RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 GTF2E1P29083 439 aaPredicted RBP11.04□□□□□ -0.64
HERPUD2-203ENST00000413517 MNX1P50219 401 aaPredicted RBP11.04□□□□□ -0.64
HERPUD2-203ENST00000413517 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
HERPUD2-203ENST00000413517 COL4A5P29400 1685 aa11.04□□□□□ -0.64
HERPUD2-203ENST00000413517 SPEF2Q9C093 1822 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 KIF3CO14782 793 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 HCLS1P14317 486 aaPredicted RBP11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 TWISTNBQ3B726 338 aaPredicted RBP11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 SLC10A5Q5PT55 438 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 G2E3Q7L622 706 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 WDR63Q8IWG1 891 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 UTP14AQ9BVJ6 771 aaKnown RBP11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 NMRK2Q9NPI5 230 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 LTBP3Q9NS15 1303 aa11.03□□□□□ -0.64
HERPUD2-203ENST00000413517 LMNB1P20700 586 aa11.02□□□□□ -0.65
HERPUD2-203ENST00000413517 HOXA10P31260 410 aaPredicted RBP11.02□□□□□ -0.65
HERPUD2-203ENST00000413517 EXOSC9Q06265 439 aaKnown RBP11.02□□□□□ -0.65
HERPUD2-203ENST00000413517 HSP90AB3PQ58FF7 597 aa11.02□□□□□ -0.65
HERPUD2-203ENST00000413517 CCDC30Q5VVM6 783 aa11.02□□□□□ -0.65
HERPUD2-203ENST00000413517 E2F4Q16254 413 aa11.01□□□□□ -0.65
HERPUD2-203ENST00000413517 TRMT112Q9UI30 125 aaKnown RBP11.01□□□□□ -0.65
HERPUD2-203ENST00000413517 RNF123Q5XPI4 1314 aa11.01□□□□□ -0.65
HERPUD2-203ENST00000413517 LTBP1Q14766 1721 aa11.01□□□□□ -0.65
HERPUD2-203ENST00000413517 WDR90Q96KV7 1748 aa11.01□□□□□ -0.65
HERPUD2-203ENST00000413517 DUOX1Q9NRD9 1551 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 SEMA3EO15041 775 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 VAMP4O75379 141 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 ZMYND10O75800 440 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 C1QTNF8P60827 252 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 GOLGA2Q08379 1002 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
HERPUD2-203ENST00000413517 CCDC93Q567U6 631 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 RIC3Q7Z5B4 369 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
HERPUD2-203ENST00000413517 RPGRQ92834 1020 aaKnown RBP11□□□□□ -0.65
HERPUD2-203ENST00000413517 FAM89AQ96GI7 184 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 CRAMP1Q96RY5 1269 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 MYD88Q99836 296 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 TAOK3Q9H2K8 898 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 ABCC4O15439 1325 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 SH3TC1Q8TE82 1336 aa11□□□□□ -0.65
HERPUD2-203ENST00000413517 RTL5Q5HYW3 569 aaPredicted RBP10.99□□□□□ -0.65
HERPUD2-203ENST00000413517 JARID2Q92833 1246 aaPredicted RBP10.99□□□□□ -0.65
HERPUD2-203ENST00000413517 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
HERPUD2-203ENST00000413517 MAP3K2Q9Y2U5 619 aa10.99□□□□□ -0.65
HERPUD2-203ENST00000413517 CEP350Q5VT06 3117 aa10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 PI4KAP2A4QPH2 592 aa10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 CCER2I3L3R5 266 aa10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 IGKV5-2P06315 115 aa10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 ALDH1B1P30837 517 aa10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 PI4KAP1Q8N8J0 262 aa10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 METTL22Q9BUU2 404 aaPredicted RBP10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 ZNF277Q9NRM2 450 aaPredicted RBP10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
HERPUD2-203ENST00000413517 POTECB2RU33 542 aa10.97□□□□□ -0.65
HERPUD2-203ENST00000413517 PPEF1O14829 653 aaPredicted RBP10.97□□□□□ -0.65
HERPUD2-203ENST00000413517 FLIIQ13045 1269 aa10.97□□□□□ -0.65
HERPUD2-203ENST00000413517 SOGA3Q5TF21 947 aa10.97□□□□□ -0.65
HERPUD2-203ENST00000413517 KSR2Q6VAB6 950 aa10.97□□□□□ -0.65
HERPUD2-203ENST00000413517 RBM17Q96I25 401 aaKnown RBP10.97□□□□□ -0.65
HERPUD2-203ENST00000413517 STK31Q9BXU1 1019 aa10.97□□□□□ -0.65
HERPUD2-203ENST00000413517 ZMYND15Q9H091 742 aa10.97□□□□□ -0.65
HERPUD2-203ENST00000413517 SCN4AP35499 1836 aa10.97□□□□□ -0.65
HERPUD2-203ENST00000413517 A0A1B0GUL6 1792 aa10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 ZNF541Q9H0D2 1346 aa10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 GLTPD2A6NH11 291 aa10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 IRS4O14654 1257 aaPredicted RBP10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 SF3B3Q15393 1217 aaKnown RBP10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 CWF19L2Q2TBE0 894 aaKnown RBP10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 CCDC191Q8NCU4 936 aa10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 RRAGCQ9HB90 399 aa10.96□□□□□ -0.65
HERPUD2-203ENST00000413517 SCN9AQ15858 1988 aa10.96□□□□□ -0.66
HERPUD2-203ENST00000413517 KDM2BQ8NHM5 1336 aa10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 DDX58O95786 925 aaKnown RBP10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 PCCAP05165 728 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 GRAPQ13588 217 aa10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 RTKN2Q8IZC4 609 aa10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 ZBTB38Q8NAP3 1195 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 GRAPLQ8TC17 118 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 CELF1Q92879 486 aaKnown RBP10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 PSMD1Q99460 953 aa10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 MYH16Q9H6N6 1097 aa10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 CWC25Q9NXE8 425 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 ATP6V0A2Q9Y487 856 aa10.95□□□□□ -0.66
HERPUD2-203ENST00000413517 NEURL1BA8MQ27 555 aa10.94□□□□□ -0.66
HERPUD2-203ENST00000413517 F6X3S4 739 aa10.94□□□□□ -0.66
HERPUD2-203ENST00000413517 DDNO94850 711 aaPredicted RBP10.94□□□□□ -0.66
HERPUD2-203ENST00000413517 IARSP41252 1262 aaKnown RBP10.94□□□□□ -0.66
HERPUD2-203ENST00000413517 SLFN5Q08AF3 891 aa10.94□□□□□ -0.66
HERPUD2-203ENST00000413517 SEC31BQ9NQW1 1179 aa10.94□□□□□ -0.66
HERPUD2-203ENST00000413517 PSME4Q14997 1843 aa10.93□□□□□ -0.66
HERPUD2-203ENST00000413517 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms