RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 GLTPD2A6NH11 291 aa24.06■■□□□ 1.44
TRIM56-202ENST00000412507 NEURL1BA8MQ27 555 aa24.06■■□□□ 1.44
TRIM56-202ENST00000412507 BBOX1O75936 387 aa24.06■■□□□ 1.44
TRIM56-202ENST00000412507 PSMD1Q99460 953 aa24.06■■□□□ 1.44
TRIM56-202ENST00000412507 WDR90Q96KV7 1748 aa24.05■■□□□ 1.44
TRIM56-202ENST00000412507 TMX4Q9H1E5 349 aaPredicted RBP24.05■■□□□ 1.44
TRIM56-202ENST00000412507 RRAGCQ9HB90 399 aa24.05■■□□□ 1.44
TRIM56-202ENST00000412507 PDE8AO60658 829 aa24.04■■□□□ 1.44
TRIM56-202ENST00000412507 HSP90B1P14625 803 aaKnown RBP24.04■■□□□ 1.44
TRIM56-202ENST00000412507 IARSP41252 1262 aaKnown RBP24.04■■□□□ 1.44
TRIM56-202ENST00000412507 GRIPAP1Q4V328 841 aa24.04■■□□□ 1.44
TRIM56-202ENST00000412507 SP8Q8IXZ3 490 aa24.04■■□□□ 1.44
TRIM56-202ENST00000412507 CDHR2Q9BYE9 1310 aa24.04■■□□□ 1.44
TRIM56-202ENST00000412507 F6X3S4 739 aa24.03■■□□□ 1.44
TRIM56-202ENST00000412507 CELF1Q92879 486 aaKnown RBP24.03■■□□□ 1.44
TRIM56-202ENST00000412507 COL4A5P29400 1685 aa24.02■■□□□ 1.44
TRIM56-202ENST00000412507 DPY19L2Q6NUT2 758 aa24.02■■□□□ 1.44
TRIM56-202ENST00000412507 TRMT2AQ8IZ69 625 aaKnown RBP24.02■■□□□ 1.44
TRIM56-202ENST00000412507 LINS1Q8NG48 757 aa24.01■■□□□ 1.43
TRIM56-202ENST00000412507 CCDC85AQ96PX6 553 aaPredicted RBP24.01■■□□□ 1.43
TRIM56-202ENST00000412507 H7C1W4 665 aa24■■□□□ 1.43
TRIM56-202ENST00000412507 GCKRQ14397 625 aa24■■□□□ 1.43
TRIM56-202ENST00000412507 UBE3BQ7Z3V4 1068 aa24■■□□□ 1.43
TRIM56-202ENST00000412507 SEC31BQ9NQW1 1179 aa24■■□□□ 1.43
TRIM56-202ENST00000412507 SCN4AP35499 1836 aa24■■□□□ 1.43
TRIM56-202ENST00000412507 CCDC152Q4G0S7 254 aa23.99■■□□□ 1.43
TRIM56-202ENST00000412507 TMC4Q7Z404 712 aa23.99■■□□□ 1.43
TRIM56-202ENST00000412507 MPNDQ8N594 471 aa23.99■■□□□ 1.43
TRIM56-202ENST00000412507 MRPL50Q8N5N7 158 aaKnown RBP23.99■■□□□ 1.43
TRIM56-202ENST00000412507 LTBP1Q14766 1721 aa23.98■■□□□ 1.43
TRIM56-202ENST00000412507 DDNO94850 711 aaPredicted RBP23.98■■□□□ 1.43
TRIM56-202ENST00000412507 DPP8Q6V1X1 898 aaPredicted RBP23.98■■□□□ 1.43
TRIM56-202ENST00000412507 DUOX1Q9NRD9 1551 aa23.98■■□□□ 1.43
TRIM56-202ENST00000412507 RPS8P62241 208 aaKnown RBP23.97■■□□□ 1.43
TRIM56-202ENST00000412507 BEND3Q5T5X7 828 aa23.97■■□□□ 1.43
TRIM56-202ENST00000412507 C16orf71Q8IYS4 520 aaPredicted RBP23.97■■□□□ 1.43
TRIM56-202ENST00000412507 LARGE2Q8N3Y3 721 aa23.97■■□□□ 1.43
TRIM56-202ENST00000412507 JDP2Q8WYK2 163 aa23.97■■□□□ 1.43
TRIM56-202ENST00000412507 SSH1Q8WYL5 1049 aa23.97■■□□□ 1.43
TRIM56-202ENST00000412507 ZNF541Q9H0D2 1346 aa23.97■■□□□ 1.43
TRIM56-202ENST00000412507 POTECB2RU33 542 aa23.96■■□□□ 1.43
TRIM56-202ENST00000412507 TOMM70O94826 608 aa23.96■■□□□ 1.43
TRIM56-202ENST00000412507 CTSWP56202 376 aa23.96■■□□□ 1.43
TRIM56-202ENST00000412507 RTFDC1Q9BY42 306 aaPredicted RBP23.96■■□□□ 1.43
TRIM56-202ENST00000412507 FZD9O00144 591 aa23.95■■□□□ 1.42
TRIM56-202ENST00000412507 PPIP5K2O43314 1243 aa23.95■■□□□ 1.42
TRIM56-202ENST00000412507 VEGFAP15692 232 aaPredicted RBP23.95■■□□□ 1.42
TRIM56-202ENST00000412507 CASP7P55210 303 aa23.95■■□□□ 1.42
TRIM56-202ENST00000412507 SUPT20HQ8NEM7 779 aa23.95■■□□□ 1.42
TRIM56-202ENST00000412507 TTLL11Q8NHH1 800 aa23.95■■□□□ 1.42
TRIM56-202ENST00000412507 BCL2L13Q9BXK5 485 aa23.95■■□□□ 1.42
TRIM56-202ENST00000412507 AOC3Q16853 763 aa23.94■■□□□ 1.42
TRIM56-202ENST00000412507 SLC4A10Q6U841 1118 aa23.94■■□□□ 1.42
TRIM56-202ENST00000412507 HNRNPUQ00839 825 aaKnown RBP eCLIP23.93■■□□□ 1.42
TRIM56-202ENST00000412507 NSFL1CQ9UNZ2 370 aaKnown RBP23.93■■□□□ 1.42
TRIM56-202ENST00000412507 GPSM2P81274 684 aa23.92■■□□□ 1.42
TRIM56-202ENST00000412507 ALDH1L2Q3SY69 923 aa23.92■■□□□ 1.42
TRIM56-202ENST00000412507 NIM1KQ8IY84 436 aa23.92■■□□□ 1.42
TRIM56-202ENST00000412507 PLA2G12BQ9BX93 195 aa23.92■■□□□ 1.42
TRIM56-202ENST00000412507 VPS33BQ9H267 617 aa23.92■■□□□ 1.42
TRIM56-202ENST00000412507 GREM2Q9H772 168 aa23.92■■□□□ 1.42
TRIM56-202ENST00000412507 EIF6P56537 245 aaKnown RBP23.91■■□□□ 1.42
TRIM56-202ENST00000412507 ANKRD18AQ8IVF6 992 aa23.91■■□□□ 1.42
TRIM56-202ENST00000412507 RBM46Q8TBY0 533 aaKnown RBP23.91■■□□□ 1.42
TRIM56-202ENST00000412507 SRCIN1Q9C0H9 1055 aa23.91■■□□□ 1.42
TRIM56-202ENST00000412507 SMC4Q9NTJ3 1288 aa23.9■■□□□ 1.42
TRIM56-202ENST00000412507 RTL9Q8NET4 1388 aa23.9■■□□□ 1.42
TRIM56-202ENST00000412507 PTPRCP08575 1304 aa23.89■■□□□ 1.42
TRIM56-202ENST00000412507 ALDH1L1O75891 902 aa23.89■■□□□ 1.41
TRIM56-202ENST00000412507 CT47B1P0C2W7 299 aaPredicted RBP23.89■■□□□ 1.41
TRIM56-202ENST00000412507 KIAA2012Q0VF49 1180 aa23.89■■□□□ 1.41
TRIM56-202ENST00000412507 CDC5LQ99459 802 aaKnown RBP23.89■■□□□ 1.41
TRIM56-202ENST00000412507 A0A1B0GUL6 1792 aa23.88■■□□□ 1.41
TRIM56-202ENST00000412507 C6orf229H3BNL8 230 aa23.88■■□□□ 1.41
TRIM56-202ENST00000412507 L3MBTL3Q96JM7 780 aaPredicted RBP23.88■■□□□ 1.41
TRIM56-202ENST00000412507 C9orf78Q9NZ63 289 aaPredicted RBP23.88■■□□□ 1.41
TRIM56-202ENST00000412507 POLLQ9UGP5 575 aa23.88■■□□□ 1.41
TRIM56-202ENST00000412507 GJA3Q9Y6H8 435 aa23.88■■□□□ 1.41
TRIM56-202ENST00000412507 GRM8O00222 908 aa23.87■■□□□ 1.41
TRIM56-202ENST00000412507 CSF1RP07333 972 aa23.87■■□□□ 1.41
TRIM56-202ENST00000412507 GPC2Q8N158 579 aa23.87■■□□□ 1.41
TRIM56-202ENST00000412507 SCN9AQ15858 1988 aa23.86■■□□□ 1.41
TRIM56-202ENST00000412507 WASHC4Q2M389 1173 aa23.86■■□□□ 1.41
TRIM56-202ENST00000412507 FAM161AQ3B820 660 aa23.86■■□□□ 1.41
TRIM56-202ENST00000412507 TBC1D16Q8TBP0 767 aa23.86■■□□□ 1.41
TRIM56-202ENST00000412507 ANKIB1Q9P2G1 1089 aa23.86■■□□□ 1.41
TRIM56-202ENST00000412507 ZNRF3Q9ULT6 936 aa23.86■■□□□ 1.41
TRIM56-202ENST00000412507 IQCA1LA6NCM1 817 aa23.85■■□□□ 1.41
TRIM56-202ENST00000412507 RIMBP2O15034 1052 aa23.85■■□□□ 1.41
TRIM56-202ENST00000412507 ITGA6P23229 1130 aa23.85■■□□□ 1.41
TRIM56-202ENST00000412507 FOXO4P98177 505 aa23.85■■□□□ 1.41
TRIM56-202ENST00000412507 GPR101Q96P66 508 aaPredicted RBP23.85■■□□□ 1.41
TRIM56-202ENST00000412507 PODXL2Q9NZ53 605 aa23.85■■□□□ 1.41
TRIM56-202ENST00000412507 PSME4Q14997 1843 aa23.84■■□□□ 1.41
TRIM56-202ENST00000412507 HSPA6P17066 643 aa23.84■■□□□ 1.41
TRIM56-202ENST00000412507 EPHA10Q5JZY3 1008 aa23.84■■□□□ 1.41
TRIM56-202ENST00000412507 BSDC1Q9NW68 430 aaPredicted RBP23.84■■□□□ 1.41
TRIM56-202ENST00000412507 UFL1O94874 794 aa23.83■■□□□ 1.41
TRIM56-202ENST00000412507 FSTL1Q12841 308 aa23.83■■□□□ 1.41
TRIM56-202ENST00000412507 SMC1BQ8NDV3 1235 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms