RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 NHSQ6T4R5 1651 aa16.27■□□□□ 0.2
SSR4P1-201ENST00000415143 H7C1W4 665 aa16.27■□□□□ 0.2
SSR4P1-201ENST00000415143 UBE3BQ7Z3V4 1068 aa16.27■□□□□ 0.2
SSR4P1-201ENST00000415143 ATG3Q9NT62 314 aa16.27■□□□□ 0.2
SSR4P1-201ENST00000415143 TNS2Q63HR2 1409 aa16.27■□□□□ 0.19
SSR4P1-201ENST00000415143 SASH1O94885 1247 aa16.26■□□□□ 0.19
SSR4P1-201ENST00000415143 KIF6Q6ZMV9 814 aa16.26■□□□□ 0.19
SSR4P1-201ENST00000415143 ZKSCAN1P17029 563 aaPredicted RBP16.25■□□□□ 0.19
SSR4P1-201ENST00000415143 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
SSR4P1-201ENST00000415143 GPR108Q9NPR9 543 aa16.25■□□□□ 0.19
SSR4P1-201ENST00000415143 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
SSR4P1-201ENST00000415143 FBXO3Q9UK99 471 aa16.25■□□□□ 0.19
SSR4P1-201ENST00000415143 QSER1Q2KHR3 1735 aa16.25■□□□□ 0.19
SSR4P1-201ENST00000415143 RFX7Q2KHR2 1363 aa16.25■□□□□ 0.19
SSR4P1-201ENST00000415143 EXOC5O00471 708 aa16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 MAP4K4O95819 1239 aaPredicted RBP16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 APLP1P51693 650 aa16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 CUL4AQ13619 759 aa16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 CWC27Q6UX04 472 aaKnown RBP16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 SLC16A10Q8TF71 515 aa16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 EAF2Q96CJ1 260 aaPredicted RBP16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 ACSBG1Q96GR2 724 aa16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 BTAF1O14981 1849 aa16.24■□□□□ 0.19
SSR4P1-201ENST00000415143 UBR2Q8IWV8 1755 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 ATP5J2-PTCD1G3V325 749 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 PTCD1O75127 700 aaKnown RBP16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 ATP5JP18859 108 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 PSMA5P28066 241 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 IL15P40933 162 aaPredicted RBP16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 TRIM28Q13263 835 aaKnown RBP16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 NBPF10Q6P3W6 841 aaKnown RBP16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 TMX3Q96JJ7 454 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 LSG1Q9H089 658 aaKnown RBP16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 CCDC8Q9H0W5 538 aaPredicted RBP16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 SIL1Q9H173 461 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 AK9Q5TCS8 1911 aa16.23■□□□□ 0.19
SSR4P1-201ENST00000415143 PDIA4P13667 645 aaKnown RBP16.22■□□□□ 0.19
SSR4P1-201ENST00000415143 RFX5P48382 616 aaPredicted RBP16.22■□□□□ 0.19
SSR4P1-201ENST00000415143 CASP7P55210 303 aa16.22■□□□□ 0.19
SSR4P1-201ENST00000415143 PTPN12Q05209 780 aaKnown RBP16.22■□□□□ 0.19
SSR4P1-201ENST00000415143 ZSCAN31Q96LW9 406 aaPredicted RBP16.22■□□□□ 0.19
SSR4P1-201ENST00000415143 FSD1Q9BTV5 496 aa16.22■□□□□ 0.19
SSR4P1-201ENST00000415143 ARFGEF2Q9Y6D5 1785 aa16.22■□□□□ 0.19
SSR4P1-201ENST00000415143 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 CIAO1O76071 339 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 A1BGP04217 495 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 KCNJ4P48050 445 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 TCIRG1Q13488 830 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 TNNI3KQ59H18 835 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 EPHA10Q5JZY3 1008 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 LMBR1LQ6UX01 489 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 DNAJC5GQ8N7S2 189 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 SNRKQ9NRH2 765 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 LRRC4BQ9NT99 713 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 CHMP3Q9Y3E7 222 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 FPGT-TNNI3KV9GXZ4 949 aa16.21■□□□□ 0.19
SSR4P1-201ENST00000415143 PNPLA7Q6ZV29 1317 aa16.2■□□□□ 0.18
SSR4P1-201ENST00000415143 AFDNP55196 1824 aaKnown RBP16.2■□□□□ 0.18
SSR4P1-201ENST00000415143 PRELPP51888 382 aa16.2■□□□□ 0.18
SSR4P1-201ENST00000415143 TNS4Q8IZW8 715 aa16.2■□□□□ 0.18
SSR4P1-201ENST00000415143 KCNB2Q92953 911 aa16.2■□□□□ 0.18
SSR4P1-201ENST00000415143 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.2■□□□□ 0.18
SSR4P1-201ENST00000415143 SNX14Q9Y5W7 946 aa16.2■□□□□ 0.18
SSR4P1-201ENST00000415143 BAG4O95429 457 aaKnown RBP16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 SSFA2P28290 1259 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 PIP4K2AP48426 406 aaPredicted RBP16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 FOXO4P98177 505 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 TFCP2Q12800 502 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 ISCA1Q9BUE6 129 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 AKAP2Q9Y2D5 859 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 CCDC171Q6TFL3 1326 aa16.19■□□□□ 0.18
SSR4P1-201ENST00000415143 KIF3CO14782 793 aa16.18■□□□□ 0.18
SSR4P1-201ENST00000415143 PCCAP05165 728 aaPredicted RBP16.18■□□□□ 0.18
SSR4P1-201ENST00000415143 ANKRD1Q15327 319 aa16.18■□□□□ 0.18
SSR4P1-201ENST00000415143 PIGBQ92521 554 aa16.18■□□□□ 0.18
SSR4P1-201ENST00000415143 BOLA2Q9H3K6 86 aa16.18■□□□□ 0.18
SSR4P1-201ENST00000415143 ZBTB3Q9H5J0 574 aa16.18■□□□□ 0.18
SSR4P1-201ENST00000415143 LIMCH1Q9UPQ0 1083 aa16.18■□□□□ 0.18
SSR4P1-201ENST00000415143 CYP46A1Q9Y6A2 500 aa16.18■□□□□ 0.18
SSR4P1-201ENST00000415143 KRT32Q14532 448 aa16.17■□□□□ 0.18
SSR4P1-201ENST00000415143 CCDC57Q2TAC2 916 aa16.17■□□□□ 0.18
SSR4P1-201ENST00000415143 VPS53Q5VIR6 699 aa16.17■□□□□ 0.18
SSR4P1-201ENST00000415143 PLA2G12BQ9BX93 195 aa16.17■□□□□ 0.18
SSR4P1-201ENST00000415143 SH2B1Q9NRF2 756 aaPredicted RBP16.17■□□□□ 0.18
SSR4P1-201ENST00000415143 EYA2O00167 538 aa16.16■□□□□ 0.18
SSR4P1-201ENST00000415143 NMIQ13287 307 aaPredicted RBP16.16■□□□□ 0.18
SSR4P1-201ENST00000415143 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.16■□□□□ 0.18
SSR4P1-201ENST00000415143 MAP4K1Q92918 833 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms