RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 BRF1Q92994 677 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 MRFAP1L1Q96HT8 127 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 PTPRMP28827 1452 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 NEXMIFQ5QGS0 1516 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 SERPINC1P01008 464 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 TATP17735 454 aaPredicted RBP13.53□□□□□ -0.24
SCN4B-202ENST00000415030 LRMPQ12912 555 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 ZNF710Q8N1W2 664 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 AK9Q5TCS8 1911 aa13.52□□□□□ -0.24
SCN4B-202ENST00000415030 RPS6KB1P23443 525 aa13.52□□□□□ -0.25
SCN4B-202ENST00000415030 NMIQ13287 307 aaPredicted RBP13.52□□□□□ -0.25
SCN4B-202ENST00000415030 LARP1Q6PKG0 1096 aaKnown RBP13.52□□□□□ -0.25
SCN4B-202ENST00000415030 BBXQ8WY36 941 aaPredicted RBP13.52□□□□□ -0.25
SCN4B-202ENST00000415030 ACBD3Q9H3P7 528 aa13.52□□□□□ -0.25
SCN4B-202ENST00000415030 DNAJC2Q99543 621 aaKnown RBP13.52□□□□□ -0.25
SCN4B-202ENST00000415030 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.25
SCN4B-202ENST00000415030 BTBD11A6QL63 1104 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 CTIFO43310 598 aaKnown RBP13.51□□□□□ -0.25
SCN4B-202ENST00000415030 NCBP1Q09161 790 aaKnown RBP13.51□□□□□ -0.25
SCN4B-202ENST00000415030 MAP3K19Q56UN5 1328 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 CDC42BPGQ6DT37 1551 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 ARHGEF40Q8TER5 1519 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 SLC27A2O14975 620 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 TMC6Q7Z403 805 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 SIL1Q9H173 461 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 HOXB7P09629 217 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 IMPACTQ9P2X3 320 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 FAM173BQ6P4H8 233 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 EYA1Q99502 592 aa13.51□□□□□ -0.25
SCN4B-202ENST00000415030 CAMSAP1Q5T5Y3 1602 aa13.5□□□□□ -0.25
SCN4B-202ENST00000415030 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
SCN4B-202ENST00000415030 AIMP1Q12904 312 aaKnown RBP13.5□□□□□ -0.25
SCN4B-202ENST00000415030 TRIM29Q14134 588 aa13.5□□□□□ -0.25
SCN4B-202ENST00000415030 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
SCN4B-202ENST00000415030 TCEANC2Q96MN5 208 aa13.5□□□□□ -0.25
SCN4B-202ENST00000415030 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
SCN4B-202ENST00000415030 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
SCN4B-202ENST00000415030 GOLGA6L9A6NEM1 432 aa13.5□□□□□ -0.25
SCN4B-202ENST00000415030 LRRC8AQ8IWT6 810 aa13.5□□□□□ -0.25
SCN4B-202ENST00000415030 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
SCN4B-202ENST00000415030 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.5□□□□□ -0.25
SCN4B-202ENST00000415030 V9GYY5 206 aaPredicted RBP13.5□□□□□ -0.25
SCN4B-202ENST00000415030 URI1O94763 535 aaPredicted RBP13.49□□□□□ -0.25
SCN4B-202ENST00000415030 HSP90B2PQ58FF3 399 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
SCN4B-202ENST00000415030 TXLNBQ8N3L3 684 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 AOPEPQ8N6M6 819 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 KCNF1Q9H3M0 494 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 DDX41Q9UJV9 622 aaKnown RBP13.49□□□□□ -0.25
SCN4B-202ENST00000415030 NEO1Q92859 1461 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 LEKR1Q6ZMV7 388 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 RALYLQ86SE5 291 aaKnown RBP13.49□□□□□ -0.25
SCN4B-202ENST00000415030 PI4K2BQ8TCG2 481 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 MRPS27Q92552 414 aaKnown RBP13.49□□□□□ -0.25
SCN4B-202ENST00000415030 PPP1R1BQ9UD71 204 aaPredicted RBP13.49□□□□□ -0.25
SCN4B-202ENST00000415030 TPCN1Q9ULQ1 816 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 SLC3A2P08195 630 aaKnown RBP13.49□□□□□ -0.25
SCN4B-202ENST00000415030 PTH1RQ03431 593 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 LLPHQ9BRT6 129 aaKnown RBP13.49□□□□□ -0.25
SCN4B-202ENST00000415030 PHAXQ9H814 394 aaKnown RBP13.49□□□□□ -0.25
SCN4B-202ENST00000415030 CHPF2Q9P2E5 772 aa13.49□□□□□ -0.25
SCN4B-202ENST00000415030 FAM160A1Q05DH4 1040 aa13.48□□□□□ -0.25
SCN4B-202ENST00000415030 TRDNQ13061 729 aa13.48□□□□□ -0.25
SCN4B-202ENST00000415030 ELF2Q15723 593 aa13.48□□□□□ -0.25
SCN4B-202ENST00000415030 CTNNA3Q9UI47 895 aa13.48□□□□□ -0.25
SCN4B-202ENST00000415030 ZNF215Q9UL58 517 aaPredicted RBP13.48□□□□□ -0.25
SCN4B-202ENST00000415030 PDILTQ8N807 584 aa13.48□□□□□ -0.25
SCN4B-202ENST00000415030 MAP3K2Q9Y2U5 619 aa13.48□□□□□ -0.25
SCN4B-202ENST00000415030 CFAP100Q494V2 611 aa13.48□□□□□ -0.25
SCN4B-202ENST00000415030 CACTINQ8WUQ7 758 aaKnown RBP13.48□□□□□ -0.25
SCN4B-202ENST00000415030 CD163L1Q9NR16 1453 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 ERLIN1O75477 346 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 POLA2Q14181 598 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 IL17RAQ96F46 866 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 EIF3JO75822 258 aaKnown RBP13.47□□□□□ -0.25
SCN4B-202ENST00000415030 LARGE1O95461 756 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 Q6ZUG5 572 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 NRBP1Q9UHY1 535 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 DACH1Q9UI36 760 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 SALL3Q9BXA9 1300 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 NR1I2O75469 434 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 FUCA2Q9BTY2 467 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 ADCK5Q3MIX3 580 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 PLA2G4DQ86XP0 818 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 KCNG4Q8TDN1 519 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
SCN4B-202ENST00000415030 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
SCN4B-202ENST00000415030 PLEKHG3A1L390 1219 aa13.46□□□□□ -0.25
SCN4B-202ENST00000415030 NBPF7P0C2Y1 421 aaPredicted RBP13.46□□□□□ -0.25
SCN4B-202ENST00000415030 TOP1P11387 765 aaKnown RBP13.46□□□□□ -0.25
SCN4B-202ENST00000415030 ARHGAP29Q52LW3 1261 aa13.46□□□□□ -0.25
SCN4B-202ENST00000415030 SARM1Q6SZW1 724 aa13.46□□□□□ -0.25
SCN4B-202ENST00000415030 MAP4K1Q92918 833 aa13.46□□□□□ -0.25
SCN4B-202ENST00000415030 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
SCN4B-202ENST00000415030 NAA16Q6N069 864 aaPredicted RBP13.46□□□□□ -0.25
SCN4B-202ENST00000415030 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms