RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 EAPPQ56P03 285 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-208ENST00000416159 WWC1Q8IX03 1113 aa22.69■■□□□ 1.22
PDLIM2-208ENST00000416159 GJA3Q9Y6H8 435 aa22.69■■□□□ 1.22
PDLIM2-208ENST00000416159 COL4A5P29400 1685 aa22.68■■□□□ 1.22
PDLIM2-208ENST00000416159 IRS4O14654 1257 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-208ENST00000416159 DDX58O95786 925 aaKnown RBP22.68■■□□□ 1.22
PDLIM2-208ENST00000416159 HSP90B1P14625 803 aaKnown RBP22.68■■□□□ 1.22
PDLIM2-208ENST00000416159 AOC3Q16853 763 aa22.68■■□□□ 1.22
PDLIM2-208ENST00000416159 CLEC11AQ9Y240 323 aa22.68■■□□□ 1.22
PDLIM2-208ENST00000416159 LMOD1P29536 600 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-208ENST00000416159 TSPYL6Q8N831 410 aa22.67■■□□□ 1.22
PDLIM2-208ENST00000416159 MYD88Q99836 296 aa22.67■■□□□ 1.22
PDLIM2-208ENST00000416159 DDX60Q8IY21 1712 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-208ENST00000416159 IL16Q14005 1332 aa22.66■■□□□ 1.22
PDLIM2-208ENST00000416159 RTL5Q5HYW3 569 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-208ENST00000416159 ZBTB38Q8NAP3 1195 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-208ENST00000416159 CCDC191Q8NCU4 936 aa22.66■■□□□ 1.22
PDLIM2-208ENST00000416159 TSR2Q969E8 191 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-208ENST00000416159 CREBZFQ9NS37 354 aa22.66■■□□□ 1.22
PDLIM2-208ENST00000416159 METTL22Q9BUU2 404 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-208ENST00000416159 ZNRF3Q9ULT6 936 aa22.65■■□□□ 1.22
PDLIM2-208ENST00000416159 TAF1P21675 1872 aa22.64■■□□□ 1.22
PDLIM2-208ENST00000416159 PASKQ96RG2 1323 aa22.64■■□□□ 1.22
PDLIM2-208ENST00000416159 KIAA2012Q0VF49 1180 aa22.64■■□□□ 1.21
PDLIM2-208ENST00000416159 CELF1Q92879 486 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-208ENST00000416159 STK31Q9BXU1 1019 aa22.64■■□□□ 1.21
PDLIM2-208ENST00000416159 ITGBL1O95965 494 aaPredicted RBP22.63■■□□□ 1.21
PDLIM2-208ENST00000416159 PCCAP05165 728 aaPredicted RBP22.63■■□□□ 1.21
PDLIM2-208ENST00000416159 CWC25Q9NXE8 425 aaPredicted RBP22.63■■□□□ 1.21
PDLIM2-208ENST00000416159 SCNN1DP51172 638 aa22.62■■□□□ 1.21
PDLIM2-208ENST00000416159 TWISTNBQ3B726 338 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-208ENST00000416159 RPS8P62241 208 aaKnown RBP22.61■■□□□ 1.21
PDLIM2-208ENST00000416159 CXCL9Q07325 125 aa22.61■■□□□ 1.21
PDLIM2-208ENST00000416159 KSR2Q6VAB6 950 aa22.61■■□□□ 1.21
PDLIM2-208ENST00000416159 CNTROBQ8N137 903 aa22.61■■□□□ 1.21
PDLIM2-208ENST00000416159 MAP3K2Q9Y2U5 619 aa22.61■■□□□ 1.21
PDLIM2-208ENST00000416159 ADAMTSL1Q8N6G6 1762 aa22.61■■□□□ 1.21
PDLIM2-208ENST00000416159 EPS15P42566 896 aa22.6■■□□□ 1.21
PDLIM2-208ENST00000416159 CIAPIN1Q6FI81 312 aa22.6■■□□□ 1.21
PDLIM2-208ENST00000416159 WDR63Q8IWG1 891 aa22.6■■□□□ 1.21
PDLIM2-208ENST00000416159 NSFL1CQ9UNZ2 370 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-208ENST00000416159 PI4KAP2A4QPH2 592 aa22.59■■□□□ 1.21
PDLIM2-208ENST00000416159 PDE8AO60658 829 aa22.59■■□□□ 1.21
PDLIM2-208ENST00000416159 TNIP1Q15025 636 aa22.59■■□□□ 1.21
PDLIM2-208ENST00000416159 USP50Q70EL3 339 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-208ENST00000416159 PI4KAP1Q8N8J0 262 aa22.59■■□□□ 1.21
PDLIM2-208ENST00000416159 LRRC37AA6NMS7 1700 aa22.58■■□□□ 1.21
PDLIM2-208ENST00000416159 TMEM88BA6NKF7 163 aa22.58■■□□□ 1.21
PDLIM2-208ENST00000416159 NEXNQ0ZGT2 675 aa22.58■■□□□ 1.21
PDLIM2-208ENST00000416159 WASHC4Q2M389 1173 aa22.58■■□□□ 1.21
PDLIM2-208ENST00000416159 CCDC152Q4G0S7 254 aa22.58■■□□□ 1.21
PDLIM2-208ENST00000416159 IFFO2Q5TF58 517 aa22.58■■□□□ 1.21
PDLIM2-208ENST00000416159 MAP1SQ66K74 1059 aaPredicted RBP22.58■■□□□ 1.21
PDLIM2-208ENST00000416159 LTBP1Q14766 1721 aa22.57■■□□□ 1.2
PDLIM2-208ENST00000416159 SLC4A2P04920 1241 aa22.57■■□□□ 1.2
PDLIM2-208ENST00000416159 GPRC5DQ9NZD1 345 aa22.57■■□□□ 1.2
PDLIM2-208ENST00000416159 SALL2Q9Y467 1007 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-208ENST00000416159 CDHR2Q9BYE9 1310 aa22.57■■□□□ 1.2
PDLIM2-208ENST00000416159 C6orf229H3BNL8 230 aa22.56■■□□□ 1.2
PDLIM2-208ENST00000416159 GPSM2P81274 684 aa22.56■■□□□ 1.2
PDLIM2-208ENST00000416159 JARID2Q92833 1246 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-208ENST00000416159 EYA3Q99504 573 aa22.56■■□□□ 1.2
PDLIM2-208ENST00000416159 SEC31BQ9NQW1 1179 aa22.56■■□□□ 1.2
PDLIM2-208ENST00000416159 ADARB2Q9NS39 739 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-208ENST00000416159 MKRN1Q9UHC7 482 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-208ENST00000416159 DUOX1Q9NRD9 1551 aa22.55■■□□□ 1.2
PDLIM2-208ENST00000416159 RAD17O75943 681 aa22.55■■□□□ 1.2
PDLIM2-208ENST00000416159 IGKV5-2P06315 115 aa22.55■■□□□ 1.2
PDLIM2-208ENST00000416159 BCL2L13Q9BXK5 485 aa22.55■■□□□ 1.2
PDLIM2-208ENST00000416159 POLLQ9UGP5 575 aa22.55■■□□□ 1.2
PDLIM2-208ENST00000416159 FANCIQ9NVI1 1328 aa22.55■■□□□ 1.2
PDLIM2-208ENST00000416159 GMPSP49915 693 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-208ENST00000416159 G2E3Q7L622 706 aa22.54■■□□□ 1.2
PDLIM2-208ENST00000416159 YDJCA8MPS7 323 aa22.53■■□□□ 1.2
PDLIM2-208ENST00000416159 RIMBP2O15034 1052 aa22.53■■□□□ 1.2
PDLIM2-208ENST00000416159 TBC1D16Q8TBP0 767 aa22.53■■□□□ 1.2
PDLIM2-208ENST00000416159 PODXL2Q9NZ53 605 aa22.53■■□□□ 1.2
PDLIM2-208ENST00000416159 CACNA1FO60840 1977 aa22.52■■□□□ 1.2
PDLIM2-208ENST00000416159 CNTNAP1P78357 1384 aa22.52■■□□□ 1.2
PDLIM2-208ENST00000416159 VAMP4O75379 141 aa22.52■■□□□ 1.2
PDLIM2-208ENST00000416159 FAM9BQ8IZU0 186 aa22.52■■□□□ 1.2
PDLIM2-208ENST00000416159 COL4A1P02462 1669 aa22.52■■□□□ 1.2
PDLIM2-208ENST00000416159 NEURL1BA8MQ27 555 aa22.51■■□□□ 1.19
PDLIM2-208ENST00000416159 FLIIQ13045 1269 aa22.51■■□□□ 1.19
PDLIM2-208ENST00000416159 ANKRD18AQ8IVF6 992 aa22.51■■□□□ 1.19
PDLIM2-208ENST00000416159 CCDC85AQ96PX6 553 aaPredicted RBP22.51■■□□□ 1.19
PDLIM2-208ENST00000416159 DBNDD1Q9H9R9 158 aa22.51■■□□□ 1.19
PDLIM2-208ENST00000416159 HSPA1AP0DMV8 641 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-208ENST00000416159 HSPA1BP0DMV9 641 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-208ENST00000416159 CTSWP56202 376 aa22.5■■□□□ 1.19
PDLIM2-208ENST00000416159 EXOSC9Q06265 439 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-208ENST00000416159 CWF19L2Q2TBE0 894 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-208ENST00000416159 ZC3H12CQ9C0D7 883 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-208ENST00000416159 ANKIB1Q9P2G1 1089 aa22.5■■□□□ 1.19
PDLIM2-208ENST00000416159 GGA1Q9UJY5 639 aa22.5■■□□□ 1.19
PDLIM2-208ENST00000416159 H7C1W4 665 aa22.49■■□□□ 1.19
PDLIM2-208ENST00000416159 DPF2Q92785 391 aa22.49■■□□□ 1.19
PDLIM2-208ENST00000416159 CDC5LQ99459 802 aaKnown RBP22.49■■□□□ 1.19
PDLIM2-208ENST00000416159 CNOT7Q9UIV1 285 aaKnown RBP22.49■■□□□ 1.19
PDLIM2-208ENST00000416159 H7C1D1 291 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms