RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 COL4A5P29400 1685 aa33.74■■■□□ 2.99
VEGFA-207ENST00000413642 CWF19L2Q2TBE0 894 aaKnown RBP33.73■■■□□ 2.99
VEGFA-207ENST00000413642 GRIPAP1Q4V328 841 aa33.73■■■□□ 2.99
VEGFA-207ENST00000413642 TMX4Q9H1E5 349 aaPredicted RBP33.73■■■□□ 2.99
VEGFA-207ENST00000413642 FZD9O00144 591 aa33.72■■■□□ 2.99
VEGFA-207ENST00000413642 COL4A1P02462 1669 aa33.71■■■□□ 2.99
VEGFA-207ENST00000413642 LARGE2Q8N3Y3 721 aa33.7■■■□□ 2.99
VEGFA-207ENST00000413642 JDP2Q8WYK2 163 aa33.7■■■□□ 2.99
VEGFA-207ENST00000413642 NEXNQ0ZGT2 675 aa33.69■■■□□ 2.98
VEGFA-207ENST00000413642 FKBP5Q13451 457 aaPredicted RBP33.69■■■□□ 2.98
VEGFA-207ENST00000413642 DPP8Q6V1X1 898 aaPredicted RBP33.69■■■□□ 2.98
VEGFA-207ENST00000413642 MPNDQ8N594 471 aa33.69■■■□□ 2.98
VEGFA-207ENST00000413642 CCDC85AQ96PX6 553 aaPredicted RBP33.69■■■□□ 2.98
VEGFA-207ENST00000413642 SEC31BQ9NQW1 1179 aa33.69■■■□□ 2.98
VEGFA-207ENST00000413642 WDR90Q96KV7 1748 aa33.69■■■□□ 2.98
VEGFA-207ENST00000413642 NEURL1BA8MQ27 555 aa33.68■■■□□ 2.98
VEGFA-207ENST00000413642 CCER2I3L3R5 266 aa33.68■■■□□ 2.98
VEGFA-207ENST00000413642 AOC3Q16853 763 aa33.68■■■□□ 2.98
VEGFA-207ENST00000413642 PPIP5K2O43314 1243 aa33.67■■■□□ 2.98
VEGFA-207ENST00000413642 RTFDC1Q9BY42 306 aaPredicted RBP33.67■■■□□ 2.98
VEGFA-207ENST00000413642 PDE8AO60658 829 aa33.66■■■□□ 2.98
VEGFA-207ENST00000413642 TAF1P21675 1872 aa33.66■■■□□ 2.98
VEGFA-207ENST00000413642 FSTL1Q12841 308 aa33.66■■■□□ 2.98
VEGFA-207ENST00000413642 SMC1BQ8NDV3 1235 aa33.65■■■□□ 2.98
VEGFA-207ENST00000413642 DNAAF4Q8WXU2 420 aa33.65■■■□□ 2.98
VEGFA-207ENST00000413642 L3MBTL3Q96JM7 780 aaPredicted RBP33.65■■■□□ 2.98
VEGFA-207ENST00000413642 POTEIP0CG38 1075 aa33.64■■■□□ 2.98
VEGFA-207ENST00000413642 POTEJP0CG39 1038 aa33.64■■■□□ 2.98
VEGFA-207ENST00000413642 CDHR2Q9BYE9 1310 aa33.63■■■□□ 2.97
VEGFA-207ENST00000413642 F6X3S4 739 aa33.63■■■□□ 2.97
VEGFA-207ENST00000413642 RPS8P62241 208 aaKnown RBP33.63■■■□□ 2.97
VEGFA-207ENST00000413642 TMC4Q7Z404 712 aa33.63■■■□□ 2.97
VEGFA-207ENST00000413642 HSP90B1P14625 803 aaKnown RBP33.62■■■□□ 2.97
VEGFA-207ENST00000413642 NIM1KQ8IY84 436 aa33.62■■■□□ 2.97
VEGFA-207ENST00000413642 SUPT20HQ8NEM7 779 aa33.62■■■□□ 2.97
VEGFA-207ENST00000413642 GJA3Q9Y6H8 435 aa33.62■■■□□ 2.97
VEGFA-207ENST00000413642 H7C1W4 665 aa33.61■■■□□ 2.97
VEGFA-207ENST00000413642 EIF6P56537 245 aaKnown RBP33.61■■■□□ 2.97
VEGFA-207ENST00000413642 CCDC152Q4G0S7 254 aa33.61■■■□□ 2.97
VEGFA-207ENST00000413642 NSFL1CQ9UNZ2 370 aaKnown RBP33.61■■■□□ 2.97
VEGFA-207ENST00000413642 GPSM2P81274 684 aa33.6■■■□□ 2.97
VEGFA-207ENST00000413642 GCKRQ14397 625 aa33.6■■■□□ 2.97
VEGFA-207ENST00000413642 UBE3BQ7Z3V4 1068 aa33.6■■■□□ 2.97
VEGFA-207ENST00000413642 CDCA7LQ96GN5 454 aa33.6■■■□□ 2.97
VEGFA-207ENST00000413642 TAF1DQ9H5J8 278 aaPredicted RBP33.6■■■□□ 2.97
VEGFA-207ENST00000413642 HTRA3P83110 453 aa33.59■■■□□ 2.97
VEGFA-207ENST00000413642 GPC2Q8N158 579 aa33.59■■■□□ 2.97
VEGFA-207ENST00000413642 IQCA1LA6NCM1 817 aa33.58■■■□□ 2.97
VEGFA-207ENST00000413642 APLP1P51693 650 aa33.58■■■□□ 2.97
VEGFA-207ENST00000413642 CTSWP56202 376 aa33.58■■■□□ 2.97
VEGFA-207ENST00000413642 SLFN5Q08AF3 891 aa33.58■■■□□ 2.97
VEGFA-207ENST00000413642 KIAA2012Q0VF49 1180 aa33.58■■■□□ 2.97
VEGFA-207ENST00000413642 VPS33BQ9H267 617 aa33.58■■■□□ 2.97
VEGFA-207ENST00000413642 E9PSI1 815 aa33.57■■■□□ 2.96
VEGFA-207ENST00000413642 LINS1Q8NG48 757 aa33.57■■■□□ 2.96
VEGFA-207ENST00000413642 TTLL11Q8NHH1 800 aa33.57■■■□□ 2.96
VEGFA-207ENST00000413642 DUOX1Q9NRD9 1551 aa33.56■■■□□ 2.96
VEGFA-207ENST00000413642 POLLQ9UGP5 575 aa33.56■■■□□ 2.96
VEGFA-207ENST00000413642 HACL1Q9UJ83 578 aa33.56■■■□□ 2.96
VEGFA-207ENST00000413642 CASP7P55210 303 aa33.55■■■□□ 2.96
VEGFA-207ENST00000413642 GPR101Q96P66 508 aaPredicted RBP33.55■■■□□ 2.96
VEGFA-207ENST00000413642 ZNRF3Q9ULT6 936 aa33.55■■■□□ 2.96
VEGFA-207ENST00000413642 BEND3Q5T5X7 828 aa33.54■■■□□ 2.96
VEGFA-207ENST00000413642 GREM2Q9H772 168 aa33.54■■■□□ 2.96
VEGFA-207ENST00000413642 C6orf229H3BNL8 230 aa33.53■■■□□ 2.96
VEGFA-207ENST00000413642 RIMBP2O15034 1052 aa33.53■■■□□ 2.96
VEGFA-207ENST00000413642 EPHX2P34913 555 aa33.53■■■□□ 2.96
VEGFA-207ENST00000413642 CXCL9Q07325 125 aa33.53■■■□□ 2.96
VEGFA-207ENST00000413642 LRRC37AA6NMS7 1700 aa33.53■■■□□ 2.96
VEGFA-207ENST00000413642 EAPPQ56P03 285 aaPredicted RBP33.52■■■□□ 2.96
VEGFA-207ENST00000413642 CHADLQ6NUI6 762 aa33.52■■■□□ 2.96
VEGFA-207ENST00000413642 MIER1Q8N108 512 aa33.52■■■□□ 2.96
VEGFA-207ENST00000413642 ANKRD18AQ8IVF6 992 aa33.51■■■□□ 2.95
VEGFA-207ENST00000413642 TBC1D16Q8TBP0 767 aa33.51■■■□□ 2.95
VEGFA-207ENST00000413642 SCNN1DP51172 638 aa33.5■■■□□ 2.95
VEGFA-207ENST00000413642 WASHC4Q2M389 1173 aa33.5■■■□□ 2.95
VEGFA-207ENST00000413642 DIEXFQ68CQ4 756 aaKnown RBP33.5■■■□□ 2.95
VEGFA-207ENST00000413642 MRPL50Q8N5N7 158 aaKnown RBP33.5■■■□□ 2.95
VEGFA-207ENST00000413642 YDJCA8MPS7 323 aa33.49■■■□□ 2.95
VEGFA-207ENST00000413642 RAD17O75943 681 aa33.49■■■□□ 2.95
VEGFA-207ENST00000413642 EPS15P42566 896 aa33.49■■■□□ 2.95
VEGFA-207ENST00000413642 PLA2G12BQ9BX93 195 aa33.48■■■□□ 2.95
VEGFA-207ENST00000413642 SLC4A10Q6U841 1118 aa33.47■■■□□ 2.95
VEGFA-207ENST00000413642 LDHDQ86WU2 507 aa33.47■■■□□ 2.95
VEGFA-207ENST00000413642 DNAJC5GQ8N7S2 189 aa33.47■■■□□ 2.95
VEGFA-207ENST00000413642 DBNDD1Q9H9R9 158 aa33.47■■■□□ 2.95
VEGFA-207ENST00000413642 ANKIB1Q9P2G1 1089 aa33.47■■■□□ 2.95
VEGFA-207ENST00000413642 DOK7Q18PE1 504 aa33.46■■■□□ 2.95
VEGFA-207ENST00000413642 SSH1Q8WYL5 1049 aa33.46■■■□□ 2.95
VEGFA-207ENST00000413642 CDC5LQ99459 802 aaKnown RBP33.46■■■□□ 2.95
VEGFA-207ENST00000413642 PODXL2Q9NZ53 605 aa33.46■■■□□ 2.95
VEGFA-207ENST00000413642 CLEC11AQ9Y240 323 aa33.46■■■□□ 2.95
VEGFA-207ENST00000413642 UFL1O94874 794 aa33.45■■■□□ 2.95
VEGFA-207ENST00000413642 CIAPIN1Q6FI81 312 aa33.45■■■□□ 2.95
VEGFA-207ENST00000413642 TRMT2AQ8IZ69 625 aaKnown RBP33.45■■■□□ 2.95
VEGFA-207ENST00000413642 BCL2L13Q9BXK5 485 aa33.45■■■□□ 2.95
VEGFA-207ENST00000413642 WTIPA6NIX2 430 aaPredicted RBP33.44■■■□□ 2.94
VEGFA-207ENST00000413642 LMOD1P29536 600 aaPredicted RBP33.44■■■□□ 2.94
VEGFA-207ENST00000413642 FAM161AQ3B820 660 aa33.44■■■□□ 2.94
VEGFA-207ENST00000413642 LTBP1Q14766 1721 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms