RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 CCDC152Q4G0S7 254 aa22.13■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 SOGA3Q5TF21 947 aa22.13■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 CTSWP56202 376 aa22.12■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 GRAPQ13588 217 aa22.12■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 CC2D2BQ6DHV5 1058 aa22.12■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 TTLL11Q8NHH1 800 aa22.12■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 GRAPLQ8TC17 118 aaPredicted RBP22.12■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 USP44Q9H0E7 712 aa22.12■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 RTL9Q8NET4 1388 aa22.12■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 TMC4Q7Z404 712 aa22.11■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 SLX4Q8IY92 1834 aa22.1■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 NBPF7P0C2Y1 421 aaPredicted RBP22.1■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 GRIPAP1Q4V328 841 aa22.1■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 C21orf2O43822 256 aa22.09■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 FOXO4P98177 505 aa22.09■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 MS4A1P11836 297 aa22.08■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 DZIP1LQ8IYY4 767 aaKnown RBP22.08■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 HDAC5Q9UQL6 1122 aa22.08■■□□□ 1.13
COMMD3-BMI1-201ENST00000417470 PPEF1O14829 653 aaPredicted RBP22.07■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 RPS8P62241 208 aaKnown RBP22.07■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 CCDC93Q567U6 631 aa22.07■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 ARHGAP27Q6ZUM4 889 aa22.07■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 SP8Q8IXZ3 490 aa22.07■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 KAZALD1Q96I82 304 aa22.07■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 TNNQ9UQP3 1299 aa22.07■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 ATP6V0A2Q9Y487 856 aa22.07■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 LTBP3Q9NS15 1303 aa22.06■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 RTKN2Q8IZC4 609 aa22.06■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 CELF1Q92879 486 aaKnown RBP22.06■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 CLUAP1Q96AJ1 413 aa22.06■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 SUCLG2Q96I99 432 aa22.06■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 RABL6Q3YEC7 729 aaPredicted RBP22.05■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 EPHA10Q5JZY3 1008 aa22.05■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 CDC5LQ99459 802 aaKnown RBP22.05■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 GREM2Q9H772 168 aa22.05■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 SEC31BQ9NQW1 1179 aa22.05■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 MYH3P11055 1940 aa22.05■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 SNED1Q8TER0 1413 aa22.05■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 FTSJ3Q8IY81 847 aaKnown RBP22.04■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 TMEM57Q8N5G2 664 aa22.04■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.04■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 TMX4Q9H1E5 349 aaPredicted RBP22.04■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 NFKBIEO00221 500 aa22.03■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 GNAI3P08754 354 aa22.03■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 UBTFL1P0CB47 393 aaPredicted RBP22.03■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 LMBR1LQ6UX01 489 aa22.03■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 ZNF219Q9P2Y4 722 aaPredicted RBP22.03■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 RLBP1P12271 317 aa22.02■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 ITGA6P23229 1130 aa22.02■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 ANKRD18AQ8IVF6 992 aa22.02■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 CCDC85AQ96PX6 553 aaPredicted RBP22.02■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 PSMD1Q99460 953 aa22.02■■□□□ 1.12
COMMD3-BMI1-201ENST00000417470 FKBP4Q02790 459 aaKnown RBP eCLIP22.01■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 PDE3AQ14432 1141 aa22.01■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 FAM161AQ3B820 660 aa22.01■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 ANKRD44Q8N8A2 993 aa22.01■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 MEIS3Q99687 375 aa22.01■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 TAOK3Q9H2K8 898 aa22.01■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 BICC1Q9H694 974 aaKnown RBP22.01■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 BSDC1Q9NW68 430 aaPredicted RBP22.01■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 CACNA1SQ13698 1873 aa22■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 FER1L6Q2WGJ9 1857 aa22■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 ANKRD18BA2A2Z9 1011 aa22■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 IFIT5Q13325 482 aaKnown RBP22■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 OLFM4Q6UX06 510 aa22■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 RTFDC1Q9BY42 306 aaPredicted RBP22■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 VPS33BQ9H267 617 aa21.99■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 ZBTB7BO15156 539 aaPredicted RBP21.98■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 LMNB1P20700 586 aa21.98■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 IGHMBP2P38935 993 aaKnown RBP21.98■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 CCDC57Q2TAC2 916 aa21.98■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 PODXL2Q9NZ53 605 aa21.98■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 TAF1P21675 1872 aa21.98■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 CHD4Q14839 1912 aa21.98■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 COL4A1P02462 1669 aa21.98■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 PLIN1O60240 522 aa21.97■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 MPNDQ8N594 471 aa21.97■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 PANK1Q8TE04 598 aa21.97■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 LRRC37AA6NMS7 1700 aa21.97■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 PRELPP51888 382 aa21.96■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 RASSF7Q02833 373 aa21.96■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 ITPRIPQ8IWB1 547 aa21.96■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 SUPT20HQ8NEM7 779 aa21.96■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 CHMP3Q9Y3E7 222 aa21.96■■□□□ 1.11
COMMD3-BMI1-201ENST00000417470 GNAI2P04899 355 aa21.95■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 MTX1Q13505 466 aa21.95■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 MVPQ14764 893 aaKnown RBP21.95■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 DPP8Q6V1X1 898 aaPredicted RBP21.95■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 MPHOSPH8Q99549 860 aa21.95■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 LRRFIP2Q9Y608 721 aaKnown RBP21.95■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 ZC3H4Q9UPT8 1303 aaKnown RBP21.95■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 C9orf131Q5VYM1 1079 aa21.94■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 SLC51AQ86UW1 340 aa21.94■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 MINPP1Q9UNW1 487 aa21.94■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 SBF1O95248 1867 aa21.93■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 CHMP4BQ9H444 224 aaKnown RBP21.93■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 DDX19BQ9UMR2 479 aa21.93■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 NSFL1CQ9UNZ2 370 aaKnown RBP21.93■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 RFX5P48382 616 aaPredicted RBP21.92■■□□□ 1.1
COMMD3-BMI1-201ENST00000417470 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms