RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 RTFDC1Q9BY42 306 aaPredicted RBP18.73■□□□□ 0.59
TTC38-202ENST00000417709 MCOLN1Q9GZU1 580 aa18.73■□□□□ 0.59
TTC38-202ENST00000417709 PGAP2Q9UHJ9 254 aa18.73■□□□□ 0.59
TTC38-202ENST00000417709 CNOT7Q9UIV1 285 aaKnown RBP18.73■□□□□ 0.59
TTC38-202ENST00000417709 POLR2AP24928 1970 aaKnown RBP18.73■□□□□ 0.59
TTC38-202ENST00000417709 PDE4DIPQ5VU43 2346 aa18.72■□□□□ 0.59
TTC38-202ENST00000417709 IBTKQ9P2D0 1353 aaPredicted RBP18.72■□□□□ 0.59
TTC38-202ENST00000417709 AIMP1Q12904 312 aaKnown RBP18.72■□□□□ 0.59
TTC38-202ENST00000417709 PDIA6Q15084 440 aa18.72■□□□□ 0.59
TTC38-202ENST00000417709 DLK2Q6UY11 383 aa18.72■□□□□ 0.59
TTC38-202ENST00000417709 USP48Q86UV5 1035 aa18.72■□□□□ 0.59
TTC38-202ENST00000417709 NECTIN2Q92692 538 aa18.72■□□□□ 0.59
TTC38-202ENST00000417709 RIC1Q4ADV7 1423 aa18.72■□□□□ 0.59
TTC38-202ENST00000417709 KDM3BQ7LBC6 1761 aa18.71■□□□□ 0.59
TTC38-202ENST00000417709 SHTN1A0MZ66 631 aa18.71■□□□□ 0.59
TTC38-202ENST00000417709 PROSER3Q2NL68 480 aa18.71■□□□□ 0.59
TTC38-202ENST00000417709 DDX46Q7L014 1031 aaKnown RBP18.71■□□□□ 0.59
TTC38-202ENST00000417709 CDC37L1Q7L3B6 337 aa18.71■□□□□ 0.59
TTC38-202ENST00000417709 ZIC5Q96T25 663 aa18.71■□□□□ 0.59
TTC38-202ENST00000417709 TSPYL4Q9UJ04 414 aa18.71■□□□□ 0.59
TTC38-202ENST00000417709 H7C1D1 291 aa18.7■□□□□ 0.58
TTC38-202ENST00000417709 CA12O43570 354 aa18.7■□□□□ 0.58
TTC38-202ENST00000417709 TAF1P21675 1872 aa18.7■□□□□ 0.58
TTC38-202ENST00000417709 KIAA2012Q0VF49 1180 aa18.7■□□□□ 0.58
TTC38-202ENST00000417709 DGKZQ13574 1117 aa18.7■□□□□ 0.58
TTC38-202ENST00000417709 TRPM4Q8TD43 1214 aa18.7■□□□□ 0.58
TTC38-202ENST00000417709 ZC3H15Q8WU90 426 aaKnown RBP18.7■□□□□ 0.58
TTC38-202ENST00000417709 BRPF1P55201 1214 aaPredicted RBP18.69■□□□□ 0.58
TTC38-202ENST00000417709 COPS6Q7L5N1 327 aa18.69■□□□□ 0.58
TTC38-202ENST00000417709 LRP10Q7Z4F1 713 aa18.69■□□□□ 0.58
TTC38-202ENST00000417709 TRMT112Q9UI30 125 aaKnown RBP18.69■□□□□ 0.58
TTC38-202ENST00000417709 ERBB4Q15303 1308 aa18.69■□□□□ 0.58
TTC38-202ENST00000417709 HUNKP57058 714 aa18.68■□□□□ 0.58
TTC38-202ENST00000417709 NLRP10Q86W26 655 aa18.68■□□□□ 0.58
TTC38-202ENST00000417709 HHIPL1Q96JK4 782 aa18.68■□□□□ 0.58
TTC38-202ENST00000417709 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
TTC38-202ENST00000417709 ZBTB12Q9Y330 459 aaPredicted RBP18.68■□□□□ 0.58
TTC38-202ENST00000417709 MAPK8IP3Q9UPT6 1336 aa18.68■□□□□ 0.58
TTC38-202ENST00000417709 YDJCA8MPS7 323 aa18.67■□□□□ 0.58
TTC38-202ENST00000417709 SAMD7Q7Z3H4 446 aa18.67■□□□□ 0.58
TTC38-202ENST00000417709 XAGE3Q8WTP9 111 aa18.67■□□□□ 0.58
TTC38-202ENST00000417709 THSD7BQ9C0I4 1608 aa18.67■□□□□ 0.58
TTC38-202ENST00000417709 RIMBP2O15034 1052 aa18.66■□□□□ 0.58
TTC38-202ENST00000417709 RIPK4P57078 832 aa18.66■□□□□ 0.58
TTC38-202ENST00000417709 TCIRG1Q13488 830 aa18.66■□□□□ 0.58
TTC38-202ENST00000417709 GRAPQ13588 217 aa18.66■□□□□ 0.58
TTC38-202ENST00000417709 RBM26Q5T8P6 1007 aaKnown RBP18.66■□□□□ 0.58
TTC38-202ENST00000417709 MICALL2Q8IY33 904 aa18.66■□□□□ 0.58
TTC38-202ENST00000417709 GRAPLQ8TC17 118 aaPredicted RBP18.66■□□□□ 0.58
TTC38-202ENST00000417709 NOGQ13253 232 aa18.65■□□□□ 0.58
TTC38-202ENST00000417709 WASHC4Q2M389 1173 aa18.65■□□□□ 0.58
TTC38-202ENST00000417709 TBC1D10BQ4KMP7 808 aaPredicted RBP18.65■□□□□ 0.58
TTC38-202ENST00000417709 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
TTC38-202ENST00000417709 NSFL1CQ9UNZ2 370 aaKnown RBP18.65■□□□□ 0.58
TTC38-202ENST00000417709 KCNQ5Q9NR82 932 aa18.64■□□□□ 0.57
TTC38-202ENST00000417709 CDHR2Q9BYE9 1310 aa18.64■□□□□ 0.57
TTC38-202ENST00000417709 LAMB2P55268 1798 aa18.63■□□□□ 0.57
TTC38-202ENST00000417709 C6orf229H3BNL8 230 aa18.63■□□□□ 0.57
TTC38-202ENST00000417709 PSMD14O00487 310 aa18.63■□□□□ 0.57
TTC38-202ENST00000417709 KRT26Q7Z3Y9 468 aa18.63■□□□□ 0.57
TTC38-202ENST00000417709 DBNDD1Q9H9R9 158 aa18.63■□□□□ 0.57
TTC38-202ENST00000417709 SH3TC1Q8TE82 1336 aa18.63■□□□□ 0.57
TTC38-202ENST00000417709 DOK7Q18PE1 504 aa18.62■□□□□ 0.57
TTC38-202ENST00000417709 C2orf69Q8N8R5 385 aa18.62■□□□□ 0.57
TTC38-202ENST00000417709 DPF2Q92785 391 aa18.62■□□□□ 0.57
TTC38-202ENST00000417709 ANKRD36CQ5JPF3 1778 aa18.61■□□□□ 0.57
TTC38-202ENST00000417709 EGFRP00533 1210 aa18.61■□□□□ 0.57
TTC38-202ENST00000417709 KIF23Q02241 960 aaPredicted RBP18.61■□□□□ 0.57
TTC38-202ENST00000417709 RGMBQ6NW40 437 aa18.61■□□□□ 0.57
TTC38-202ENST00000417709 FAM89AQ96GI7 184 aa18.61■□□□□ 0.57
TTC38-202ENST00000417709 TRPA1O75762 1119 aa18.6■□□□□ 0.57
TTC38-202ENST00000417709 ZNF157P51786 506 aaPredicted RBP18.6■□□□□ 0.57
TTC38-202ENST00000417709 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
TTC38-202ENST00000417709 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
TTC38-202ENST00000417709 TMC4Q7Z404 712 aa18.6■□□□□ 0.57
TTC38-202ENST00000417709 CELF1Q92879 486 aaKnown RBP18.6■□□□□ 0.57
TTC38-202ENST00000417709 DCPSQ96C86 337 aaKnown RBP18.6■□□□□ 0.57
TTC38-202ENST00000417709 GBA2Q9HCG7 927 aaPredicted RBP18.6■□□□□ 0.57
TTC38-202ENST00000417709 POLLQ9UGP5 575 aa18.6■□□□□ 0.57
TTC38-202ENST00000417709 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
TTC38-202ENST00000417709 FAM155AB1AL88 458 aaPredicted RBP18.59■□□□□ 0.57
TTC38-202ENST00000417709 ADM5C9JUS6 153 aa18.59■□□□□ 0.57
TTC38-202ENST00000417709 ATP5J2-PTCD1G3V325 749 aa18.59■□□□□ 0.57
TTC38-202ENST00000417709 GPSM2P81274 684 aa18.59■□□□□ 0.57
TTC38-202ENST00000417709 KRT24Q2M2I5 525 aa18.59■□□□□ 0.57
TTC38-202ENST00000417709 CCDC102AQ96A19 550 aa18.59■□□□□ 0.57
TTC38-202ENST00000417709 BABAM1Q9NWV8 329 aa18.59■□□□□ 0.57
TTC38-202ENST00000417709 ECE2O60344 883 aa18.57■□□□□ 0.56
TTC38-202ENST00000417709 TMPOP42166 694 aaKnown RBP18.57■□□□□ 0.56
TTC38-202ENST00000417709 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
TTC38-202ENST00000417709 RNF186Q9NXI6 227 aa18.57■□□□□ 0.56
TTC38-202ENST00000417709 CHPF2Q9P2E5 772 aa18.57■□□□□ 0.56
TTC38-202ENST00000417709 G3V3G9 751 aa18.56■□□□□ 0.56
TTC38-202ENST00000417709 SF3B3Q15393 1217 aaKnown RBP18.56■□□□□ 0.56
TTC38-202ENST00000417709 DCAF8Q5TAQ9 597 aa18.56■□□□□ 0.56
TTC38-202ENST00000417709 AKAP11Q9UKA4 1901 aa18.56■□□□□ 0.56
TTC38-202ENST00000417709 RPS12P25398 132 aaKnown RBP18.55■□□□□ 0.56
TTC38-202ENST00000417709 SOX10P56693 466 aa18.55■□□□□ 0.56
TTC38-202ENST00000417709 RPS8P62241 208 aaKnown RBP18.55■□□□□ 0.56
TTC38-202ENST00000417709 PLBD2Q8NHP8 589 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms