RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NPHP3Q7Z494 1330 aa14.89□□□□□ -0.03
SCN1B-202ENST00000415950 CALCOCO1Q9P1Z2 691 aa14.89□□□□□ -0.03
SCN1B-202ENST00000415950 PROSER2Q86WR7 435 aaPredicted RBP14.89□□□□□ -0.03
SCN1B-202ENST00000415950 NCOA5Q9HCD5 579 aaKnown RBP14.89□□□□□ -0.03
SCN1B-202ENST00000415950 CBX8Q9HC52 389 aa14.88□□□□□ -0.03
SCN1B-202ENST00000415950 KAT6BQ8WYB5 2073 aa14.88□□□□□ -0.03
SCN1B-202ENST00000415950 SSR1P43307 286 aaKnown RBP14.88□□□□□ -0.03
SCN1B-202ENST00000415950 CDC37L1Q7L3B6 337 aa14.88□□□□□ -0.03
SCN1B-202ENST00000415950 CTAGE5O15320 804 aa14.88□□□□□ -0.03
SCN1B-202ENST00000415950 SLU7O95391 586 aaKnown RBP14.88□□□□□ -0.03
SCN1B-202ENST00000415950 GBP3Q9H0R5 595 aa14.88□□□□□ -0.03
SCN1B-202ENST00000415950 PYCARDQ9ULZ3 195 aa14.88□□□□□ -0.03
SCN1B-202ENST00000415950 AMOTL2Q9Y2J4 779 aa14.88□□□□□ -0.03
SCN1B-202ENST00000415950 JAK2O60674 1132 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 KARSQ15046 597 aaKnown RBP14.87□□□□□ -0.03
SCN1B-202ENST00000415950 ELF2Q15723 593 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 RNF187Q5TA31 235 aaPredicted RBP14.87□□□□□ -0.03
SCN1B-202ENST00000415950 IQCEQ6IPM2 695 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 ZSCAN25Q6NSZ9 544 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 FAM107BQ9H098 131 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 BCCIPQ9P287 314 aaKnown RBP eCLIP14.87□□□□□ -0.03
SCN1B-202ENST00000415950 ARHGEF12Q9NZN5 1544 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 KLF18A0A0U1RQI7 1052 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 METTL24Q5JXM2 366 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 TIGD1Q96MW7 591 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 ZNF213O14771 459 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 SPA17Q15506 151 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 SMAP1Q8IYB5 467 aaPredicted RBP14.87□□□□□ -0.03
SCN1B-202ENST00000415950 EYA1Q99502 592 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 NRBP1Q9UHY1 535 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 SHTN1A0MZ66 631 aa14.87□□□□□ -0.03
SCN1B-202ENST00000415950 MATR3P43243 847 aaKnown RBP eCLIP14.87□□□□□ -0.03
SCN1B-202ENST00000415950 LRRC59Q96AG4 307 aaKnown RBP14.87□□□□□ -0.03
SCN1B-202ENST00000415950 ZNF500O60304 480 aaPredicted RBP14.86□□□□□ -0.03
SCN1B-202ENST00000415950 GSDMDP57764 484 aa14.86□□□□□ -0.03
SCN1B-202ENST00000415950 BICDL1Q6ZP65 573 aa14.86□□□□□ -0.03
SCN1B-202ENST00000415950 NUP88Q99567 741 aaPredicted RBP14.86□□□□□ -0.03
SCN1B-202ENST00000415950 KIAA0556O60303 1618 aa14.86□□□□□ -0.03
SCN1B-202ENST00000415950 SOS1Q07889 1333 aaPredicted RBP14.86□□□□□ -0.03
SCN1B-202ENST00000415950 COPS6Q7L5N1 327 aa14.86□□□□□ -0.03
SCN1B-202ENST00000415950 CTTNBP2Q8WZ74 1663 aa14.86□□□□□ -0.03
SCN1B-202ENST00000415950 TTC21BQ7Z4L5 1316 aa14.86□□□□□ -0.03
SCN1B-202ENST00000415950 GPTP24298 496 aa14.86□□□□□ -0.03
SCN1B-202ENST00000415950 SMARCC1Q92922 1105 aaPredicted RBP14.86□□□□□ -0.03
SCN1B-202ENST00000415950 SRRTQ9BXP5 876 aaKnown RBP14.86□□□□□ -0.03
SCN1B-202ENST00000415950 IL13P35225 146 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 GPATCH11Q8N954 259 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 DYDC1Q8WWB3 177 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 INSRP06213 1382 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 GOLGA6L10A0A0M3HER8 536 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 NEMFO60524 1076 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 SLC4A8Q2Y0W8 1093 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 SPECC1Q5M775 1068 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 UTP14AQ9BVJ6 771 aaKnown RBP14.85□□□□□ -0.03
SCN1B-202ENST00000415950 SGSM2O43147 1006 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 SYKP43405 635 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 AFMP43652 599 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 ASXL2Q76L83 1435 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 RUFY3Q7L099 469 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 CACNA2D4Q7Z3S7 1137 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 RASEFQ8IZ41 740 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 PPIP5K1Q6PFW1 1433 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 CFAP65Q6ZU64 1925 aaKnown RBP14.85□□□□□ -0.03
SCN1B-202ENST00000415950 KDM5BQ9UGL1 1544 aa14.85□□□□□ -0.03
SCN1B-202ENST00000415950 PDIA4P13667 645 aaKnown RBP14.84□□□□□ -0.03
SCN1B-202ENST00000415950 STX17P56962 302 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 NAPBQ9H115 298 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 LZTFL1Q9NQ48 299 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 PUF60Q9UHX1 559 aaKnown RBP14.84□□□□□ -0.03
SCN1B-202ENST00000415950 PTPRTO14522 1441 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 RAPGEF6Q8TEU7 1601 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 TDRD12Q587J7 1177 aaKnown RBP14.84□□□□□ -0.03
SCN1B-202ENST00000415950 XAGE3Q8WTP9 111 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 MRPS27Q92552 414 aaKnown RBP14.84□□□□□ -0.03
SCN1B-202ENST00000415950 HLTFQ14527 1009 aaKnown RBP eCLIP14.84□□□□□ -0.03
SCN1B-202ENST00000415950 ZSCAN29Q8IWY8 852 aaPredicted RBP14.84□□□□□ -0.03
SCN1B-202ENST00000415950 GIMAP7Q8NHV1 300 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 PIK3R4Q99570 1358 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 SBNO2Q9Y2G9 1366 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 IFIT3O14879 490 aaKnown RBP14.84□□□□□ -0.03
SCN1B-202ENST00000415950 PPARDQ03181 441 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 LMBR1LQ6UX01 489 aa14.84□□□□□ -0.03
SCN1B-202ENST00000415950 NPC1L1Q9UHC9 1359 aa14.83□□□□□ -0.03
SCN1B-202ENST00000415950 TICAM2Q86XR7 235 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 ZNF397Q8NF99 534 aaPredicted RBP14.83□□□□□ -0.04
SCN1B-202ENST00000415950 WASF1Q92558 559 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 GRM8O00222 908 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 RANBP6O60518 1105 aaKnown RBP14.83□□□□□ -0.04
SCN1B-202ENST00000415950 GTPBP4Q9BZE4 634 aaKnown RBP14.83□□□□□ -0.04
SCN1B-202ENST00000415950 ZSCAN16Q9H4T2 348 aaPredicted RBP14.83□□□□□ -0.04
SCN1B-202ENST00000415950 CCDC171Q6TFL3 1326 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 DISP1Q96F81 1524 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 MACROD2A1Z1Q3 448 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 CHL1O00533 1208 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 PTH1RQ03431 593 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 ME3Q16798 604 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 C10orf67Q8IYJ2 551 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 TXLNBQ8N3L3 684 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 SLC26A6Q9BXS9 759 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms