RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 PLA2G4DQ86XP0 818 aa10.53□□□□□ -0.72
SIK3-202ENST00000413553 MED1Q15648 1581 aaPredicted RBP10.53□□□□□ -0.72
SIK3-202ENST00000413553 ALS2Q96Q42 1657 aa10.53□□□□□ -0.72
SIK3-202ENST00000413553 CACNA1FO60840 1977 aa10.53□□□□□ -0.72
SIK3-202ENST00000413553 TATP17735 454 aaPredicted RBP10.53□□□□□ -0.72
SIK3-202ENST00000413553 CCDC144BQ3MJ40 725 aa10.53□□□□□ -0.72
SIK3-202ENST00000413553 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.53□□□□□ -0.72
SIK3-202ENST00000413553 CCDC144CPQ8IYA2 1237 aa10.53□□□□□ -0.72
SIK3-202ENST00000413553 KIF18AQ8NI77 898 aa10.53□□□□□ -0.72
SIK3-202ENST00000413553 DDX19AQ9NUU7 478 aaKnown RBP10.53□□□□□ -0.72
SIK3-202ENST00000413553 GOLGA6L19H0YKK7 550 aa10.52□□□□□ -0.72
SIK3-202ENST00000413553 KRT222Q8N1A0 295 aa10.52□□□□□ -0.72
SIK3-202ENST00000413553 IL17REQ8NFR9 667 aa10.52□□□□□ -0.72
SIK3-202ENST00000413553 TCEANC2Q96MN5 208 aa10.52□□□□□ -0.72
SIK3-202ENST00000413553 TPCN1Q9ULQ1 816 aa10.52□□□□□ -0.72
SIK3-202ENST00000413553 ELP1O95163 1332 aa10.52□□□□□ -0.73
SIK3-202ENST00000413553 PDCP20941 246 aa10.52□□□□□ -0.73
SIK3-202ENST00000413553 TDRD7Q8NHU6 1098 aaKnown RBP10.52□□□□□ -0.73
SIK3-202ENST00000413553 SCAND2PQ9GZW5 306 aaPredicted RBP10.52□□□□□ -0.73
SIK3-202ENST00000413553 ZSWIM6Q9HCJ5 1215 aa10.52□□□□□ -0.73
SIK3-202ENST00000413553 TOM1O60784 492 aa10.52□□□□□ -0.73
SIK3-202ENST00000413553 GLRX3O76003 335 aaKnown RBP10.52□□□□□ -0.73
SIK3-202ENST00000413553 SLFN14P0C7P3 912 aa10.52□□□□□ -0.73
SIK3-202ENST00000413553 STK3Q13188 491 aa10.52□□□□□ -0.73
SIK3-202ENST00000413553 TAF7Q15545 349 aaPredicted RBP10.52□□□□□ -0.73
SIK3-202ENST00000413553 AKAP4Q5JQC9 854 aa10.52□□□□□ -0.73
SIK3-202ENST00000413553 ZNF397Q8NF99 534 aaPredicted RBP10.52□□□□□ -0.73
SIK3-202ENST00000413553 ZNF215Q9UL58 517 aaPredicted RBP10.52□□□□□ -0.73
SIK3-202ENST00000413553 MORC2Q9Y6X9 1032 aaPredicted RBP10.52□□□□□ -0.73
SIK3-202ENST00000413553 ERICH4A6NGS2 130 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 ZBTB22O15209 634 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 NR1I2O75469 434 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 CDK11BP21127 795 aaKnown RBP10.51□□□□□ -0.73
SIK3-202ENST00000413553 PTPN14Q15678 1187 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 CLSTN2Q9H4D0 955 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 PHAXQ9H814 394 aaKnown RBP10.51□□□□□ -0.73
SIK3-202ENST00000413553 LGR6Q9HBX8 967 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 USP27XA6NNY8 438 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 HDGFL1Q5TGJ6 251 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 TRMT1Q9NXH9 659 aaKnown RBP10.51□□□□□ -0.73
SIK3-202ENST00000413553 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
SIK3-202ENST00000413553 CCDC66A2RUB6 948 aa10.5□□□□□ -0.73
SIK3-202ENST00000413553 NPHP1O15259 732 aa10.5□□□□□ -0.73
SIK3-202ENST00000413553 LEO1Q8WVC0 666 aaPredicted RBP10.5□□□□□ -0.73
SIK3-202ENST00000413553 TM6SF1Q9BZW5 370 aa10.5□□□□□ -0.73
SIK3-202ENST00000413553 RBM8AQ9Y5S9 174 aaKnown RBP10.5□□□□□ -0.73
SIK3-202ENST00000413553 N4BP2Q86UW6 1770 aaPredicted RBP10.5□□□□□ -0.73
SIK3-202ENST00000413553 NBPF7P0C2Y1 421 aaPredicted RBP10.5□□□□□ -0.73
SIK3-202ENST00000413553 TERF2Q15554 542 aa10.5□□□□□ -0.73
SIK3-202ENST00000413553 ELF2Q15723 593 aa10.5□□□□□ -0.73
SIK3-202ENST00000413553 KMT5BQ4FZB7 885 aa10.5□□□□□ -0.73
SIK3-202ENST00000413553 LARP1Q6PKG0 1096 aaKnown RBP10.5□□□□□ -0.73
SIK3-202ENST00000413553 FILIP1Q7Z7B0 1213 aa10.5□□□□□ -0.73
SIK3-202ENST00000413553 EIF2S2P20042 333 aaKnown RBP10.49□□□□□ -0.73
SIK3-202ENST00000413553 GTF2E1P29083 439 aaPredicted RBP10.49□□□□□ -0.73
SIK3-202ENST00000413553 POLA2Q14181 598 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 CREB3L3Q68CJ9 461 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 LRRC8AQ8IWT6 810 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 CLASRPQ8N2M8 674 aaKnown RBP10.49□□□□□ -0.73
SIK3-202ENST00000413553 RGPD2P0DJD1 1756 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 PXDNLA1KZ92 1463 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 SKILP12757 684 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 TTC41PQ6P2S7 1318 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 CPDO75976 1380 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 RGPD5Q99666 1765 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 BTBD11A6QL63 1104 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 BECN2A8MW95 431 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 UBAP1LF5GYI3 381 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 CEBPZQ03701 1054 aaKnown RBP10.49□□□□□ -0.73
SIK3-202ENST00000413553 HSP90AB4PQ58FF6 505 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 BLOC1S2Q6QNY1 142 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 GPATCH3Q96I76 525 aa10.49□□□□□ -0.73
SIK3-202ENST00000413553 IFIT2P09913 472 aaKnown RBP10.48□□□□□ -0.73
SIK3-202ENST00000413553 PSMA5P28066 241 aa10.48□□□□□ -0.73
SIK3-202ENST00000413553 COL9A3Q14050 684 aaPredicted RBP10.48□□□□□ -0.73
SIK3-202ENST00000413553 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
SIK3-202ENST00000413553 FBXO38Q6PIJ6 1188 aa10.48□□□□□ -0.73
SIK3-202ENST00000413553 PDIA4P13667 645 aaKnown RBP10.48□□□□□ -0.73
SIK3-202ENST00000413553 PGBD1Q96JS3 809 aa10.48□□□□□ -0.73
SIK3-202ENST00000413553 ECHDC1Q9NTX5 307 aa10.48□□□□□ -0.73
SIK3-202ENST00000413553 BTG4Q9NY30 223 aa10.48□□□□□ -0.73
SIK3-202ENST00000413553 USP16Q9Y5T5 823 aa10.48□□□□□ -0.73
SIK3-202ENST00000413553 CRYBG1Q9Y4K1 1723 aa10.48□□□□□ -0.73
SIK3-202ENST00000413553 CCDC69A6NI79 296 aa10.47□□□□□ -0.73
SIK3-202ENST00000413553 ADAMTS2O95450 1211 aa10.47□□□□□ -0.73
SIK3-202ENST00000413553 RBM43Q6ZSC3 357 aaKnown RBP10.47□□□□□ -0.73
SIK3-202ENST00000413553 C11orf57Q6ZUT1 292 aaPredicted RBP10.47□□□□□ -0.73
SIK3-202ENST00000413553 FAM227BQ96M60 508 aa10.47□□□□□ -0.73
SIK3-202ENST00000413553 ST7Q9NRC1 585 aa10.47□□□□□ -0.73
SIK3-202ENST00000413553 TMEM51Q9NW97 253 aa10.47□□□□□ -0.73
SIK3-202ENST00000413553 PHRF1Q9P1Y6 1649 aaKnown RBP10.47□□□□□ -0.73
SIK3-202ENST00000413553 NUTM2BA6NNL0 878 aaPredicted RBP10.47□□□□□ -0.73
SIK3-202ENST00000413553 NUTM2EB1AL46 878 aaPredicted RBP10.47□□□□□ -0.73
SIK3-202ENST00000413553 CDC25BP30305 580 aa10.47□□□□□ -0.73
SIK3-202ENST00000413553 NUTM2AQ8IVF1 878 aaPredicted RBP10.47□□□□□ -0.73
SIK3-202ENST00000413553 FBXW7Q969H0 707 aa10.47□□□□□ -0.73
SIK3-202ENST00000413553 ERO1AQ96HE7 468 aa10.47□□□□□ -0.73
SIK3-202ENST00000413553 WDR17Q8IZU2 1322 aa10.47□□□□□ -0.73
SIK3-202ENST00000413553 H3BQV1 296 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms