RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 HOXA10P31260 410 aaPredicted RBP15.93■□□□□ 0.14
ZNF3-204ENST00000412947 PANK1Q8TE04 598 aa15.93■□□□□ 0.14
ZNF3-204ENST00000412947 HDAC5Q9UQL6 1122 aa15.93■□□□□ 0.14
ZNF3-204ENST00000412947 BCS1LQ9Y276 419 aa15.93■□□□□ 0.14
ZNF3-204ENST00000412947 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
ZNF3-204ENST00000412947 GPR162Q16538 588 aa15.92■□□□□ 0.14
ZNF3-204ENST00000412947 SUCLG2Q96I99 432 aa15.92■□□□□ 0.14
ZNF3-204ENST00000412947 CRAMP1Q96RY5 1269 aa15.92■□□□□ 0.14
ZNF3-204ENST00000412947 DLEC1Q9Y238 1755 aa15.92■□□□□ 0.14
ZNF3-204ENST00000412947 GNAI3P08754 354 aa15.91■□□□□ 0.14
ZNF3-204ENST00000412947 PDE3AQ14432 1141 aa15.91■□□□□ 0.14
ZNF3-204ENST00000412947 PRPF40BQ6NWY9 871 aaKnown RBP15.91■□□□□ 0.14
ZNF3-204ENST00000412947 TTLL11Q8NHH1 800 aa15.91■□□□□ 0.14
ZNF3-204ENST00000412947 CCDC85AQ96PX6 553 aaPredicted RBP15.91■□□□□ 0.14
ZNF3-204ENST00000412947 MEIS3Q99687 375 aa15.91■□□□□ 0.14
ZNF3-204ENST00000412947 FOXO4P98177 505 aa15.9■□□□□ 0.14
ZNF3-204ENST00000412947 GRAPQ13588 217 aa15.9■□□□□ 0.14
ZNF3-204ENST00000412947 GRAPLQ8TC17 118 aaPredicted RBP15.9■□□□□ 0.14
ZNF3-204ENST00000412947 CHMP3Q9Y3E7 222 aa15.9■□□□□ 0.14
ZNF3-204ENST00000412947 CSF1RP07333 972 aa15.89■□□□□ 0.13
ZNF3-204ENST00000412947 MVPQ14764 893 aaKnown RBP15.89■□□□□ 0.13
ZNF3-204ENST00000412947 EPHA10Q5JZY3 1008 aa15.89■□□□□ 0.13
ZNF3-204ENST00000412947 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
ZNF3-204ENST00000412947 CDC5LQ99459 802 aaKnown RBP15.89■□□□□ 0.13
ZNF3-204ENST00000412947 BICC1Q9H694 974 aaKnown RBP15.89■□□□□ 0.13
ZNF3-204ENST00000412947 GREM2Q9H772 168 aa15.89■□□□□ 0.13
ZNF3-204ENST00000412947 COG6Q9Y2V7 657 aa15.89■□□□□ 0.13
ZNF3-204ENST00000412947 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
ZNF3-204ENST00000412947 PPEF1O14829 653 aaPredicted RBP15.88■□□□□ 0.13
ZNF3-204ENST00000412947 BBOX1O75936 387 aa15.88■□□□□ 0.13
ZNF3-204ENST00000412947 YBX3P16989 372 aaKnown RBP eCLIP15.88■□□□□ 0.13
ZNF3-204ENST00000412947 FAM161AQ3B820 660 aa15.88■□□□□ 0.13
ZNF3-204ENST00000412947 TMX4Q9H1E5 349 aaPredicted RBP15.88■□□□□ 0.13
ZNF3-204ENST00000412947 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
ZNF3-204ENST00000412947 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
ZNF3-204ENST00000412947 LRRFIP2Q9Y608 721 aaKnown RBP15.88■□□□□ 0.13
ZNF3-204ENST00000412947 BRCA1P38398 1863 aaKnown RBP15.88■□□□□ 0.13
ZNF3-204ENST00000412947 GRIN3BO60391 1043 aa15.87■□□□□ 0.13
ZNF3-204ENST00000412947 GNAI2P04899 355 aa15.87■□□□□ 0.13
ZNF3-204ENST00000412947 C20orf194Q5TEA3 1177 aa15.87■□□□□ 0.13
ZNF3-204ENST00000412947 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
ZNF3-204ENST00000412947 KAZALD1Q96I82 304 aa15.87■□□□□ 0.13
ZNF3-204ENST00000412947 SEC31BQ9NQW1 1179 aa15.87■□□□□ 0.13
ZNF3-204ENST00000412947 DDX19BQ9UMR2 479 aa15.87■□□□□ 0.13
ZNF3-204ENST00000412947 MYH3P11055 1940 aa15.86■□□□□ 0.13
ZNF3-204ENST00000412947 ANKRD18BA2A2Z9 1011 aa15.86■□□□□ 0.13
ZNF3-204ENST00000412947 C21orf2O43822 256 aa15.86■□□□□ 0.13
ZNF3-204ENST00000412947 ITGA6P23229 1130 aa15.86■□□□□ 0.13
ZNF3-204ENST00000412947 RPS8P62241 208 aaKnown RBP15.86■□□□□ 0.13
ZNF3-204ENST00000412947 IFIT5Q13325 482 aaKnown RBP15.86■□□□□ 0.13
ZNF3-204ENST00000412947 CCDC57Q2TAC2 916 aa15.86■□□□□ 0.13
ZNF3-204ENST00000412947 RABL6Q3YEC7 729 aaPredicted RBP15.86■□□□□ 0.13
ZNF3-204ENST00000412947 TAF7LQ5H9L4 462 aa15.86■□□□□ 0.13
ZNF3-204ENST00000412947 TMC4Q7Z404 712 aa15.86■□□□□ 0.13
ZNF3-204ENST00000412947 ANKRD18AQ8IVF6 992 aa15.86■□□□□ 0.13
ZNF3-204ENST00000412947 ANKRD44Q8N8A2 993 aa15.86■□□□□ 0.13
ZNF3-204ENST00000412947 CELF1Q92879 486 aaKnown RBP15.86■□□□□ 0.13
ZNF3-204ENST00000412947 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
ZNF3-204ENST00000412947 ZBTB7BO15156 539 aaPredicted RBP15.85■□□□□ 0.13
ZNF3-204ENST00000412947 IGHMBP2P38935 993 aaKnown RBP15.85■□□□□ 0.13
ZNF3-204ENST00000412947 CCDC93Q567U6 631 aa15.85■□□□□ 0.13
ZNF3-204ENST00000412947 ATP6V0A2Q9Y487 856 aa15.85■□□□□ 0.13
ZNF3-204ENST00000412947 CC2D2BQ6DHV5 1058 aa15.84■□□□□ 0.13
ZNF3-204ENST00000412947 ARHGAP27Q6ZUM4 889 aa15.84■□□□□ 0.13
ZNF3-204ENST00000412947 SLX4Q8IY92 1834 aa15.84■□□□□ 0.13
ZNF3-204ENST00000412947 CACNA1SQ13698 1873 aa15.84■□□□□ 0.13
ZNF3-204ENST00000412947 ARFGEF1Q9Y6D6 1849 aa15.83■□□□□ 0.12
ZNF3-204ENST00000412947 CENPBP07199 599 aaPredicted RBP15.83■□□□□ 0.12
ZNF3-204ENST00000412947 SP8Q8IXZ3 490 aa15.83■□□□□ 0.12
ZNF3-204ENST00000412947 C7orf43Q8WVR3 580 aa15.83■□□□□ 0.12
ZNF3-204ENST00000412947 MPHOSPH8Q99549 860 aa15.83■□□□□ 0.12
ZNF3-204ENST00000412947 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
ZNF3-204ENST00000412947 RTKN2Q8IZC4 609 aa15.82■□□□□ 0.12
ZNF3-204ENST00000412947 C1orf115Q9H7X2 142 aa15.82■□□□□ 0.12
ZNF3-204ENST00000412947 OLFM4Q6UX06 510 aa15.81■□□□□ 0.12
ZNF3-204ENST00000412947 BSDC1Q9NW68 430 aaPredicted RBP15.81■□□□□ 0.12
ZNF3-204ENST00000412947 SRGAP3O43295 1099 aa15.8■□□□□ 0.12
ZNF3-204ENST00000412947 ZNF594Q96JF6 807 aaPredicted RBP15.8■□□□□ 0.12
ZNF3-204ENST00000412947 ZBTB40Q9NUA8 1239 aa15.8■□□□□ 0.12
ZNF3-204ENST00000412947 TAF1P21675 1872 aa15.8■□□□□ 0.12
ZNF3-204ENST00000412947 COL4A1P02462 1669 aa15.79■□□□□ 0.12
ZNF3-204ENST00000412947 MTX1Q13505 466 aa15.79■□□□□ 0.12
ZNF3-204ENST00000412947 DPP8Q6V1X1 898 aaPredicted RBP15.79■□□□□ 0.12
ZNF3-204ENST00000412947 LDHAL6AQ6ZMR3 332 aa15.79■□□□□ 0.12
ZNF3-204ENST00000412947 MPNDQ8N594 471 aa15.79■□□□□ 0.12
ZNF3-204ENST00000412947 CRBNQ96SW2 442 aa15.79■□□□□ 0.12
ZNF3-204ENST00000412947 TAOK3Q9H2K8 898 aa15.79■□□□□ 0.12
ZNF3-204ENST00000412947 CNNM1Q9NRU3 951 aa15.79■□□□□ 0.12
ZNF3-204ENST00000412947 FKBP4Q02790 459 aaKnown RBP eCLIP15.78■□□□□ 0.12
ZNF3-204ENST00000412947 RASSF7Q02833 373 aa15.78■□□□□ 0.12
ZNF3-204ENST00000412947 SLC51AQ86UW1 340 aa15.78■□□□□ 0.12
ZNF3-204ENST00000412947 SUPT20HQ8NEM7 779 aa15.78■□□□□ 0.12
ZNF3-204ENST00000412947 ANKIB1Q9P2G1 1089 aa15.78■□□□□ 0.12
ZNF3-204ENST00000412947 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
ZNF3-204ENST00000412947 LTBP3Q9NS15 1303 aa15.77■□□□□ 0.12
ZNF3-204ENST00000412947 NFKBIEO00221 500 aa15.77■□□□□ 0.12
ZNF3-204ENST00000412947 RFX5P48382 616 aaPredicted RBP15.77■□□□□ 0.12
ZNF3-204ENST00000412947 GPSM2P81274 684 aa15.77■□□□□ 0.12
ZNF3-204ENST00000412947 ATP8B2P98198 1209 aa15.77■□□□□ 0.12
ZNF3-204ENST00000412947 ANKRD2Q9GZV1 360 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms