RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 GOLGA6L4A6NEF3 574 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 TYRO3Q06418 890 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 CDC37L1Q7L3B6 337 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 FERMT3Q86UX7 667 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 AACSQ86V21 672 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 SUCLG2Q96I99 432 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 ZNF496Q96IT1 587 aaPredicted RBP15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 DDX21Q9NR30 783 aaKnown RBP eCLIP15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 PRDM10Q9NQV6 1147 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 C5P01031 1676 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 FAM177BA6PVY3 158 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 CYP27B1O15528 508 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 ANKRD1Q15327 319 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 RIC3Q7Z5B4 369 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 KAZALD1Q96I82 304 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 TNMDQ9H2S6 317 aa15.19■□□□□ 0.02
LRRTM1-205ENST00000417012 SCN11AQ9UI33 1791 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 ALDH1L1O75891 902 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 CAMK4Q16566 473 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 RNF20Q5VTR2 975 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 SCAND2PQ9GZW5 306 aaPredicted RBP15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 BICC1Q9H694 974 aaKnown RBP15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 USP16Q9Y5T5 823 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 GRM8O00222 908 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 IGKV5-2P06315 115 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 LIG1P18858 919 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 MRVI1Q9Y6F6 885 aa15.18■□□□□ 0.02
LRRTM1-205ENST00000417012 RIOK3O14730 519 aaKnown RBP15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 PPP4R3BQ5MIZ7 849 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 COPS6Q7L5N1 327 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 CADPS2Q86UW7 1296 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 IFNL2Q8IZJ0 200 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 LINS1Q8NG48 757 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 KLHDC4Q8TBB5 520 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 XAGE3Q8WTP9 111 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 MAP4K1Q92918 833 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 COL18A1P39060 1754 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 SLC27A2O14975 620 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 PTGS1P23219 599 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 LUZP1Q86V48 1076 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 FAM227BQ96M60 508 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 SIL1Q9H173 461 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 ADAMTS7Q9UKP4 1686 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 DACT1Q9NYF0 836 aa15.17■□□□□ 0.02
LRRTM1-205ENST00000417012 FAM173BQ6P4H8 233 aa15.16■□□□□ 0.02
LRRTM1-205ENST00000417012 PDCL2Q8N4E4 241 aa15.16■□□□□ 0.02
LRRTM1-205ENST00000417012 SPATA32Q96LK8 384 aa15.16■□□□□ 0.02
LRRTM1-205ENST00000417012 DRC7Q8IY82 874 aa15.16■□□□□ 0.02
LRRTM1-205ENST00000417012 CKAP2LQ8IYA6 745 aa15.16■□□□□ 0.02
LRRTM1-205ENST00000417012 TNS3Q68CZ2 1445 aa15.15■□□□□ 0.02
LRRTM1-205ENST00000417012 ANO6Q4KMQ2 910 aa15.15■□□□□ 0.02
LRRTM1-205ENST00000417012 MYD88Q99836 296 aa15.15■□□□□ 0.02
LRRTM1-205ENST00000417012 TTC5Q8N0Z6 440 aa15.15■□□□□ 0.02
LRRTM1-205ENST00000417012 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
LRRTM1-205ENST00000417012 CBX8Q9HC52 389 aa15.15■□□□□ 0.02
LRRTM1-205ENST00000417012 SPATA31A3Q5VYP0 1347 aa15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 CBX1P83916 185 aa15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 G3BP1Q13283 466 aaKnown RBP eCLIP15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 RPS6KB1P23443 525 aa15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 TCEANC2Q96MN5 208 aa15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 DMTNQ08495 405 aa15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 UTP14CQ5TAP6 766 aaKnown RBP15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 CCDC186Q7Z3E2 898 aa15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 TRIM5Q9C035 493 aa15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 CLSTN2Q9H4D0 955 aa15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 SNRKQ9NRH2 765 aa15.14■□□□□ 0.01
LRRTM1-205ENST00000417012 NEURL1BA8MQ27 555 aa15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 SASH1O94885 1247 aa15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 EPHA10Q5JZY3 1008 aa15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 BICD2Q8TD16 824 aa15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 LEO1Q8WVC0 666 aaPredicted RBP15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 DCAF5Q96JK2 942 aa15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 CCDC8Q9H0W5 538 aaPredicted RBP15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 TFIP11Q9UBB9 837 aaKnown RBP15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 A0A0D9SFI3 127 aa15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 LARP1Q6PKG0 1096 aaKnown RBP15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 EAF2Q96CJ1 260 aaPredicted RBP15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 TLR7Q9NYK1 1049 aaKnown RBP15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 HMG20BQ9P0W2 317 aa15.13■□□□□ 0.01
LRRTM1-205ENST00000417012 CTIFO43310 598 aaKnown RBP15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 CABP4P57796 275 aa15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 BRINP3Q76B58 766 aa15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 ANKRD7Q92527 254 aa15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 ALDH8A1Q9H2A2 487 aaPredicted RBP15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 DCCP43146 1447 aa15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 ZSCAN20P17040 1043 aaPredicted RBP15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 NEXNQ0ZGT2 675 aa15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 STK3Q13188 491 aa15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 RBM43Q6ZSC3 357 aaKnown RBP15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.01
LRRTM1-205ENST00000417012 ATP5J2-PTCD1G3V325 749 aa15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 PTCD1O75127 700 aaKnown RBP15.11■□□□□ 0.01
LRRTM1-205ENST00000417012 ZNF75DP51815 510 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms