RNA–Protein interactions for RNA: ENST00000417112.1

LINP1-201, Transcript of lncRNA in non-homologous end joining pathway 1, humanhuman

TSL 2 BASIC

Gene LINP1, Length 917 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINP1-201ENST00000417112 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
LINP1-201ENST00000417112 SLC51AQ86UW1 340 aa17.29■□□□□ 0.36
LINP1-201ENST00000417112 GRAPLQ8TC17 118 aaPredicted RBP17.29■□□□□ 0.36
LINP1-201ENST00000417112 TAF1P21675 1872 aa17.29■□□□□ 0.36
LINP1-201ENST00000417112 UTYO14607 1347 aa17.28■□□□□ 0.36
LINP1-201ENST00000417112 NFKBIEO00221 500 aa17.28■□□□□ 0.36
LINP1-201ENST00000417112 PPEF1O14829 653 aaPredicted RBP17.28■□□□□ 0.36
LINP1-201ENST00000417112 TRIM27P14373 513 aa17.28■□□□□ 0.36
LINP1-201ENST00000417112 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
LINP1-201ENST00000417112 SOGA3Q5TF21 947 aa17.28■□□□□ 0.36
LINP1-201ENST00000417112 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.36
LINP1-201ENST00000417112 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.36
LINP1-201ENST00000417112 RASSF7Q02833 373 aa17.27■□□□□ 0.36
LINP1-201ENST00000417112 TTLL11Q8NHH1 800 aa17.27■□□□□ 0.36
LINP1-201ENST00000417112 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.36
LINP1-201ENST00000417112 CELF1Q92879 486 aaKnown RBP17.27■□□□□ 0.36
LINP1-201ENST00000417112 C9orf78Q9NZ63 289 aaPredicted RBP17.27■□□□□ 0.36
LINP1-201ENST00000417112 LRRC37AA6NMS7 1700 aa17.27■□□□□ 0.35
LINP1-201ENST00000417112 RTL9Q8NET4 1388 aa17.27■□□□□ 0.35
LINP1-201ENST00000417112 BBOX1O75936 387 aa17.26■□□□□ 0.35
LINP1-201ENST00000417112 CCDC93Q567U6 631 aa17.26■□□□□ 0.35
LINP1-201ENST00000417112 ATF7IPQ6VMQ6 1270 aa17.26■□□□□ 0.35
LINP1-201ENST00000417112 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
LINP1-201ENST00000417112 SEC31BQ9NQW1 1179 aa17.26■□□□□ 0.35
LINP1-201ENST00000417112 TNNQ9UQP3 1299 aa17.26■□□□□ 0.35
LINP1-201ENST00000417112 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
LINP1-201ENST00000417112 SBF1O95248 1867 aa17.25■□□□□ 0.35
LINP1-201ENST00000417112 CSF1RP07333 972 aa17.25■□□□□ 0.35
LINP1-201ENST00000417112 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
LINP1-201ENST00000417112 PRELPP51888 382 aa17.25■□□□□ 0.35
LINP1-201ENST00000417112 FOXO4P98177 505 aa17.25■□□□□ 0.35
LINP1-201ENST00000417112 ZKSCAN2Q63HK3 967 aa17.25■□□□□ 0.35
LINP1-201ENST00000417112 GREM2Q9H772 168 aa17.25■□□□□ 0.35
LINP1-201ENST00000417112 ATP6V0A2Q9Y487 856 aa17.25■□□□□ 0.35
LINP1-201ENST00000417112 EPHA10Q5JZY3 1008 aa17.24■□□□□ 0.35
LINP1-201ENST00000417112 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
LINP1-201ENST00000417112 CC2D2BQ6DHV5 1058 aa17.24■□□□□ 0.35
LINP1-201ENST00000417112 KAZALD1Q96I82 304 aa17.24■□□□□ 0.35
LINP1-201ENST00000417112 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
LINP1-201ENST00000417112 USP44Q9H0E7 712 aa17.24■□□□□ 0.35
LINP1-201ENST00000417112 YY1P25490 414 aa17.23■□□□□ 0.35
LINP1-201ENST00000417112 TMC4Q7Z404 712 aa17.23■□□□□ 0.35
LINP1-201ENST00000417112 SP8Q8IXZ3 490 aa17.23■□□□□ 0.35
LINP1-201ENST00000417112 RTKN2Q8IZC4 609 aa17.23■□□□□ 0.35
LINP1-201ENST00000417112 TAOK3Q9H2K8 898 aa17.23■□□□□ 0.35
LINP1-201ENST00000417112 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
LINP1-201ENST00000417112 RPS8P62241 208 aaKnown RBP17.22■□□□□ 0.35
LINP1-201ENST00000417112 FKBP4Q02790 459 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINP1-201ENST00000417112 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
LINP1-201ENST00000417112 C9orf131Q5VYM1 1079 aa17.22■□□□□ 0.35
LINP1-201ENST00000417112 LTBP1Q14766 1721 aa17.21■□□□□ 0.35
LINP1-201ENST00000417112 DUOX1Q9NRD9 1551 aa17.21■□□□□ 0.35
LINP1-201ENST00000417112 LMNB1P20700 586 aa17.21■□□□□ 0.35
LINP1-201ENST00000417112 GRIPAP1Q4V328 841 aa17.21■□□□□ 0.35
LINP1-201ENST00000417112 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
LINP1-201ENST00000417112 PSMD1Q99460 953 aa17.21■□□□□ 0.35
LINP1-201ENST00000417112 SPEF2Q9C093 1822 aa17.21■□□□□ 0.35
LINP1-201ENST00000417112 TIAM2Q8IVF5 1701 aa17.21■□□□□ 0.35
LINP1-201ENST00000417112 ITGA6P23229 1130 aa17.2■□□□□ 0.34
LINP1-201ENST00000417112 LMBR1LQ6UX01 489 aa17.2■□□□□ 0.34
LINP1-201ENST00000417112 CDC5LQ99459 802 aaKnown RBP17.2■□□□□ 0.34
LINP1-201ENST00000417112 RNF181Q9P0P0 153 aa17.2■□□□□ 0.34
LINP1-201ENST00000417112 CCDC88AQ3V6T2 1871 aa17.2■□□□□ 0.34
LINP1-201ENST00000417112 RABL6Q3YEC7 729 aaPredicted RBP17.19■□□□□ 0.34
LINP1-201ENST00000417112 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
LINP1-201ENST00000417112 TMEM57Q8N5G2 664 aa17.19■□□□□ 0.34
LINP1-201ENST00000417112 ANKRD44Q8N8A2 993 aa17.19■□□□□ 0.34
LINP1-201ENST00000417112 MEIS3Q99687 375 aa17.19■□□□□ 0.34
LINP1-201ENST00000417112 TMX4Q9H1E5 349 aaPredicted RBP17.19■□□□□ 0.34
LINP1-201ENST00000417112 BICC1Q9H694 974 aaKnown RBP17.19■□□□□ 0.34
LINP1-201ENST00000417112 DICER1Q9UPY3 1922 aaKnown RBP17.19■□□□□ 0.34
LINP1-201ENST00000417112 RLBP1P12271 317 aa17.18■□□□□ 0.34
LINP1-201ENST00000417112 DZIP1LQ8IYY4 767 aaKnown RBP17.18■□□□□ 0.34
LINP1-201ENST00000417112 ZNF277Q9NRM2 450 aaPredicted RBP17.18■□□□□ 0.34
LINP1-201ENST00000417112 ANKRD18BA2A2Z9 1011 aa17.17■□□□□ 0.34
LINP1-201ENST00000417112 UBTFL1P0CB47 393 aaPredicted RBP17.17■□□□□ 0.34
LINP1-201ENST00000417112 DPP8Q6V1X1 898 aaPredicted RBP17.17■□□□□ 0.34
LINP1-201ENST00000417112 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
LINP1-201ENST00000417112 RTFDC1Q9BY42 306 aaPredicted RBP17.17■□□□□ 0.34
LINP1-201ENST00000417112 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
LINP1-201ENST00000417112 COL4A5P29400 1685 aa17.16■□□□□ 0.34
LINP1-201ENST00000417112 IGHMBP2P38935 993 aaKnown RBP17.16■□□□□ 0.34
LINP1-201ENST00000417112 GPSM2P81274 684 aa17.16■□□□□ 0.34
LINP1-201ENST00000417112 IFIT5Q13325 482 aaKnown RBP17.16■□□□□ 0.34
LINP1-201ENST00000417112 MPNDQ8N594 471 aa17.16■□□□□ 0.34
LINP1-201ENST00000417112 BSDC1Q9NW68 430 aaPredicted RBP17.16■□□□□ 0.34
LINP1-201ENST00000417112 ZC3H4Q9UPT8 1303 aaKnown RBP17.16■□□□□ 0.34
LINP1-201ENST00000417112 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
LINP1-201ENST00000417112 CCDC57Q2TAC2 916 aa17.15■□□□□ 0.34
LINP1-201ENST00000417112 PODXL2Q9NZ53 605 aa17.15■□□□□ 0.34
LINP1-201ENST00000417112 PLIN1O60240 522 aa17.14■□□□□ 0.33
LINP1-201ENST00000417112 GNAI3P08754 354 aa17.14■□□□□ 0.33
LINP1-201ENST00000417112 SUPT20HQ8NEM7 779 aa17.14■□□□□ 0.33
LINP1-201ENST00000417112 PANK1Q8TE04 598 aa17.14■□□□□ 0.33
LINP1-201ENST00000417112 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
LINP1-201ENST00000417112 NSFL1CQ9UNZ2 370 aaKnown RBP17.14■□□□□ 0.33
LINP1-201ENST00000417112 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.33
LINP1-201ENST00000417112 A0A1B0GUL6 1792 aa17.13■□□□□ 0.33
LINP1-201ENST00000417112 ITPRIPQ8IWB1 547 aa17.13■□□□□ 0.33
LINP1-201ENST00000417112 ZNF784Q8NCA9 323 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms