RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 LARGE2Q8N3Y3 721 aa19.53■□□□□ 0.72
UBXN4-203ENST00000416538 CELF1Q92879 486 aaKnown RBP19.53■□□□□ 0.72
UBXN4-203ENST00000416538 KLRG1Q96E93 195 aa19.53■□□□□ 0.72
UBXN4-203ENST00000416538 MYD88Q99836 296 aa19.53■□□□□ 0.72
UBXN4-203ENST00000416538 SF3B3Q15393 1217 aaKnown RBP19.52■□□□□ 0.72
UBXN4-203ENST00000416538 CHADLQ6NUI6 762 aa19.52■□□□□ 0.72
UBXN4-203ENST00000416538 DDX46Q7L014 1031 aaKnown RBP19.52■□□□□ 0.72
UBXN4-203ENST00000416538 RIC3Q7Z5B4 369 aa19.52■□□□□ 0.72
UBXN4-203ENST00000416538 JDP2Q8WYK2 163 aa19.52■□□□□ 0.72
UBXN4-203ENST00000416538 RTFDC1Q9BY42 306 aaPredicted RBP19.52■□□□□ 0.72
UBXN4-203ENST00000416538 IL16Q14005 1332 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 IQCA1LA6NCM1 817 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 PPIP5K2O43314 1243 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 GRIPAP1Q4V328 841 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 CCDC30Q5VVM6 783 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 G2E3Q7L622 706 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 SP8Q8IXZ3 490 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 GPC2Q8N158 579 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 JARID2Q92833 1246 aaPredicted RBP19.51■□□□□ 0.71
UBXN4-203ENST00000416538 HACL1Q9UJ83 578 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 PSME4Q14997 1843 aa19.51■□□□□ 0.71
UBXN4-203ENST00000416538 IRS4O14654 1257 aaPredicted RBP19.5■□□□□ 0.71
UBXN4-203ENST00000416538 BBOX1O75936 387 aa19.5■□□□□ 0.71
UBXN4-203ENST00000416538 EPHX2P34913 555 aa19.5■□□□□ 0.71
UBXN4-203ENST00000416538 SCNN1DP51172 638 aa19.5■□□□□ 0.71
UBXN4-203ENST00000416538 LDHDQ86WU2 507 aa19.5■□□□□ 0.71
UBXN4-203ENST00000416538 SALL2Q9Y467 1007 aaPredicted RBP19.5■□□□□ 0.71
UBXN4-203ENST00000416538 TRPM7Q96QT4 1865 aa19.5■□□□□ 0.71
UBXN4-203ENST00000416538 PASKQ96RG2 1323 aa19.5■□□□□ 0.71
UBXN4-203ENST00000416538 ZNF646O15015 1829 aaPredicted RBP19.49■□□□□ 0.71
UBXN4-203ENST00000416538 TWISTNBQ3B726 338 aaPredicted RBP19.49■□□□□ 0.71
UBXN4-203ENST00000416538 ZBTB38Q8NAP3 1195 aaPredicted RBP19.49■□□□□ 0.71
UBXN4-203ENST00000416538 METTL22Q9BUU2 404 aaPredicted RBP19.49■□□□□ 0.71
UBXN4-203ENST00000416538 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
UBXN4-203ENST00000416538 GJA3Q9Y6H8 435 aa19.49■□□□□ 0.71
UBXN4-203ENST00000416538 A0A1B0GUL6 1792 aa19.48■□□□□ 0.71
UBXN4-203ENST00000416538 IGKV5-2P06315 115 aa19.48■□□□□ 0.71
UBXN4-203ENST00000416538 EIF6P56537 245 aaKnown RBP19.48■□□□□ 0.71
UBXN4-203ENST00000416538 EAPPQ56P03 285 aaPredicted RBP19.48■□□□□ 0.71
UBXN4-203ENST00000416538 DPP8Q6V1X1 898 aaPredicted RBP19.48■□□□□ 0.71
UBXN4-203ENST00000416538 NIM1KQ8IY84 436 aa19.48■□□□□ 0.71
UBXN4-203ENST00000416538 MPNDQ8N594 471 aa19.48■□□□□ 0.71
UBXN4-203ENST00000416538 JMYQ8N9B5 988 aa19.48■□□□□ 0.71
UBXN4-203ENST00000416538 MAP3K2Q9Y2U5 619 aa19.48■□□□□ 0.71
UBXN4-203ENST00000416538 KIAA2012Q0VF49 1180 aa19.47■□□□□ 0.71
UBXN4-203ENST00000416538 CCDC191Q8NCU4 936 aa19.47■□□□□ 0.71
UBXN4-203ENST00000416538 SEC31BQ9NQW1 1179 aa19.47■□□□□ 0.71
UBXN4-203ENST00000416538 PI4KAP2A4QPH2 592 aa19.46■□□□□ 0.71
UBXN4-203ENST00000416538 YDJCA8MPS7 323 aa19.46■□□□□ 0.71
UBXN4-203ENST00000416538 ITGBL1O95965 494 aaPredicted RBP19.46■□□□□ 0.71
UBXN4-203ENST00000416538 PCCAP05165 728 aaPredicted RBP19.46■□□□□ 0.71
UBXN4-203ENST00000416538 EPS15P42566 896 aa19.46■□□□□ 0.71
UBXN4-203ENST00000416538 PI4KAP1Q8N8J0 262 aa19.46■□□□□ 0.71
UBXN4-203ENST00000416538 PCNTO95613 3336 aa19.46■□□□□ 0.71
UBXN4-203ENST00000416538 CXCL9Q07325 125 aa19.45■□□□□ 0.7
UBXN4-203ENST00000416538 KSR2Q6VAB6 950 aa19.45■□□□□ 0.7
UBXN4-203ENST00000416538 GPR101Q96P66 508 aaPredicted RBP19.45■□□□□ 0.7
UBXN4-203ENST00000416538 CWC25Q9NXE8 425 aaPredicted RBP19.45■□□□□ 0.7
UBXN4-203ENST00000416538 GPSM2P81274 684 aa19.44■□□□□ 0.7
UBXN4-203ENST00000416538 CWF19L2Q2TBE0 894 aaKnown RBP19.44■□□□□ 0.7
UBXN4-203ENST00000416538 TMC4Q7Z404 712 aa19.44■□□□□ 0.7
UBXN4-203ENST00000416538 SUPT20HQ8NEM7 779 aa19.44■□□□□ 0.7
UBXN4-203ENST00000416538 ZNRF3Q9ULT6 936 aa19.44■□□□□ 0.7
UBXN4-203ENST00000416538 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
UBXN4-203ENST00000416538 DDX58O95786 925 aaKnown RBP19.43■□□□□ 0.7
UBXN4-203ENST00000416538 MAP1SQ66K74 1059 aaPredicted RBP19.43■□□□□ 0.7
UBXN4-203ENST00000416538 FAM9BQ8IZU0 186 aa19.43■□□□□ 0.7
UBXN4-203ENST00000416538 CCDC85AQ96PX6 553 aaPredicted RBP19.43■□□□□ 0.7
UBXN4-203ENST00000416538 STK31Q9BXU1 1019 aa19.43■□□□□ 0.7
UBXN4-203ENST00000416538 VPS33BQ9H267 617 aa19.43■□□□□ 0.7
UBXN4-203ENST00000416538 POLLQ9UGP5 575 aa19.43■□□□□ 0.7
UBXN4-203ENST00000416538 CDHR2Q9BYE9 1310 aa19.43■□□□□ 0.7
UBXN4-203ENST00000416538 SLC4A2P04920 1241 aa19.42■□□□□ 0.7
UBXN4-203ENST00000416538 EXOSC9Q06265 439 aaKnown RBP19.42■□□□□ 0.7
UBXN4-203ENST00000416538 WDR63Q8IWG1 891 aa19.42■□□□□ 0.7
UBXN4-203ENST00000416538 TMX4Q9H1E5 349 aaPredicted RBP19.42■□□□□ 0.7
UBXN4-203ENST00000416538 CREBZFQ9NS37 354 aa19.42■□□□□ 0.7
UBXN4-203ENST00000416538 POLR2AP24928 1970 aaKnown RBP19.42■□□□□ 0.7
UBXN4-203ENST00000416538 SHTN1A0MZ66 631 aa19.41■□□□□ 0.7
UBXN4-203ENST00000416538 NEURL1BA8MQ27 555 aa19.41■□□□□ 0.7
UBXN4-203ENST00000416538 PDE8AO60658 829 aa19.41■□□□□ 0.7
UBXN4-203ENST00000416538 VAMP4O75379 141 aa19.41■□□□□ 0.7
UBXN4-203ENST00000416538 FMR1Q06787 632 aaKnown RBP eCLIP19.41■□□□□ 0.72e-11■□□□□ 10.8
UBXN4-203ENST00000416538 FLIIQ13045 1269 aa19.41■□□□□ 0.7
UBXN4-203ENST00000416538 PNMA8AQ86V59 439 aaPredicted RBP19.41■□□□□ 0.7
UBXN4-203ENST00000416538 GPRC5DQ9NZD1 345 aa19.41■□□□□ 0.7
UBXN4-203ENST00000416538 NSFL1CQ9UNZ2 370 aaKnown RBP19.41■□□□□ 0.7
UBXN4-203ENST00000416538 RAD17O75943 681 aa19.4■□□□□ 0.7
UBXN4-203ENST00000416538 LMOD1P29536 600 aaPredicted RBP19.4■□□□□ 0.7
UBXN4-203ENST00000416538 GMPSP49915 693 aaPredicted RBP19.4■□□□□ 0.7
UBXN4-203ENST00000416538 RPS8P62241 208 aaKnown RBP19.4■□□□□ 0.7
UBXN4-203ENST00000416538 CLEC11AQ9Y240 323 aa19.4■□□□□ 0.7
UBXN4-203ENST00000416538 ZNF521Q96K83 1311 aa19.4■□□□□ 0.7
UBXN4-203ENST00000416538 THSD7BQ9C0I4 1608 aa19.4■□□□□ 0.7
UBXN4-203ENST00000416538 CIAPIN1Q6FI81 312 aa19.39■□□□□ 0.69
UBXN4-203ENST00000416538 DBNDD1Q9H9R9 158 aa19.39■□□□□ 0.69
UBXN4-203ENST00000416538 MKRN1Q9UHC7 482 aaKnown RBP19.39■□□□□ 0.69
UBXN4-203ENST00000416538 RTL9Q8NET4 1388 aa19.39■□□□□ 0.69
UBXN4-203ENST00000416538 RIMBP2O15034 1052 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms