RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 JARID2Q92833 1246 aaPredicted RBP22.74■■□□□ 1.23
LSM5-204ENST00000409909 CWC25Q9NXE8 425 aaPredicted RBP22.74■■□□□ 1.23
LSM5-204ENST00000409909 PCCAP05165 728 aaPredicted RBP22.73■■□□□ 1.23
LSM5-204ENST00000409909 COL4A1P02462 1669 aa22.73■■□□□ 1.23
LSM5-204ENST00000409909 ZNF521Q96K83 1311 aa22.73■■□□□ 1.23
LSM5-204ENST00000409909 CELF1Q92879 486 aaKnown RBP22.72■■□□□ 1.23
LSM5-204ENST00000409909 L3MBTL3Q96JM7 780 aaPredicted RBP22.72■■□□□ 1.23
LSM5-204ENST00000409909 RTFDC1Q9BY42 306 aaPredicted RBP22.72■■□□□ 1.23
LSM5-204ENST00000409909 TMX4Q9H1E5 349 aaPredicted RBP22.72■■□□□ 1.23
LSM5-204ENST00000409909 FLIIQ13045 1269 aa22.71■■□□□ 1.23
LSM5-204ENST00000409909 LARGE2Q8N3Y3 721 aa22.71■■□□□ 1.23
LSM5-204ENST00000409909 SMC1BQ8NDV3 1235 aa22.71■■□□□ 1.23
LSM5-204ENST00000409909 JDP2Q8WYK2 163 aa22.71■■□□□ 1.23
LSM5-204ENST00000409909 MYH16Q9H6N6 1097 aa22.71■■□□□ 1.23
LSM5-204ENST00000409909 CACNA1FO60840 1977 aa22.69■■□□□ 1.22
LSM5-204ENST00000409909 APLP1P51693 650 aa22.69■■□□□ 1.22
LSM5-204ENST00000409909 AOC3Q16853 763 aa22.69■■□□□ 1.22
LSM5-204ENST00000409909 CWF19L2Q2TBE0 894 aaKnown RBP22.69■■□□□ 1.22
LSM5-204ENST00000409909 DPP8Q6V1X1 898 aaPredicted RBP22.69■■□□□ 1.22
LSM5-204ENST00000409909 TMC4Q7Z404 712 aa22.69■■□□□ 1.22
LSM5-204ENST00000409909 MPNDQ8N594 471 aa22.69■■□□□ 1.22
LSM5-204ENST00000409909 PPIP5K2O43314 1243 aa22.68■■□□□ 1.22
LSM5-204ENST00000409909 NEURL1BA8MQ27 555 aa22.67■■□□□ 1.22
LSM5-204ENST00000409909 PDE8AO60658 829 aa22.67■■□□□ 1.22
LSM5-204ENST00000409909 POTEIP0CG38 1075 aa22.67■■□□□ 1.22
LSM5-204ENST00000409909 POTEJP0CG39 1038 aa22.67■■□□□ 1.22
LSM5-204ENST00000409909 HSP90B1P14625 803 aaKnown RBP22.67■■□□□ 1.22
LSM5-204ENST00000409909 NEXNQ0ZGT2 675 aa22.67■■□□□ 1.22
LSM5-204ENST00000409909 GPC2Q8N158 579 aa22.67■■□□□ 1.22
LSM5-204ENST00000409909 VPS33BQ9H267 617 aa22.67■■□□□ 1.22
LSM5-204ENST00000409909 SEC31BQ9NQW1 1179 aa22.67■■□□□ 1.22
LSM5-204ENST00000409909 LRRC37AA6NMS7 1700 aa22.67■■□□□ 1.22
LSM5-204ENST00000409909 SCN4AP35499 1836 aa22.66■■□□□ 1.22
LSM5-204ENST00000409909 CDHR2Q9BYE9 1310 aa22.66■■□□□ 1.22
LSM5-204ENST00000409909 IQCA1LA6NCM1 817 aa22.66■■□□□ 1.22
LSM5-204ENST00000409909 RPS8P62241 208 aaKnown RBP22.66■■□□□ 1.22
LSM5-204ENST00000409909 FKBP5Q13451 457 aaPredicted RBP22.66■■□□□ 1.22
LSM5-204ENST00000409909 SUPT20HQ8NEM7 779 aa22.66■■□□□ 1.22
LSM5-204ENST00000409909 TAF1DQ9H5J8 278 aaPredicted RBP22.66■■□□□ 1.22
LSM5-204ENST00000409909 DUOX1Q9NRD9 1551 aa22.65■■□□□ 1.22
LSM5-204ENST00000409909 EIF6P56537 245 aaKnown RBP22.65■■□□□ 1.22
LSM5-204ENST00000409909 NIM1KQ8IY84 436 aa22.65■■□□□ 1.22
LSM5-204ENST00000409909 H7C1W4 665 aa22.64■■□□□ 1.21
LSM5-204ENST00000409909 HTRA3P83110 453 aa22.64■■□□□ 1.21
LSM5-204ENST00000409909 KIAA2012Q0VF49 1180 aa22.64■■□□□ 1.21
LSM5-204ENST00000409909 CCDC152Q4G0S7 254 aa22.64■■□□□ 1.21
LSM5-204ENST00000409909 DNAAF4Q8WXU2 420 aa22.64■■□□□ 1.21
LSM5-204ENST00000409909 CCDC85AQ96PX6 553 aaPredicted RBP22.64■■□□□ 1.21
LSM5-204ENST00000409909 GJA3Q9Y6H8 435 aa22.64■■□□□ 1.21
LSM5-204ENST00000409909 CCER2I3L3R5 266 aa22.63■■□□□ 1.21
LSM5-204ENST00000409909 GPSM2P81274 684 aa22.63■■□□□ 1.21
LSM5-204ENST00000409909 DNAJC5GQ8N7S2 189 aa22.63■■□□□ 1.21
LSM5-204ENST00000409909 HACL1Q9UJ83 578 aa22.63■■□□□ 1.21
LSM5-204ENST00000409909 NSFL1CQ9UNZ2 370 aaKnown RBP22.63■■□□□ 1.21
LSM5-204ENST00000409909 GCKRQ14397 625 aa22.62■■□□□ 1.21
LSM5-204ENST00000409909 ZNRF3Q9ULT6 936 aa22.62■■□□□ 1.21
LSM5-204ENST00000409909 F6X3S4 739 aa22.61■■□□□ 1.21
LSM5-204ENST00000409909 CTSWP56202 376 aa22.61■■□□□ 1.21
LSM5-204ENST00000409909 CHADLQ6NUI6 762 aa22.61■■□□□ 1.21
LSM5-204ENST00000409909 UBE3BQ7Z3V4 1068 aa22.61■■□□□ 1.21
LSM5-204ENST00000409909 LINS1Q8NG48 757 aa22.61■■□□□ 1.21
LSM5-204ENST00000409909 TTLL11Q8NHH1 800 aa22.61■■□□□ 1.21
LSM5-204ENST00000409909 POLLQ9UGP5 575 aa22.61■■□□□ 1.21
LSM5-204ENST00000409909 EPHX2P34913 555 aa22.6■■□□□ 1.21
LSM5-204ENST00000409909 CASP7P55210 303 aa22.6■■□□□ 1.21
LSM5-204ENST00000409909 CXCL9Q07325 125 aa22.6■■□□□ 1.21
LSM5-204ENST00000409909 LTBP1Q14766 1721 aa22.6■■□□□ 1.21
LSM5-204ENST00000409909 SCNN1DP51172 638 aa22.59■■□□□ 1.21
LSM5-204ENST00000409909 LDHDQ86WU2 507 aa22.59■■□□□ 1.21
LSM5-204ENST00000409909 SLFN5Q08AF3 891 aa22.58■■□□□ 1.21
LSM5-204ENST00000409909 WASHC4Q2M389 1173 aa22.58■■□□□ 1.21
LSM5-204ENST00000409909 EAPPQ56P03 285 aaPredicted RBP22.58■■□□□ 1.21
LSM5-204ENST00000409909 GREM2Q9H772 168 aa22.58■■□□□ 1.21
LSM5-204ENST00000409909 PCNTO95613 3336 aa22.58■■□□□ 1.2
LSM5-204ENST00000409909 MYH3P11055 1940 aa22.57■■□□□ 1.2
LSM5-204ENST00000409909 YDJCA8MPS7 323 aa22.57■■□□□ 1.2
LSM5-204ENST00000409909 E9PSI1 815 aa22.57■■□□□ 1.2
LSM5-204ENST00000409909 C6orf229H3BNL8 230 aa22.57■■□□□ 1.2
LSM5-204ENST00000409909 EPS15P42566 896 aa22.57■■□□□ 1.2
LSM5-204ENST00000409909 BEND3Q5T5X7 828 aa22.57■■□□□ 1.2
LSM5-204ENST00000409909 TBC1D16Q8TBP0 767 aa22.57■■□□□ 1.2
LSM5-204ENST00000409909 CDCA7LQ96GN5 454 aa22.57■■□□□ 1.2
LSM5-204ENST00000409909 GPR101Q96P66 508 aaPredicted RBP22.57■■□□□ 1.2
LSM5-204ENST00000409909 PODXL2Q9NZ53 605 aa22.57■■□□□ 1.2
LSM5-204ENST00000409909 ADAMTSL1Q8N6G6 1762 aa22.56■■□□□ 1.2
LSM5-204ENST00000409909 RIMBP2O15034 1052 aa22.56■■□□□ 1.2
LSM5-204ENST00000409909 PNMA8AQ86V59 439 aaPredicted RBP22.56■■□□□ 1.2
LSM5-204ENST00000409909 ANKRD18AQ8IVF6 992 aa22.56■■□□□ 1.2
LSM5-204ENST00000409909 PLA2G12BQ9BX93 195 aa22.56■■□□□ 1.2
LSM5-204ENST00000409909 RTL9Q8NET4 1388 aa22.55■■□□□ 1.2
LSM5-204ENST00000409909 RAD17O75943 681 aa22.55■■□□□ 1.2
LSM5-204ENST00000409909 LMOD1P29536 600 aaPredicted RBP22.54■■□□□ 1.2
LSM5-204ENST00000409909 CIAPIN1Q6FI81 312 aa22.54■■□□□ 1.2
LSM5-204ENST00000409909 DBNDD1Q9H9R9 158 aa22.54■■□□□ 1.2
LSM5-204ENST00000409909 ANKIB1Q9P2G1 1089 aa22.54■■□□□ 1.2
LSM5-204ENST00000409909 CLEC11AQ9Y240 323 aa22.54■■□□□ 1.2
LSM5-204ENST00000409909 ITGBL1O95965 494 aaPredicted RBP22.53■■□□□ 1.2
LSM5-204ENST00000409909 GMPSP49915 693 aaPredicted RBP22.53■■□□□ 1.2
LSM5-204ENST00000409909 CDC5LQ99459 802 aaKnown RBP22.53■■□□□ 1.2
LSM5-204ENST00000409909 GPRC5DQ9NZD1 345 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms