RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 RTN1Q16799 776 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 TXNRD3Q86VQ6 643 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 PROSER2Q86WR7 435 aaPredicted RBP3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 ANKMY2Q8IV38 441 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 WWC1Q8IX03 1113 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 WFDC12Q8WWY7 111 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 MEGF10Q96KG7 1140 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 PRIMPOLQ96LW4 560 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 NACC1Q96RE7 527 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 SAP130Q9H0E3 1048 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L15C9J2P7 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L10C9JJH3 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L13C9JLJ4 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L12C9JPN9 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L11C9JVI0 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L21D6R901 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L18D6R9N7 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L22D6RA61 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L17D6RBQ6 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L19D6RCP7 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L20D6RJB6 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 IGFBP4P22692 258 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 WEE1P30291 646 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP17L24Q0WX57 530 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 NEUROD1Q13562 356 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 MSL1Q68DK7 614 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 LARP1Q6PKG0 1096 aaKnown RBP3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 DHX32Q7L7V1 743 aaKnown RBP3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 KRTAP19-1Q8IUB9 90 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 USP21Q9UK80 565 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 ZNF777Q9ULD5 760 aaPredicted RBP3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 CHMP3Q9Y3E7 222 aa3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 RTCBQ9Y3I0 505 aaKnown RBP3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.69□□□□□ -1.82
RNU2-55P-201ENST00000411146 RFX1P22670 979 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 COX20Q5RI15 118 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 CFAP70Q5T0N1 1121 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 IER5Q5VY09 327 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 FBXO11Q86XK2 927 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 CMTR1Q8N1G2 835 aaKnown RBP3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 TRPM4Q8TD43 1214 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 CALR3Q96L12 384 aaKnown RBP3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 PNMA5Q96PV4 448 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 SMG9Q9H0W8 520 aaKnown RBP3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 VRTNQ9H8Y1 702 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 KCNMB2Q9Y691 235 aa3.68□□□□□ -1.82
RNU2-55P-201ENST00000411146 MMP20O60882 483 aa3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 MAP3K6O95382 1288 aa3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 RARAP10276 462 aa3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 RAC1P63000 192 aa3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 FKBP5Q13451 457 aaPredicted RBP3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 LRP8Q14114 963 aa3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 COL13A1Q5TAT6 717 aaPredicted RBP3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 ELMSAN1Q6PJG2 1045 aa3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 ETFBKMTQ8IXQ9 262 aa3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 RGL4Q8IZJ4 473 aa3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 RBM19Q9Y4C8 960 aaKnown RBP3.67□□□□□ -1.82
RNU2-55P-201ENST00000411146 FAM196BA6NMK8 535 aa3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 DLL1O00548 723 aa3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 MED26O95402 600 aa3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 TRIP4Q15650 581 aaPredicted RBP3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 C11orf91Q3C1V1 193 aa3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 GDF6Q6KF10 455 aaPredicted RBP3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 TREML1Q86YW5 311 aa3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 AGGF1Q8N302 714 aaeCLIP3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 NSUN5Q96P11 429 aaKnown RBP3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 KCNK4Q9NYG8 393 aa3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 TLR7Q9NYK1 1049 aaKnown RBP3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 SLAIN2Q9P270 581 aa3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 TRIM33Q9UPN9 1127 aa3.66□□□□□ -1.82
RNU2-55P-201ENST00000411146 LOC102724428A0A0B4J2F2 783 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 TM4SF5O14894 197 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 ZBTB39O15060 712 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 PRMT3O60678 531 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 XYLBO75191 536 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 EIF2AK2P19525 551 aaKnown RBP3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 ARSDP51689 593 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 SIK1P57059 783 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 GPLD1P80108 840 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 FAM69CQ0P6D2 419 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 NAA30Q147X3 362 aaPredicted RBP3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 SETDB1Q15047 1291 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 TXNDC11Q6PKC3 985 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 NBPF11Q86T75 865 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 WFDC8Q8IUA0 241 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 IL22RA1Q8N6P7 574 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 GALNT11Q8NCW6 608 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 PLD4Q96BZ4 506 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 MYO19Q96H55 970 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 ZMIZ1Q9ULJ6 1067 aa3.65□□□□□ -1.83
RNU2-55P-201ENST00000411146 TNFRSF10BO14763 440 aa3.64□□□□□ -1.83
RNU2-55P-201ENST00000411146 ADAMTS4O75173 837 aa3.64□□□□□ -1.83
RNU2-55P-201ENST00000411146 WISP1O95388 367 aa3.64□□□□□ -1.83
RNU2-55P-201ENST00000411146 CYP2E1P05181 493 aaPredicted RBP3.64□□□□□ -1.83
RNU2-55P-201ENST00000411146 CDC25BP30305 580 aa3.64□□□□□ -1.83
RNU2-55P-201ENST00000411146 SCNN1AP37088 669 aa3.64□□□□□ -1.83
RNU2-55P-201ENST00000411146 OCLNQ16625 522 aa3.64□□□□□ -1.83
RNU2-55P-201ENST00000411146 UBL7Q96S82 380 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms