RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 GRAPQ13588 217 aa20.78■□□□□ 0.92
LINC00398-201ENST00000414407 TTLL11Q8NHH1 800 aa20.78■□□□□ 0.92
LINC00398-201ENST00000414407 GRAPLQ8TC17 118 aaPredicted RBP20.78■□□□□ 0.92
LINC00398-201ENST00000414407 C7orf43Q8WVR3 580 aa20.78■□□□□ 0.92
LINC00398-201ENST00000414407 USP44Q9H0E7 712 aa20.78■□□□□ 0.92
LINC00398-201ENST00000414407 RTL9Q8NET4 1388 aa20.77■□□□□ 0.92
LINC00398-201ENST00000414407 CSF1RP07333 972 aa20.77■□□□□ 0.92
LINC00398-201ENST00000414407 NBPF7P0C2Y1 421 aaPredicted RBP20.77■□□□□ 0.92
LINC00398-201ENST00000414407 MS4A1P11836 297 aa20.77■□□□□ 0.92
LINC00398-201ENST00000414407 TMC4Q7Z404 712 aa20.77■□□□□ 0.92
LINC00398-201ENST00000414407 CC2D2BQ6DHV5 1058 aa20.76■□□□□ 0.91
LINC00398-201ENST00000414407 DZIP1LQ8IYY4 767 aaKnown RBP20.76■□□□□ 0.91
LINC00398-201ENST00000414407 HDAC5Q9UQL6 1122 aa20.76■□□□□ 0.91
LINC00398-201ENST00000414407 SLX4Q8IY92 1834 aa20.76■□□□□ 0.91
LINC00398-201ENST00000414407 C21orf2O43822 256 aa20.75■□□□□ 0.91
LINC00398-201ENST00000414407 FOXO4P98177 505 aa20.75■□□□□ 0.91
LINC00398-201ENST00000414407 GRIPAP1Q4V328 841 aa20.75■□□□□ 0.91
LINC00398-201ENST00000414407 FTSJ3Q8IY81 847 aaKnown RBP20.75■□□□□ 0.91
LINC00398-201ENST00000414407 CLUAP1Q96AJ1 413 aa20.75■□□□□ 0.91
LINC00398-201ENST00000414407 PPEF1O14829 653 aaPredicted RBP20.74■□□□□ 0.91
LINC00398-201ENST00000414407 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.74■□□□□ 0.91
LINC00398-201ENST00000414407 TNNQ9UQP3 1299 aa20.74■□□□□ 0.91
LINC00398-201ENST00000414407 ARHGAP27Q6ZUM4 889 aa20.73■□□□□ 0.91
LINC00398-201ENST00000414407 SUCLG2Q96I99 432 aa20.73■□□□□ 0.91
LINC00398-201ENST00000414407 ATP6V0A2Q9Y487 856 aa20.73■□□□□ 0.91
LINC00398-201ENST00000414407 MYH3P11055 1940 aa20.72■□□□□ 0.91
LINC00398-201ENST00000414407 GNAI3P08754 354 aa20.72■□□□□ 0.91
LINC00398-201ENST00000414407 RPS8P62241 208 aaKnown RBP20.72■□□□□ 0.91
LINC00398-201ENST00000414407 CCDC93Q567U6 631 aa20.72■□□□□ 0.91
LINC00398-201ENST00000414407 SP8Q8IXZ3 490 aa20.72■□□□□ 0.91
LINC00398-201ENST00000414407 RTKN2Q8IZC4 609 aa20.72■□□□□ 0.91
LINC00398-201ENST00000414407 TMEM57Q8N5G2 664 aa20.72■□□□□ 0.91
LINC00398-201ENST00000414407 CELF1Q92879 486 aaKnown RBP20.72■□□□□ 0.91
LINC00398-201ENST00000414407 KAZALD1Q96I82 304 aa20.72■□□□□ 0.91
LINC00398-201ENST00000414407 CDC5LQ99459 802 aaKnown RBP20.72■□□□□ 0.91
LINC00398-201ENST00000414407 TMX4Q9H1E5 349 aaPredicted RBP20.72■□□□□ 0.91
LINC00398-201ENST00000414407 GREM2Q9H772 168 aa20.72■□□□□ 0.91
LINC00398-201ENST00000414407 UBTFL1P0CB47 393 aaPredicted RBP20.71■□□□□ 0.91
LINC00398-201ENST00000414407 RABL6Q3YEC7 729 aaPredicted RBP20.71■□□□□ 0.91
LINC00398-201ENST00000414407 EPHA10Q5JZY3 1008 aa20.71■□□□□ 0.91
LINC00398-201ENST00000414407 LMBR1LQ6UX01 489 aa20.71■□□□□ 0.91
LINC00398-201ENST00000414407 SEC31BQ9NQW1 1179 aa20.71■□□□□ 0.91
LINC00398-201ENST00000414407 ZNF219Q9P2Y4 722 aaPredicted RBP20.71■□□□□ 0.91
LINC00398-201ENST00000414407 LTBP3Q9NS15 1303 aa20.71■□□□□ 0.91
LINC00398-201ENST00000414407 RLBP1P12271 317 aa20.7■□□□□ 0.9
LINC00398-201ENST00000414407 ANKRD18AQ8IVF6 992 aa20.7■□□□□ 0.9
LINC00398-201ENST00000414407 CCDC85AQ96PX6 553 aaPredicted RBP20.7■□□□□ 0.9
LINC00398-201ENST00000414407 CACNA1SQ13698 1873 aa20.69■□□□□ 0.9
LINC00398-201ENST00000414407 ITGA6P23229 1130 aa20.69■□□□□ 0.9
LINC00398-201ENST00000414407 MEIS3Q99687 375 aa20.69■□□□□ 0.9
LINC00398-201ENST00000414407 SNED1Q8TER0 1413 aa20.69■□□□□ 0.9
LINC00398-201ENST00000414407 UTRNP46939 3433 aa20.68■□□□□ 0.9
LINC00398-201ENST00000414407 ANKRD18BA2A2Z9 1011 aa20.68■□□□□ 0.9
LINC00398-201ENST00000414407 NFKBIEO00221 500 aa20.68■□□□□ 0.9
LINC00398-201ENST00000414407 IFIT5Q13325 482 aaKnown RBP20.68■□□□□ 0.9
LINC00398-201ENST00000414407 PDE3AQ14432 1141 aa20.68■□□□□ 0.9
LINC00398-201ENST00000414407 FAM161AQ3B820 660 aa20.68■□□□□ 0.9
LINC00398-201ENST00000414407 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
LINC00398-201ENST00000414407 PLIN1O60240 522 aa20.67■□□□□ 0.9
LINC00398-201ENST00000414407 OLFM4Q6UX06 510 aa20.67■□□□□ 0.9
LINC00398-201ENST00000414407 ITPRIPQ8IWB1 547 aa20.67■□□□□ 0.9
LINC00398-201ENST00000414407 ANKRD44Q8N8A2 993 aa20.67■□□□□ 0.9
LINC00398-201ENST00000414407 PSMD1Q99460 953 aa20.67■□□□□ 0.9
LINC00398-201ENST00000414407 TAOK3Q9H2K8 898 aa20.67■□□□□ 0.9
LINC00398-201ENST00000414407 BSDC1Q9NW68 430 aaPredicted RBP20.67■□□□□ 0.9
LINC00398-201ENST00000414407 IGHMBP2P38935 993 aaKnown RBP20.66■□□□□ 0.9
LINC00398-201ENST00000414407 FKBP4Q02790 459 aaKnown RBP eCLIP20.66■□□□□ 0.9
LINC00398-201ENST00000414407 CCDC57Q2TAC2 916 aa20.66■□□□□ 0.9
LINC00398-201ENST00000414407 PANK1Q8TE04 598 aa20.66■□□□□ 0.9
LINC00398-201ENST00000414407 CHMP3Q9Y3E7 222 aa20.66■□□□□ 0.9
LINC00398-201ENST00000414407 FER1L6Q2WGJ9 1857 aa20.66■□□□□ 0.9
LINC00398-201ENST00000414407 TAF1P21675 1872 aa20.64■□□□□ 0.9
LINC00398-201ENST00000414407 LRRC37AA6NMS7 1700 aa20.64■□□□□ 0.9
LINC00398-201ENST00000414407 COL4A1P02462 1669 aa20.64■□□□□ 0.9
LINC00398-201ENST00000414407 ZBTB7BO15156 539 aaPredicted RBP20.64■□□□□ 0.89
LINC00398-201ENST00000414407 LMNB1P20700 586 aa20.64■□□□□ 0.89
LINC00398-201ENST00000414407 MVPQ14764 893 aaKnown RBP20.64■□□□□ 0.89
LINC00398-201ENST00000414407 RTFDC1Q9BY42 306 aaPredicted RBP20.64■□□□□ 0.89
LINC00398-201ENST00000414407 LRRFIP2Q9Y608 721 aaKnown RBP20.64■□□□□ 0.89
LINC00398-201ENST00000414407 GNAI2P04899 355 aa20.63■□□□□ 0.89
LINC00398-201ENST00000414407 RASSF7Q02833 373 aa20.63■□□□□ 0.89
LINC00398-201ENST00000414407 MPNDQ8N594 471 aa20.63■□□□□ 0.89
LINC00398-201ENST00000414407 SUPT20HQ8NEM7 779 aa20.63■□□□□ 0.89
LINC00398-201ENST00000414407 MPHOSPH8Q99549 860 aa20.63■□□□□ 0.89
LINC00398-201ENST00000414407 VPS33BQ9H267 617 aa20.63■□□□□ 0.89
LINC00398-201ENST00000414407 CHMP4BQ9H444 224 aaKnown RBP20.63■□□□□ 0.89
LINC00398-201ENST00000414407 PODXL2Q9NZ53 605 aa20.63■□□□□ 0.89
LINC00398-201ENST00000414407 CHD4Q14839 1912 aa20.63■□□□□ 0.89
LINC00398-201ENST00000414407 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
LINC00398-201ENST00000414407 DPP8Q6V1X1 898 aaPredicted RBP20.62■□□□□ 0.89
LINC00398-201ENST00000414407 DDX19BQ9UMR2 479 aa20.62■□□□□ 0.89
LINC00398-201ENST00000414407 MTX1Q13505 466 aa20.61■□□□□ 0.89
LINC00398-201ENST00000414407 TAF7LQ5H9L4 462 aa20.61■□□□□ 0.89
LINC00398-201ENST00000414407 MINPP1Q9UNW1 487 aa20.61■□□□□ 0.89
LINC00398-201ENST00000414407 PRELPP51888 382 aa20.6■□□□□ 0.89
LINC00398-201ENST00000414407 C9orf131Q5VYM1 1079 aa20.6■□□□□ 0.89
LINC00398-201ENST00000414407 SLC51AQ86UW1 340 aa20.6■□□□□ 0.89
LINC00398-201ENST00000414407 NSFL1CQ9UNZ2 370 aaKnown RBP20.6■□□□□ 0.89
LINC00398-201ENST00000414407 COG6Q9Y2V7 657 aa20.6■□□□□ 0.89
LINC00398-201ENST00000414407 ZC3H4Q9UPT8 1303 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms