RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
CNOT4-204ENST00000414802 SPON1Q9HCB6 807 aa16.4■□□□□ 0.22
CNOT4-204ENST00000414802 PNMA6EA0A0J9YXQ4 647 aa16.4■□□□□ 0.22
CNOT4-204ENST00000414802 RABL6Q3YEC7 729 aaPredicted RBP16.4■□□□□ 0.22
CNOT4-204ENST00000414802 KLHL34Q8N239 644 aa16.4■□□□□ 0.22
CNOT4-204ENST00000414802 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
CNOT4-204ENST00000414802 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
CNOT4-204ENST00000414802 GREM2Q9H772 168 aa16.39■□□□□ 0.21
CNOT4-204ENST00000414802 HDAC5Q9UQL6 1122 aa16.39■□□□□ 0.21
CNOT4-204ENST00000414802 LRP5O75197 1615 aa16.39■□□□□ 0.21
CNOT4-204ENST00000414802 SLX4Q8IY92 1834 aa16.38■□□□□ 0.21
CNOT4-204ENST00000414802 SIRT2Q8IXJ6 389 aa16.38■□□□□ 0.21
CNOT4-204ENST00000414802 BRIP1Q9BX63 1249 aa16.38■□□□□ 0.21
CNOT4-204ENST00000414802 SRGAP3O43295 1099 aa16.37■□□□□ 0.21
CNOT4-204ENST00000414802 CSF1RP07333 972 aa16.37■□□□□ 0.21
CNOT4-204ENST00000414802 HSP90B1P14625 803 aaKnown RBP16.37■□□□□ 0.21
CNOT4-204ENST00000414802 SEC31BQ9NQW1 1179 aa16.37■□□□□ 0.21
CNOT4-204ENST00000414802 PPP1R1BQ9UD71 204 aaPredicted RBP16.37■□□□□ 0.21
CNOT4-204ENST00000414802 ATP8B2P98198 1209 aa16.37■□□□□ 0.21
CNOT4-204ENST00000414802 AAMPQ13685 434 aa16.37■□□□□ 0.21
CNOT4-204ENST00000414802 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
CNOT4-204ENST00000414802 KLHDC4Q8TBB5 520 aa16.37■□□□□ 0.21
CNOT4-204ENST00000414802 ITGA6P23229 1130 aa16.36■□□□□ 0.21
CNOT4-204ENST00000414802 CHRNA5P30532 468 aa16.36■□□□□ 0.21
CNOT4-204ENST00000414802 MTX1Q13505 466 aa16.36■□□□□ 0.21
CNOT4-204ENST00000414802 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
CNOT4-204ENST00000414802 ZNF594Q96JF6 807 aaPredicted RBP16.36■□□□□ 0.21
CNOT4-204ENST00000414802 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
CNOT4-204ENST00000414802 LRRC37AA6NMS7 1700 aa16.36■□□□□ 0.21
CNOT4-204ENST00000414802 CRY2Q49AN0 593 aa16.35■□□□□ 0.21
CNOT4-204ENST00000414802 C2CD5Q86YS7 1000 aa16.35■□□□□ 0.21
CNOT4-204ENST00000414802 GTF3C3Q9Y5Q9 886 aa16.35■□□□□ 0.21
CNOT4-204ENST00000414802 RTL9Q8NET4 1388 aa16.35■□□□□ 0.21
CNOT4-204ENST00000414802 PDE6BP35913 854 aa16.34■□□□□ 0.21
CNOT4-204ENST00000414802 RFX5P48382 616 aaPredicted RBP16.34■□□□□ 0.21
CNOT4-204ENST00000414802 POLA2Q14181 598 aa16.34■□□□□ 0.21
CNOT4-204ENST00000414802 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
CNOT4-204ENST00000414802 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
CNOT4-204ENST00000414802 KLRG2A4D1S0 409 aaPredicted RBP16.34■□□□□ 0.21
CNOT4-204ENST00000414802 IFIT5Q13325 482 aaKnown RBP16.34■□□□□ 0.21
CNOT4-204ENST00000414802 CCDC57Q2TAC2 916 aa16.34■□□□□ 0.21
CNOT4-204ENST00000414802 SLC51AQ86UW1 340 aa16.34■□□□□ 0.21
CNOT4-204ENST00000414802 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
CNOT4-204ENST00000414802 SSH3Q8TE77 659 aa16.34■□□□□ 0.21
CNOT4-204ENST00000414802 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.2
CNOT4-204ENST00000414802 TAF7LQ5H9L4 462 aa16.33■□□□□ 0.2
CNOT4-204ENST00000414802 DDX46Q7L014 1031 aaKnown RBP16.33■□□□□ 0.2
CNOT4-204ENST00000414802 CELF1Q92879 486 aaKnown RBP16.33■□□□□ 0.2
CNOT4-204ENST00000414802 SIL1Q9H173 461 aa16.33■□□□□ 0.2
CNOT4-204ENST00000414802 SRCAPQ6ZRS2 3230 aa16.33■□□□□ 0.2
CNOT4-204ENST00000414802 HMMRO75330 724 aa16.32■□□□□ 0.2
CNOT4-204ENST00000414802 IGHDP01880 384 aa16.32■□□□□ 0.2
CNOT4-204ENST00000414802 SRGNP10124 158 aa16.32■□□□□ 0.2
CNOT4-204ENST00000414802 PTPN12Q05209 780 aaKnown RBP16.32■□□□□ 0.2
CNOT4-204ENST00000414802 ERICH6BQ5W0A0 696 aa16.32■□□□□ 0.2
CNOT4-204ENST00000414802 B4GALNT3Q6L9W6 998 aa16.32■□□□□ 0.2
CNOT4-204ENST00000414802 ZNF622Q969S3 477 aaKnown RBP eCLIP16.32■□□□□ 0.22e-6■□□□□ 10.1
CNOT4-204ENST00000414802 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
CNOT4-204ENST00000414802 ARFGEF1Q9Y6D6 1849 aa16.32■□□□□ 0.2
CNOT4-204ENST00000414802 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
CNOT4-204ENST00000414802 H0YIN7 160 aa16.31■□□□□ 0.2
CNOT4-204ENST00000414802 DPEP1P16444 411 aa16.31■□□□□ 0.2
CNOT4-204ENST00000414802 RBM17Q96I25 401 aaKnown RBP16.31■□□□□ 0.2
CNOT4-204ENST00000414802 PPP4R2Q9NY27 417 aa16.31■□□□□ 0.2
CNOT4-204ENST00000414802 EXOC6BQ9Y2D4 811 aa16.31■□□□□ 0.2
CNOT4-204ENST00000414802 NPR1P16066 1061 aa16.3■□□□□ 0.2
CNOT4-204ENST00000414802 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
CNOT4-204ENST00000414802 MASTLQ96GX5 879 aa16.3■□□□□ 0.2
CNOT4-204ENST00000414802 PUS3Q9BZE2 481 aaKnown RBP16.3■□□□□ 0.2
CNOT4-204ENST00000414802 APBB1O00213 710 aa16.3■□□□□ 0.2
CNOT4-204ENST00000414802 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
CNOT4-204ENST00000414802 GRAPQ13588 217 aa16.3■□□□□ 0.2
CNOT4-204ENST00000414802 GRAPLQ8TC17 118 aaPredicted RBP16.3■□□□□ 0.2
CNOT4-204ENST00000414802 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
CNOT4-204ENST00000414802 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
CNOT4-204ENST00000414802 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
CNOT4-204ENST00000414802 SURF6O75683 361 aaKnown RBP16.29■□□□□ 0.2
CNOT4-204ENST00000414802 HOXA10P31260 410 aaPredicted RBP16.29■□□□□ 0.2
CNOT4-204ENST00000414802 LRRC24Q50LG9 513 aa16.29■□□□□ 0.2
CNOT4-204ENST00000414802 ANKRD18AQ8IVF6 992 aa16.29■□□□□ 0.2
CNOT4-204ENST00000414802 FHDC1Q9C0D6 1143 aaPredicted RBP16.29■□□□□ 0.2
CNOT4-204ENST00000414802 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
CNOT4-204ENST00000414802 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
CNOT4-204ENST00000414802 LTBP1Q14766 1721 aa16.29■□□□□ 0.2
CNOT4-204ENST00000414802 ARAP2Q8WZ64 1704 aa16.28■□□□□ 0.2
CNOT4-204ENST00000414802 IGHMBP2P38935 993 aaKnown RBP16.28■□□□□ 0.2
CNOT4-204ENST00000414802 STYK1Q6J9G0 422 aa16.28■□□□□ 0.2
CNOT4-204ENST00000414802 COPRSQ9NQ92 184 aa16.28■□□□□ 0.2
CNOT4-204ENST00000414802 OS9Q13438 667 aaPredicted RBP16.27■□□□□ 0.2
CNOT4-204ENST00000414802 CRAMP1Q96RY5 1269 aa16.27■□□□□ 0.2
CNOT4-204ENST00000414802 CNNM1Q9NRU3 951 aa16.27■□□□□ 0.2
CNOT4-204ENST00000414802 CCDC88AQ3V6T2 1871 aa16.27■□□□□ 0.19
CNOT4-204ENST00000414802 KCNA3P22001 575 aa16.27■□□□□ 0.19
CNOT4-204ENST00000414802 TGFB2P61812 414 aa16.27■□□□□ 0.19
CNOT4-204ENST00000414802 RPS8P62241 208 aaKnown RBP16.27■□□□□ 0.19
CNOT4-204ENST00000414802 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.19
CNOT4-204ENST00000414802 MPHOSPH8Q99549 860 aa16.27■□□□□ 0.19
CNOT4-204ENST00000414802 BCL11AQ9H165 835 aa16.27■□□□□ 0.19
CNOT4-204ENST00000414802 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.19
CNOT4-204ENST00000414802 PDZRN3Q9UPQ7 1066 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms