RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 CREBZFQ9NS37 354 aa23.77■■□□□ 1.4
VPS16-204ENST00000417508 LMOD1P29536 600 aaPredicted RBP23.76■■□□□ 1.39
VPS16-204ENST00000417508 EAPPQ56P03 285 aaPredicted RBP23.76■■□□□ 1.39
VPS16-204ENST00000417508 ZBTB38Q8NAP3 1195 aaPredicted RBP23.76■■□□□ 1.39
VPS16-204ENST00000417508 CCDC191Q8NCU4 936 aa23.76■■□□□ 1.39
VPS16-204ENST00000417508 MRS2Q9HD23 443 aa23.76■■□□□ 1.39
VPS16-204ENST00000417508 CLEC11AQ9Y240 323 aa23.76■■□□□ 1.39
VPS16-204ENST00000417508 GJA3Q9Y6H8 435 aa23.76■■□□□ 1.39
VPS16-204ENST00000417508 IL16Q14005 1332 aa23.76■■□□□ 1.39
VPS16-204ENST00000417508 IRS4O14654 1257 aaPredicted RBP23.75■■□□□ 1.39
VPS16-204ENST00000417508 ZNRF3Q9ULT6 936 aa23.75■■□□□ 1.39
VPS16-204ENST00000417508 AOC3Q16853 763 aa23.74■■□□□ 1.39
VPS16-204ENST00000417508 PASKQ96RG2 1323 aa23.74■■□□□ 1.39
VPS16-204ENST00000417508 COL4A5P29400 1685 aa23.73■■□□□ 1.39
VPS16-204ENST00000417508 ITGBL1O95965 494 aaPredicted RBP23.73■■□□□ 1.39
VPS16-204ENST00000417508 KIAA2012Q0VF49 1180 aa23.73■■□□□ 1.39
VPS16-204ENST00000417508 DDX60Q8IY21 1712 aaKnown RBP23.73■■□□□ 1.39
VPS16-204ENST00000417508 SLC51AQ86UW1 340 aa23.72■■□□□ 1.39
VPS16-204ENST00000417508 TSPYL6Q8N831 410 aa23.72■■□□□ 1.39
VPS16-204ENST00000417508 MYD88Q99836 296 aa23.72■■□□□ 1.39
VPS16-204ENST00000417508 METTL22Q9BUU2 404 aaPredicted RBP23.72■■□□□ 1.39
VPS16-204ENST00000417508 STK31Q9BXU1 1019 aa23.72■■□□□ 1.39
VPS16-204ENST00000417508 TAF1P21675 1872 aa23.71■■□□□ 1.39
VPS16-204ENST00000417508 PCCAP05165 728 aaPredicted RBP23.71■■□□□ 1.39
VPS16-204ENST00000417508 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.38
VPS16-204ENST00000417508 RTL5Q5HYW3 569 aaPredicted RBP23.7■■□□□ 1.38
VPS16-204ENST00000417508 IFFO2Q5TF58 517 aa23.7■■□□□ 1.38
VPS16-204ENST00000417508 KSR2Q6VAB6 950 aa23.7■■□□□ 1.38
VPS16-204ENST00000417508 TSR2Q969E8 191 aaKnown RBP23.7■■□□□ 1.38
VPS16-204ENST00000417508 ZNF428Q96B54 188 aa23.7■■□□□ 1.38
VPS16-204ENST00000417508 CWC25Q9NXE8 425 aaPredicted RBP23.7■■□□□ 1.38
VPS16-204ENST00000417508 SCNN1DP51172 638 aa23.69■■□□□ 1.38
VPS16-204ENST00000417508 CXCL9Q07325 125 aa23.69■■□□□ 1.38
VPS16-204ENST00000417508 TNIP1Q15025 636 aa23.69■■□□□ 1.38
VPS16-204ENST00000417508 TWISTNBQ3B726 338 aaPredicted RBP23.69■■□□□ 1.38
VPS16-204ENST00000417508 USP50Q70EL3 339 aaPredicted RBP23.69■■□□□ 1.38
VPS16-204ENST00000417508 CNTROBQ8N137 903 aa23.69■■□□□ 1.38
VPS16-204ENST00000417508 CELF1Q92879 486 aaKnown RBP23.69■■□□□ 1.38
VPS16-204ENST00000417508 ADAMTSL1Q8N6G6 1762 aa23.69■■□□□ 1.38
VPS16-204ENST00000417508 TMEM88BA6NKF7 163 aa23.68■■□□□ 1.38
VPS16-204ENST00000417508 EPS15P42566 896 aa23.68■■□□□ 1.38
VPS16-204ENST00000417508 WDR63Q8IWG1 891 aa23.68■■□□□ 1.38
VPS16-204ENST00000417508 NSFL1CQ9UNZ2 370 aaKnown RBP23.68■■□□□ 1.38
VPS16-204ENST00000417508 PDE8AO60658 829 aa23.67■■□□□ 1.38
VPS16-204ENST00000417508 CIAPIN1Q6FI81 312 aa23.67■■□□□ 1.38
VPS16-204ENST00000417508 MAP3K2Q9Y2U5 619 aa23.67■■□□□ 1.38
VPS16-204ENST00000417508 CDHR2Q9BYE9 1310 aa23.66■■□□□ 1.38
VPS16-204ENST00000417508 NEXNQ0ZGT2 675 aa23.66■■□□□ 1.38
VPS16-204ENST00000417508 WASHC4Q2M389 1173 aa23.66■■□□□ 1.38
VPS16-204ENST00000417508 CCDC152Q4G0S7 254 aa23.66■■□□□ 1.38
VPS16-204ENST00000417508 GPRC5DQ9NZD1 345 aa23.66■■□□□ 1.38
VPS16-204ENST00000417508 LRRC37AA6NMS7 1700 aa23.66■■□□□ 1.38
VPS16-204ENST00000417508 CACNA1FO60840 1977 aa23.65■■□□□ 1.38
VPS16-204ENST00000417508 PI4KAP2A4QPH2 592 aa23.65■■□□□ 1.38
VPS16-204ENST00000417508 MAP1SQ66K74 1059 aaPredicted RBP23.65■■□□□ 1.38
VPS16-204ENST00000417508 PI4KAP1Q8N8J0 262 aa23.65■■□□□ 1.38
VPS16-204ENST00000417508 EYA3Q99504 573 aa23.65■■□□□ 1.38
VPS16-204ENST00000417508 ADARB2Q9NS39 739 aaKnown RBP23.65■■□□□ 1.38
VPS16-204ENST00000417508 SLC4A2P04920 1241 aa23.64■■□□□ 1.37
VPS16-204ENST00000417508 C6orf229H3BNL8 230 aa23.63■■□□□ 1.37
VPS16-204ENST00000417508 LTBP1Q14766 1721 aa23.62■■□□□ 1.37
VPS16-204ENST00000417508 GPSM2P81274 684 aa23.62■■□□□ 1.37
VPS16-204ENST00000417508 BCL2L13Q9BXK5 485 aa23.62■■□□□ 1.37
VPS16-204ENST00000417508 PODXL2Q9NZ53 605 aa23.62■■□□□ 1.37
VPS16-204ENST00000417508 POLLQ9UGP5 575 aa23.62■■□□□ 1.37
VPS16-204ENST00000417508 MKRN1Q9UHC7 482 aaKnown RBP23.62■■□□□ 1.37
VPS16-204ENST00000417508 RAD17O75943 681 aa23.61■■□□□ 1.37
VPS16-204ENST00000417508 IGKV5-2P06315 115 aa23.61■■□□□ 1.37
VPS16-204ENST00000417508 GMPSP49915 693 aaPredicted RBP23.61■■□□□ 1.37
VPS16-204ENST00000417508 SEC31BQ9NQW1 1179 aa23.61■■□□□ 1.37
VPS16-204ENST00000417508 CNTNAP1P78357 1384 aa23.61■■□□□ 1.37
VPS16-204ENST00000417508 DUOX1Q9NRD9 1551 aa23.6■■□□□ 1.37
VPS16-204ENST00000417508 FANCIQ9NVI1 1328 aa23.59■■□□□ 1.37
VPS16-204ENST00000417508 YDJCA8MPS7 323 aa23.59■■□□□ 1.37
VPS16-204ENST00000417508 TBC1D16Q8TBP0 767 aa23.59■■□□□ 1.37
VPS16-204ENST00000417508 ZC3H15Q8WU90 426 aaKnown RBP23.59■■□□□ 1.37
VPS16-204ENST00000417508 DPF2Q92785 391 aa23.59■■□□□ 1.37
VPS16-204ENST00000417508 ZC3H12CQ9C0D7 883 aaKnown RBP23.59■■□□□ 1.37
VPS16-204ENST00000417508 PGAP2Q9UHJ9 254 aa23.59■■□□□ 1.37
VPS16-204ENST00000417508 H7C1D1 291 aa23.58■■□□□ 1.37
VPS16-204ENST00000417508 VAMP4O75379 141 aa23.58■■□□□ 1.37
VPS16-204ENST00000417508 G2E3Q7L622 706 aa23.58■■□□□ 1.37
VPS16-204ENST00000417508 ANKRD18AQ8IVF6 992 aa23.58■■□□□ 1.37
VPS16-204ENST00000417508 JARID2Q92833 1246 aaPredicted RBP23.58■■□□□ 1.37
VPS16-204ENST00000417508 ANKIB1Q9P2G1 1089 aa23.58■■□□□ 1.37
VPS16-204ENST00000417508 CNOT7Q9UIV1 285 aaKnown RBP23.58■■□□□ 1.37
VPS16-204ENST00000417508 NEURL1BA8MQ27 555 aa23.57■■□□□ 1.36
VPS16-204ENST00000417508 RIMBP2O15034 1052 aa23.57■■□□□ 1.36
VPS16-204ENST00000417508 HSPA1AP0DMV8 641 aaKnown RBP23.57■■□□□ 1.36
VPS16-204ENST00000417508 HSPA1BP0DMV9 641 aaKnown RBP23.57■■□□□ 1.36
VPS16-204ENST00000417508 FLIIQ13045 1269 aa23.57■■□□□ 1.36
VPS16-204ENST00000417508 CDC5LQ99459 802 aaKnown RBP23.57■■□□□ 1.36
VPS16-204ENST00000417508 SALL2Q9Y467 1007 aaPredicted RBP23.57■■□□□ 1.36
VPS16-204ENST00000417508 RASSF10A6NK89 507 aa23.56■■□□□ 1.36
VPS16-204ENST00000417508 H7C1W4 665 aa23.56■■□□□ 1.36
VPS16-204ENST00000417508 RPS12P25398 132 aaKnown RBP23.56■■□□□ 1.36
VPS16-204ENST00000417508 CTSWP56202 376 aa23.56■■□□□ 1.36
VPS16-204ENST00000417508 DEFB115Q30KQ5 88 aa23.56■■□□□ 1.36
VPS16-204ENST00000417508 TTLL11Q8NHH1 800 aa23.56■■□□□ 1.36
VPS16-204ENST00000417508 DBNDD1Q9H9R9 158 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms