.75
GTF3A-202ENST00000419181 DNAAF4Q8WXU2 420 aa25.96■■□□□ 1.75
GTF3A-202ENST00000419181 CDHR2Q9BYE9 1310 aa25.95■■□□□ 1.75
GTF3A-202ENST00000419181 WDR90Q96KV7 1748 aa25.95■■□□□ 1.74
GTF3A-202ENST00000419181 TOMM70O94826 608 aa25.95■■□□□ 1.74
GTF3A-202ENST00000419181 DPY19L2Q6NUT2 758 aa25.95■■□□□ 1.74
GTF3A-202ENST00000419181 SP8Q8IXZ3 490 aa25.95■■□□□ 1.74
GTF3A-202ENST00000419181 JARID2Q92833 1246 aaPredicted RBP25.95■■□□□ 1.74
GTF3A-202ENST00000419181 TMX4Q9H1E5 349 aaPredicted RBP25.95■■□□□ 1.74
GTF3A-202ENST00000419181 TMC4Q7Z404 712 aa25.94■■□□□ 1.74
GTF3A-202ENST00000419181 CDCA7LQ96GN5 454 aa25.94■■□□□ 1.74
GTF3A-202ENST00000419181 RRAGCQ9HB90 399 aa25.94■■□□□ 1.74
GTF3A-202ENST00000419181 MYH3P11055 1940 aa25.93■■□□□ 1.74
GTF3A-202ENST00000419181 PDE8AO60658 829 aa25.93■■□□□ 1.74
GTF3A-202ENST00000419181 CELF1Q92879 486 aaKnown RBP25.93■■□□□ 1.74
GTF3A-202ENST00000419181 COL4A5P29400 1685 aa25.93■■□□□ 1.74
GTF3A-202ENST00000419181 TRMT2AQ8IZ69 625 aaKnown RBP25.92■■□□□ 1.74
GTF3A-202ENST00000419181 LINS1Q8NG48 757 aa25.92■■□□□ 1.74
GTF3A-202ENST00000419181 HSPA6P17066 643 aa25.91■■□□□ 1.74
GTF3A-202ENST00000419181 GCKRQ14397 625 aa25.91■■□□□ 1.74
GTF3A-202ENST00000419181 F6X3S4 739 aa25.9■■□□□ 1.74
GTF3A-202ENST00000419181 H7C1W4 665 aa25.9■■□□□ 1.74
GTF3A-202ENST00000419181 CCDC152Q4G0S7 254 aa25.9■■□□□ 1.74
GTF3A-202ENST00000419181 RTFDC1Q9BY42 306 aaPredicted RBP25.9■■□□□ 1.74
GTF3A-202ENST00000419181 DUOX1Q9NRD9 1551 aa25.9■■□□□ 1.74
GTF3A-202ENST00000419181 FZD9O00144 591 aa25.89■■□□□ 1.74
GTF3A-202ENST00000419181 UBE3BQ7Z3V4 1068 aa25.89■■□□□ 1.74
GTF3A-202ENST00000419181 ZNF541Q9H0D2 1346 aa25.88■■□□□ 1.73
GTF3A-202ENST00000419181 POTECB2RU33 542 aa25.88■■□□□ 1.73
GTF3A-202ENST00000419181 DDNO94850 711 aaPredicted RBP25.88■■□□□ 1.73
GTF3A-202ENST00000419181 VEGFAP15692 232 aaPredicted RBP25.88■■□□□ 1.73
GTF3A-202ENST00000419181 DPP8Q6V1X1 898 aaPredicted RBP25.88■■□□□ 1.73
GTF3A-202ENST00000419181 MPNDQ8N594 471 aa25.88■■□□□ 1.73
GTF3A-202ENST00000419181 JDP2Q8WYK2 163 aa25.88■■□□□ 1.73
GTF3A-202ENST00000419181 SEC31BQ9NQW1 1179 aa25.88■■□□□ 1.73
GTF3A-202ENST00000419181 CTSWP56202 376 aa25.87■■□□□ 1.73
GTF3A-202ENST00000419181 RPS8P62241 208 aaKnown RBP25.87■■□□□ 1.73
GTF3A-202ENST00000419181 BEND3Q5T5X7 828 aa25.87■■□□□ 1.73
GTF3A-202ENST00000419181 LARGE2Q8N3Y3 721 aa25.87■■□□□ 1.73
GTF3A-202ENST00000419181 SUPT20HQ8NEM7 779 aa25.87■■□□□ 1.73
GTF3A-202ENST00000419181 RBM46Q8TBY0 533 aaKnown RBP25.87■■□□□ 1.73
GTF3A-202ENST00000419181 VPS33BQ9H267 617 aa25.87■■□□□ 1.73
GTF3A-202ENST00000419181 LTBP1Q14766 1721 aa25.87■■□□□ 1.73
GTF3A-202ENST00000419181 CASP7P55210 303 aa25.86■■□□□ 1.73
GTF3A-202ENST00000419181 MRPL50Q8N5N7 158 aaKnown RBP25.86■■□□□ 1.73
GTF3A-202ENST00000419181 TTLL11Q8NHH1 800 aa25.85■■□□□ 1.73
GTF3A-202ENST00000419181 CCDC85AQ96PX6 553 aaPredicted RBP25.85■■□□□ 1.73
GTF3A-202ENST00000419181 PPIP5K2O43314 1243 aa25.84■■□□□ 1.73
GTF3A-202ENST00000419181 AOC3Q16853 763 aa25.84■■□□□ 1.73
GTF3A-202ENST00000419181 SSH1Q8WYL5 1049 aa25.84■■□□□ 1.73
GTF3A-202ENST00000419181 L3MBTL3Q96JM7 780 aaPredicted RBP25.84■■□□□ 1.73
GTF3A-202ENST00000419181 PLA2G12BQ9BX93 195 aa25.84■■□□□ 1.73
GTF3A-202ENST00000419181 SCN4AP35499 1836 aa25.84■■□□□ 1.73
GTF3A-202ENST00000419181 RTL9Q8NET4 1388 aa25.83■■□□□ 1.73
GTF3A-202ENST00000419181 KIAA2012Q0VF49 1180 aa25.81■■□□□ 1.72
GTF3A-202ENST00000419181 FSTL1Q12841 308 aa25.81■■□□□ 1.72
GTF3A-202ENST00000419181 NIM1KQ8IY84 436 aa25.81■■□□□ 1.72
GTF3A-202ENST00000419181 GPC2Q8N158 579 aa25.81■■□□□ 1.72
GTF3A-202ENST00000419181 GREM2Q9H772 168 aa25.81■■□□□ 1.72
GTF3A-202ENST00000419181 NSFL1CQ9UNZ2 370 aaKnown RBP25.81■■□□□ 1.72
GTF3A-202ENST00000419181 SPEF2Q9C093 1822 aa25.8■■□□□ 1.72
GTF3A-202ENST00000419181 CT47B1P0C2W7 299 aaPredicted RBP25.8■■□□□ 1.72
GTF3A-202ENST00000419181 EIF6P56537 245 aaKnown RBP25.8■■□□□ 1.72
GTF3A-202ENST00000419181 GPSM2P81274 684 aa25.8■■□□□ 1.72
GTF3A-202ENST00000419181 ALDH1L2Q3SY69 923 aa25.8■■□□□ 1.72
GTF3A-202ENST00000419181 PTPRCP08575 1304 aa25.8■■□□□ 1.72
GTF3A-202ENST00000419181 ALDH1L1O75891 902 aa25.79■■□□□ 1.72
GTF3A-202ENST00000419181 APLP1P51693 650 aa25.79■■□□□ 1.72
GTF3A-202ENST00000419181 ANKRD18AQ8IVF6 992 aa25.79■■□□□ 1.72
GTF3A-202ENST00000419181 CDC5LQ99459 802 aaKnown RBP25.79■■□□□ 1.72
GTF3A-202ENST00000419181 BCL2L13Q9BXK5 485 aa25.79■■□□□ 1.72
GTF3A-202ENST00000419181 IQCA1LA6NCM1 817 aa25.78■■□□□ 1.72
GTF3A-202ENST00000419181 SLC4A10Q6U841 1118 aa25.78■■□□□ 1.72
GTF3A-202ENST00000419181 SMC1BQ8NDV3 1235 aa25.78■■□□□ 1.72
GTF3A-202ENST00000419181 SRCIN1Q9C0H9 1055 aa25.78■■□□□ 1.72
GTF3A-202ENST00000419181 PODXL2Q9NZ53 605 aa25.78■■□□□ 1.72
GTF3A-202ENST00000419181 GRM8O00222 908 aa25.77■■□□□ 1.72
GTF3A-202ENST00000419181 CSF1RP07333 972 aa25.77■■□□□ 1.72
GTF3A-202ENST00000419181 POLLQ9UGP5 575 aa25.77■■□□□ 1.72
GTF3A-202ENST00000419181 ZNRF3Q9ULT6 936 aa25.77■■□□□ 1.72
GTF3A-202ENST00000419181 CEP350Q5VT06 3117 aa25.76■■□□□ 1.71
GTF3A-202ENST00000419181 SMC4Q9NTJ3 1288 aa25.76■■□□□ 1.71
GTF3A-202ENST00000419181 WASHC4Q2M389 1173 aa25.75■■□□□ 1.71
GTF3A-202ENST00000419181 FAM161AQ3B820 660 aa25.75■■□□□ 1.71
GTF3A-202ENST00000419181 TBC1D16Q8TBP0 767 aa25.75■■□□□ 1.71
GTF3A-202ENST00000419181 C6orf229H3BNL8 230 aa25.74■■□□□ 1.71
GTF3A-202ENST00000419181 FOXO4P98177 505 aa25.74■■□□□ 1.71
GTF3A-202ENST00000419181 HNRNPUQ00839 825 aaKnown RBP eCLIP25.74■■□□□ 1.71
GTF3A-202ENST00000419181 TAF1DQ9H5J8 278 aaPredicted RBP25.74■■□□□ 1.71
GTF3A-202ENST00000419181 BSDC1Q9NW68 430 aaPredicted RBP25.74■■□□□ 1.71
GTF3A-202ENST00000419181 ANKIB1Q9P2G1 1089 aa25.74■■□□□ 1.71
GTF3A-202ENST00000419181 GJA3Q9Y6H8 435 aa25.74■■□□□ 1.71
GTF3A-202ENST00000419181 ITGA6P23229 1130 aa25.73■■□□□ 1.71
GTF3A-202ENST00000419181 C9orf78Q9NZ63 289 aaPredicted RBP25.73■■□□□ 1.71
GTF3A-202ENST00000419181 HACL1Q9UJ83 578 aa25.73■■□□□ 1.71
GTF3A-202ENST00000419181 XDHP47989 1333 aa25.72■■□□□ 1.71
GTF3A-202ENST00000419181 CXCL9Q07325 125 aa25.72■■□□□ 1.71
GTF3A-202ENST00000419181 EYA3Q99504 573 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms