RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 CDC37L1Q7L3B6 337 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 CABLES1Q8TDN4 633 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 DBNLQ9UJU6 430 aaKnown RBP13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 KIF3AQ9Y496 699 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 LMBR1LQ6UX01 489 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 DDX46Q7L014 1031 aaKnown RBP13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 UQCRHLA0A096LP55 91 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 TAF5LO75529 589 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 UQCRHP07919 91 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 MCMDC2Q4G0Z9 681 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 TNMDQ9H2S6 317 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 FAM13BQ9NYF5 915 aa13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 TFIP11Q9UBB9 837 aaKnown RBP13.86□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 KDM4AO75164 1064 aa13.85□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 CAMK4Q16566 473 aa13.85□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 FAM173BQ6P4H8 233 aa13.85□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 DBNDD2Q9BQY9 259 aa13.85□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 NDUFB9Q9Y6M9 179 aa13.85□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 LMO7Q8WWI1 1683 aa13.85□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.85□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 CHD2O14647 1828 aaKnown RBP13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 GORABQ5T7V8 394 aa13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 DRC7Q8IY82 874 aa13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 DDX17Q92841 729 aaKnown RBP13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 ZNF830Q96NB3 372 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 ZNF330Q9Y3S2 320 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 PLBD2Q8NHP8 589 aa13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 DDX11Q96FC9 970 aa13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 TTC6Q86TZ1 520 aa13.84□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 CCDC129Q6ZRS4 1044 aa13.83□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 Q6ZUG5 572 aa13.83□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 GOLIM4O00461 696 aa13.83□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 SASS6Q6UVJ0 657 aa13.83□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TTC12Q9H892 705 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 MED23Q9ULK4 1368 aa13.83□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TPM3P06753 285 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 BRF1Q92994 677 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 SNRKQ9NRH2 765 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CWC25Q9NXE8 425 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 C1orf167Q5SNV9 1468 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 RGPD2P0DJD1 1756 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CKAP2LQ8IYA6 745 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 DDX19AQ9NUU7 478 aaKnown RBP13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 DACT1Q9NYF0 836 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 SLIT3O75094 1523 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 SPC24Q8NBT2 197 aa13.82□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CYP27B1O15528 508 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 ST3GAL1Q11201 340 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CHAF1AQ13111 956 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TOB2Q14106 344 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 SEC62Q99442 399 aaKnown RBP13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 HAUS7Q99871 368 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 LRRC2Q9BYS8 371 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 ELP1O95163 1332 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 LRRFIP1Q32MZ4 808 aaKnown RBP13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TSGA10IPQ3SY00 556 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 KBTBD3Q8NAB2 608 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 FAM200AQ8TCP9 573 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CHMP4CQ96CF2 233 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 ALDH8A1Q9H2A2 487 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 FOSBP53539 338 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TAF7LQ5H9L4 462 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TOM1L2Q6ZVM7 507 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 GTF3C6Q969F1 213 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 PDCL3Q9H2J4 239 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TAF6LQ9Y6J9 622 aa13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 UBE2Q2Q8WVN8 375 aa13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 PAG1Q9NWQ8 432 aa13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 JAK2O60674 1132 aa13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 PRKCSHP14314 528 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CEBPZQ03701 1054 aaKnown RBP13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 NOLC1Q14978 699 aaKnown RBP eCLIP13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 RABL6Q3YEC7 729 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CADPS2Q86UW7 1296 aa13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 ZSCAN16Q9H4T2 348 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 ZBTB3Q9H5J0 574 aa13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 IFIT1P09914 478 aaKnown RBP13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 LIG1P18858 919 aa13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TYRO3Q06418 890 aa13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 LEO1Q8WVC0 666 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 PRDM11Q9NQV5 511 aa13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TCHHQ07283 1943 aa13.8□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 RFX5P48382 616 aaPredicted RBP13.79□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 TIMM10P62072 90 aa13.79□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 MAP7D2Q96T17 732 aa13.79□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CYP21A2P08686 494 aa13.79□□□□□ -0.2
CSPG4P3Y-201ENST00000418188 CEP126Q9P2H0 1117 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms