RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 CNPY2Q9Y2B0 182 aa13.94□□□□□ -0.18
ABCA13-201ENST00000411975 CCDC171Q6TFL3 1326 aa13.94□□□□□ -0.18
ABCA13-201ENST00000411975 PRR36Q9H6K5 1346 aa13.94□□□□□ -0.18
ABCA13-201ENST00000411975 KLF18A0A0U1RQI7 1052 aa13.94□□□□□ -0.18
ABCA13-201ENST00000411975 F13A1P00488 732 aa13.94□□□□□ -0.18
ABCA13-201ENST00000411975 TTLL5Q6EMB2 1281 aa13.94□□□□□ -0.18
ABCA13-201ENST00000411975 CCAR1Q8IX12 1150 aaKnown RBP13.94□□□□□ -0.18
ABCA13-201ENST00000411975 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
ABCA13-201ENST00000411975 SSRP1Q08945 709 aaKnown RBP13.94□□□□□ -0.18
ABCA13-201ENST00000411975 USP48Q86UV5 1035 aa13.94□□□□□ -0.18
ABCA13-201ENST00000411975 POLR3DP05423 398 aaPredicted RBP13.93□□□□□ -0.18
ABCA13-201ENST00000411975 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
ABCA13-201ENST00000411975 METAP2P50579 478 aaKnown RBP eCLIP13.93□□□□□ -0.18
ABCA13-201ENST00000411975 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
ABCA13-201ENST00000411975 KLHL34Q8N239 644 aa13.93□□□□□ -0.18
ABCA13-201ENST00000411975 PLBD2Q8NHP8 589 aa13.93□□□□□ -0.18
ABCA13-201ENST00000411975 CFAP100Q494V2 611 aa13.93□□□□□ -0.18
ABCA13-201ENST00000411975 MFSD6Q6ZSS7 791 aa13.93□□□□□ -0.18
ABCA13-201ENST00000411975 Q6ZUG5 572 aa13.93□□□□□ -0.18
ABCA13-201ENST00000411975 RNF17Q9BXT8 1623 aaKnown RBP13.93□□□□□ -0.18
ABCA13-201ENST00000411975 HCLS1P14317 486 aaPredicted RBP13.93□□□□□ -0.18
ABCA13-201ENST00000411975 DDB1Q16531 1140 aa13.93□□□□□ -0.18
ABCA13-201ENST00000411975 USP44Q9H0E7 712 aa13.93□□□□□ -0.18
ABCA13-201ENST00000411975 SPHKAPQ2M3C7 1700 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 KRT18P05783 430 aaKnown RBP13.92□□□□□ -0.18
ABCA13-201ENST00000411975 RBM5P52756 815 aaKnown RBP eCLIP13.92□□□□□ -0.18
ABCA13-201ENST00000411975 SLC9C2Q5TAH2 1124 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 USP6P35125 1406 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 ZSCAN29Q8IWY8 852 aaPredicted RBP13.92□□□□□ -0.18
ABCA13-201ENST00000411975 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
ABCA13-201ENST00000411975 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 ZNF165P49910 485 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 CCDC144CPQ8IYA2 1237 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 SGSM2O43147 1006 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 GIMAP6Q6P9H5 292 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 CATIPQ7Z7H3 387 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 DZIP3Q86Y13 1208 aaKnown RBP13.92□□□□□ -0.18
ABCA13-201ENST00000411975 PANK2Q9BZ23 570 aa13.92□□□□□ -0.18
ABCA13-201ENST00000411975 NLRP1Q9C000 1473 aa13.91□□□□□ -0.18
ABCA13-201ENST00000411975 DNM1Q05193 864 aaKnown RBP13.91□□□□□ -0.18
ABCA13-201ENST00000411975 ACSBG1Q96GR2 724 aa13.91□□□□□ -0.18
ABCA13-201ENST00000411975 RBM10P98175 930 aaKnown RBP13.91□□□□□ -0.18
ABCA13-201ENST00000411975 KLHDC4Q8TBB5 520 aa13.91□□□□□ -0.18
ABCA13-201ENST00000411975 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
ABCA13-201ENST00000411975 UQCRHLA0A096LP55 91 aa13.91□□□□□ -0.18
ABCA13-201ENST00000411975 RNF113AO15541 343 aaKnown RBP13.91□□□□□ -0.18
ABCA13-201ENST00000411975 UQCRHP07919 91 aa13.91□□□□□ -0.18
ABCA13-201ENST00000411975 UVSSAQ2YD98 709 aa13.91□□□□□ -0.18
ABCA13-201ENST00000411975 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
ABCA13-201ENST00000411975 ZNHIT6Q9NWK9 470 aaKnown RBP13.91□□□□□ -0.18
ABCA13-201ENST00000411975 SFPQP23246 707 aaKnown RBP eCLIP13.9□□□□□ -0.18
ABCA13-201ENST00000411975 SUCLG2Q96I99 432 aa13.9□□□□□ -0.18
ABCA13-201ENST00000411975 GIGYF1O75420 1035 aaPredicted RBP13.9□□□□□ -0.18
ABCA13-201ENST00000411975 ADCY5O95622 1261 aa13.9□□□□□ -0.18
ABCA13-201ENST00000411975 CAVIN2O95810 425 aa13.9□□□□□ -0.18
ABCA13-201ENST00000411975 GSPT1P15170 499 aaKnown RBP13.9□□□□□ -0.18
ABCA13-201ENST00000411975 ZNF771Q7L3S4 317 aaPredicted RBP13.9□□□□□ -0.18
ABCA13-201ENST00000411975 SMARCC1Q92922 1105 aaPredicted RBP13.9□□□□□ -0.18
ABCA13-201ENST00000411975 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.183e-8■■■□□ 18.6
ABCA13-201ENST00000411975 IRS4O14654 1257 aaPredicted RBP13.9□□□□□ -0.18
ABCA13-201ENST00000411975 ZNF853P0CG23 659 aa13.9□□□□□ -0.18
ABCA13-201ENST00000411975 GCKRQ14397 625 aa13.9□□□□□ -0.18
ABCA13-201ENST00000411975 ZNF444Q8N0Y2 327 aaPredicted RBP13.9□□□□□ -0.18
ABCA13-201ENST00000411975 SSH3Q8TE77 659 aa13.9□□□□□ -0.18
ABCA13-201ENST00000411975 RPGRQ92834 1020 aaKnown RBP13.9□□□□□ -0.18
ABCA13-201ENST00000411975 EYA2O00167 538 aa13.9□□□□□ -0.19
ABCA13-201ENST00000411975 KCNQ3O43525 872 aa13.9□□□□□ -0.19
ABCA13-201ENST00000411975 CPA1P15085 419 aa13.9□□□□□ -0.19
ABCA13-201ENST00000411975 TEX35Q5T0J7 233 aa13.9□□□□□ -0.19
ABCA13-201ENST00000411975 ANKRD18AQ8IVF6 992 aa13.9□□□□□ -0.19
ABCA13-201ENST00000411975 TSPOAP1O95153 1857 aa13.9□□□□□ -0.19
ABCA13-201ENST00000411975 ZBTB43O43298 467 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 TNNI3KQ59H18 835 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 FPGT-TNNI3KV9GXZ4 949 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 MADDQ8WXG6 1647 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 TIMM10P62072 90 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 STX1AQ16623 288 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
ABCA13-201ENST00000411975 CNNM3Q8NE01 707 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 CDK12Q9NYV4 1490 aaPredicted RBP13.89□□□□□ -0.19
ABCA13-201ENST00000411975 SYT1P21579 422 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 CCDC191Q8NCU4 936 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 DBNDD2Q9BQY9 259 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 SLC26A6Q9BXS9 759 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 CLIP2Q9UDT6 1046 aa13.89□□□□□ -0.19
ABCA13-201ENST00000411975 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
ABCA13-201ENST00000411975 UTP14AQ9BVJ6 771 aaKnown RBP13.88□□□□□ -0.19
ABCA13-201ENST00000411975 BTG4Q9NY30 223 aa13.88□□□□□ -0.19
ABCA13-201ENST00000411975 IQSEC3Q9UPP2 1182 aaPredicted RBP13.88□□□□□ -0.19
ABCA13-201ENST00000411975 DDX17Q92841 729 aaKnown RBP13.88□□□□□ -0.19
ABCA13-201ENST00000411975 PRC1O43663 620 aa13.88□□□□□ -0.19
ABCA13-201ENST00000411975 CAGE1Q8TC20 777 aa13.88□□□□□ -0.19
ABCA13-201ENST00000411975 FAM89AQ96GI7 184 aa13.88□□□□□ -0.19
ABCA13-201ENST00000411975 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
ABCA13-201ENST00000411975 SEC63Q9UGP8 760 aaKnown RBP13.88□□□□□ -0.19
ABCA13-201ENST00000411975 A1BGP04217 495 aa13.88□□□□□ -0.19
ABCA13-201ENST00000411975 SSBP05455 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
ABCA13-201ENST00000411975 LDHCP07864 332 aa13.88□□□□□ -0.19
ABCA13-201ENST00000411975 CYP7A1P22680 504 aa13.88□□□□□ -0.19
ABCA13-201ENST00000411975 PRIM1P49642 420 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms