RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ATG9AQ7Z3C6 839 aa20.88■□□□□ 0.93
CALD1-204ENST00000417172 AACSQ86V21 672 aa20.88■□□□□ 0.93
CALD1-204ENST00000417172 STAP2Q9UGK3 403 aa20.88■□□□□ 0.93
CALD1-204ENST00000417172 COL24A1Q17RW2 1714 aa20.88■□□□□ 0.93
CALD1-204ENST00000417172 ZPR1O75312 459 aa20.88■□□□□ 0.93
CALD1-204ENST00000417172 CCDC8Q9H0W5 538 aaPredicted RBP20.88■□□□□ 0.93
CALD1-204ENST00000417172 SPEF2Q9C093 1822 aa20.87■□□□□ 0.93
CALD1-204ENST00000417172 PDE8AO60658 829 aa20.87■□□□□ 0.93
CALD1-204ENST00000417172 CCDC57Q2TAC2 916 aa20.87■□□□□ 0.93
CALD1-204ENST00000417172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.86■□□□□ 0.93
CALD1-204ENST00000417172 TRAPPC3LQ5T215 181 aa20.86■□□□□ 0.93
CALD1-204ENST00000417172 TBC1D9Q6ZT07 1266 aa20.86■□□□□ 0.93
CALD1-204ENST00000417172 PI4K2BQ8TCG2 481 aa20.86■□□□□ 0.93
CALD1-204ENST00000417172 USP42Q9H9J4 1324 aaKnown RBP20.86■□□□□ 0.93
CALD1-204ENST00000417172 MAP4K4O95819 1239 aaPredicted RBP20.86■□□□□ 0.93
CALD1-204ENST00000417172 RFC4P35249 363 aa20.86■□□□□ 0.93
CALD1-204ENST00000417172 TAF1P21675 1872 aa20.85■□□□□ 0.93
CALD1-204ENST00000417172 IFIT2P09913 472 aaKnown RBP20.85■□□□□ 0.93
CALD1-204ENST00000417172 ITGA6P23229 1130 aa20.85■□□□□ 0.93
CALD1-204ENST00000417172 IFIT5Q13325 482 aaKnown RBP20.85■□□□□ 0.93
CALD1-204ENST00000417172 COL4A1P02462 1669 aa20.85■□□□□ 0.93
CALD1-204ENST00000417172 MFAP1P55081 439 aaKnown RBP20.84■□□□□ 0.93
CALD1-204ENST00000417172 ERFEQ4G0M1 354 aa20.84■□□□□ 0.93
CALD1-204ENST00000417172 EYA2O00167 538 aa20.84■□□□□ 0.93
CALD1-204ENST00000417172 PLSCR1O15162 318 aa20.83■□□□□ 0.93
CALD1-204ENST00000417172 TNNI3KQ59H18 835 aa20.83■□□□□ 0.93
CALD1-204ENST00000417172 CCDC24Q8N4L8 307 aa20.83■□□□□ 0.93
CALD1-204ENST00000417172 FPGT-TNNI3KV9GXZ4 949 aa20.83■□□□□ 0.93
CALD1-204ENST00000417172 ABCC12Q96J65 1359 aa20.83■□□□□ 0.92
CALD1-204ENST00000417172 CDC45O75419 566 aa20.82■□□□□ 0.92
CALD1-204ENST00000417172 ZNF827Q17R98 1081 aa20.82■□□□□ 0.92
CALD1-204ENST00000417172 C3orf67Q6ZVT6 689 aa20.82■□□□□ 0.92
CALD1-204ENST00000417172 AOX1Q06278 1338 aa20.82■□□□□ 0.92
CALD1-204ENST00000417172 TRIM6-TRIM34B2RNG4 842 aa20.82■□□□□ 0.92
CALD1-204ENST00000417172 TAF7LQ5H9L4 462 aa20.82■□□□□ 0.92
CALD1-204ENST00000417172 RILPL2Q969X0 211 aa20.81■□□□□ 0.92
CALD1-204ENST00000417172 SETDB2Q96T68 719 aa20.81■□□□□ 0.92
CALD1-204ENST00000417172 SEC31BQ9NQW1 1179 aa20.81■□□□□ 0.92
CALD1-204ENST00000417172 ANKRD18BA2A2Z9 1011 aa20.8■□□□□ 0.92
CALD1-204ENST00000417172 IL15P40933 162 aaPredicted RBP20.8■□□□□ 0.92
CALD1-204ENST00000417172 DBNLQ9UJU6 430 aaKnown RBP20.8■□□□□ 0.92
CALD1-204ENST00000417172 LRP5O75197 1615 aa20.8■□□□□ 0.92
CALD1-204ENST00000417172 CIAO1O76071 339 aa20.8■□□□□ 0.92
CALD1-204ENST00000417172 ECHDC1Q9NTX5 307 aa20.8■□□□□ 0.92
CALD1-204ENST00000417172 TTC41PQ6P2S7 1318 aa20.8■□□□□ 0.92
CALD1-204ENST00000417172 RIC1Q4ADV7 1423 aa20.8■□□□□ 0.92
CALD1-204ENST00000417172 RGL2O15211 777 aa20.79■□□□□ 0.92
CALD1-204ENST00000417172 RGPD3A6NKT7 1758 aaPredicted RBP20.79■□□□□ 0.92
CALD1-204ENST00000417172 RGPD4Q7Z3J3 1758 aa20.79■□□□□ 0.92
CALD1-204ENST00000417172 ADRA2BP18089 450 aa20.78■□□□□ 0.92
CALD1-204ENST00000417172 NBPF5PQ86XG9 351 aaPredicted RBP20.78■□□□□ 0.92
CALD1-204ENST00000417172 DBNDD2Q9BQY9 259 aa20.78■□□□□ 0.92
CALD1-204ENST00000417172 ZNF609O15014 1411 aa20.78■□□□□ 0.92
CALD1-204ENST00000417172 TNRC6CQ9HCJ0 1690 aaKnown RBP20.78■□□□□ 0.92
CALD1-204ENST00000417172 GYS1P13807 737 aa20.78■□□□□ 0.92
CALD1-204ENST00000417172 SSFA2P28290 1259 aa20.78■□□□□ 0.92
CALD1-204ENST00000417172 TIMM10P62072 90 aa20.78■□□□□ 0.92
CALD1-204ENST00000417172 NFIXQ14938 502 aa20.78■□□□□ 0.92
CALD1-204ENST00000417172 LDHAL6AQ6ZMR3 332 aa20.78■□□□□ 0.92
CALD1-204ENST00000417172 GTF2E1P29083 439 aaPredicted RBP20.77■□□□□ 0.92
CALD1-204ENST00000417172 ANP32AP39687 249 aaKnown RBP20.77■□□□□ 0.92
CALD1-204ENST00000417172 GLRX3O76003 335 aaKnown RBP20.76■□□□□ 0.91
CALD1-204ENST00000417172 AKT1S1Q96B36 256 aa20.76■□□□□ 0.91
CALD1-204ENST00000417172 GPATCH3Q96I76 525 aa20.76■□□□□ 0.91
CALD1-204ENST00000417172 TFCP2L1Q9NZI6 479 aa20.76■□□□□ 0.91
CALD1-204ENST00000417172 RIPOR2Q9Y4F9 1068 aa20.76■□□□□ 0.91
CALD1-204ENST00000417172 NEUROD6Q96NK8 337 aa20.76■□□□□ 0.91
CALD1-204ENST00000417172 CNNM1Q9NRU3 951 aa20.76■□□□□ 0.91
CALD1-204ENST00000417172 CCDC152Q4G0S7 254 aa20.75■□□□□ 0.91
CALD1-204ENST00000417172 BOLA2Q9H3K6 86 aa20.75■□□□□ 0.91
CALD1-204ENST00000417172 ERC2O15083 957 aa20.74■□□□□ 0.91
CALD1-204ENST00000417172 EN1Q05925 392 aaPredicted RBP20.74■□□□□ 0.91
CALD1-204ENST00000417172 TBC1D32Q96NH3 1257 aa20.74■□□□□ 0.91
CALD1-204ENST00000417172 CEP126Q9P2H0 1117 aa20.74■□□□□ 0.91
CALD1-204ENST00000417172 NDUFB9Q9Y6M9 179 aa20.74■□□□□ 0.91
CALD1-204ENST00000417172 CARMIL3Q8ND23 1372 aa20.74■□□□□ 0.91
CALD1-204ENST00000417172 A0A1B0GUL7 405 aa20.74■□□□□ 0.91
CALD1-204ENST00000417172 EZH2Q15910 746 aaKnown RBP20.74■□□□□ 0.91
CALD1-204ENST00000417172 METTL24Q5JXM2 366 aa20.74■□□□□ 0.91
CALD1-204ENST00000417172 NYXQ9GZU5 481 aa20.74■□□□□ 0.91
CALD1-204ENST00000417172 UPF2Q9HAU5 1272 aaKnown RBP20.74■□□□□ 0.91
CALD1-204ENST00000417172 FBXO3Q9UK99 471 aa20.73■□□□□ 0.91
CALD1-204ENST00000417172 ADORA1P30542 326 aa20.72■□□□□ 0.91
CALD1-204ENST00000417172 TPTE2Q6XPS3 522 aa20.72■□□□□ 0.91
CALD1-204ENST00000417172 COL23A1Q86Y22 540 aaPredicted RBP20.72■□□□□ 0.91
CALD1-204ENST00000417172 HELBQ8NG08 1087 aaPredicted RBP20.72■□□□□ 0.91
CALD1-204ENST00000417172 EDC3Q96F86 508 aaKnown RBP20.72■□□□□ 0.91
CALD1-204ENST00000417172 A0A1B0GUL6 1792 aa20.72■□□□□ 0.91
CALD1-204ENST00000417172 CHMLP26374 656 aa20.72■□□□□ 0.91
CALD1-204ENST00000417172 SLC10A5Q5PT55 438 aa20.72■□□□□ 0.91
CALD1-204ENST00000417172 VGLL2Q8N8G2 317 aa20.72■□□□□ 0.91
CALD1-204ENST00000417172 C22orf23Q9BZE7 217 aa20.72■□□□□ 0.91
CALD1-204ENST00000417172 GPR108Q9NPR9 543 aa20.72■□□□□ 0.91
CALD1-204ENST00000417172 RTL9Q8NET4 1388 aa20.72■□□□□ 0.91
CALD1-204ENST00000417172 MSH5O43196 834 aa20.71■□□□□ 0.91
CALD1-204ENST00000417172 CNTROBQ8N137 903 aa20.71■□□□□ 0.91
CALD1-204ENST00000417172 IL25Q9H293 177 aa20.71■□□□□ 0.91
CALD1-204ENST00000417172 NPHP1O15259 732 aa20.7■□□□□ 0.91
CALD1-204ENST00000417172 HSP90B1P14625 803 aaKnown RBP20.7■□□□□ 0.91
CALD1-204ENST00000417172 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms