RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 MAP3K2Q9Y2U5 619 aa9.21□□□□□ -0.93
CXCR4-202ENST00000409817 UTYO14607 1347 aa9.21□□□□□ -0.93
CXCR4-202ENST00000409817 AHDC1Q5TGY3 1603 aaPredicted RBP9.21□□□□□ -0.94
CXCR4-202ENST00000409817 LAMB4A4D0S4 1761 aa9.21□□□□□ -0.94
CXCR4-202ENST00000409817 PDE1AP54750 535 aa9.21□□□□□ -0.94
CXCR4-202ENST00000409817 NEXNQ0ZGT2 675 aa9.21□□□□□ -0.94
CXCR4-202ENST00000409817 ZNF496Q96IT1 587 aaPredicted RBP9.21□□□□□ -0.94
CXCR4-202ENST00000409817 STAP2Q9UGK3 403 aa9.21□□□□□ -0.94
CXCR4-202ENST00000409817 SALL3Q9BXA9 1300 aa9.21□□□□□ -0.94
CXCR4-202ENST00000409817 EVA1CP58658 441 aa9.2□□□□□ -0.94
CXCR4-202ENST00000409817 PPP1R42Q7Z4L9 355 aa9.2□□□□□ -0.94
CXCR4-202ENST00000409817 RBM46Q8TBY0 533 aaKnown RBP9.2□□□□□ -0.94
CXCR4-202ENST00000409817 SNX21Q969T3 373 aa9.2□□□□□ -0.94
CXCR4-202ENST00000409817 KIF1BPQ96EK5 621 aa9.2□□□□□ -0.94
CXCR4-202ENST00000409817 C9orf78Q9NZ63 289 aaPredicted RBP9.2□□□□□ -0.94
CXCR4-202ENST00000409817 EXOC6BQ9Y2D4 811 aa9.2□□□□□ -0.94
CXCR4-202ENST00000409817 C5P01031 1676 aa9.2□□□□□ -0.94
CXCR4-202ENST00000409817 SRGAP3O43295 1099 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 SMARCA5O60264 1052 aaPredicted RBP9.19□□□□□ -0.94
CXCR4-202ENST00000409817 NBPF7P0C2Y1 421 aaPredicted RBP9.19□□□□□ -0.94
CXCR4-202ENST00000409817 MX1P20591 662 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 SLC39A6Q13433 755 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 PROSER3Q2NL68 480 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 C16orf71Q8IYS4 520 aaPredicted RBP9.19□□□□□ -0.94
CXCR4-202ENST00000409817 COL22A1Q8NFW1 1626 aaPredicted RBP9.19□□□□□ -0.94
CXCR4-202ENST00000409817 COL14A1Q05707 1796 aaKnown RBP9.19□□□□□ -0.94
CXCR4-202ENST00000409817 RCCD1A6NED2 376 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 GRM8O00222 908 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 REC8O95072 547 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 ANXA1P04083 346 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 SDSP20132 328 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 RIC3Q7Z5B4 369 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 ERC1Q8IUD2 1116 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 TBC1D2Q9BYX2 928 aa9.19□□□□□ -0.94
CXCR4-202ENST00000409817 UBR2Q8IWV8 1755 aa9.18□□□□□ -0.94
CXCR4-202ENST00000409817 COL15A1P39059 1388 aa9.18□□□□□ -0.94
CXCR4-202ENST00000409817 PRAMEF22A3QJZ6 481 aa9.18□□□□□ -0.94
CXCR4-202ENST00000409817 APBB1O00213 710 aa9.18□□□□□ -0.94
CXCR4-202ENST00000409817 EPB41L2O43491 1005 aaKnown RBP9.18□□□□□ -0.94
CXCR4-202ENST00000409817 SURF6O75683 361 aaKnown RBP9.18□□□□□ -0.94
CXCR4-202ENST00000409817 PPP4R3BQ5MIZ7 849 aa9.18□□□□□ -0.94
CXCR4-202ENST00000409817 HSCBQ8IWL3 235 aa9.18□□□□□ -0.94
CXCR4-202ENST00000409817 ZNF710Q8N1W2 664 aa9.18□□□□□ -0.94
CXCR4-202ENST00000409817 OTUD7AQ8TE49 926 aaPredicted RBP9.18□□□□□ -0.94
CXCR4-202ENST00000409817 METTL22Q9BUU2 404 aaPredicted RBP9.18□□□□□ -0.94
CXCR4-202ENST00000409817 PAPPAQ13219 1627 aa9.18□□□□□ -0.94
CXCR4-202ENST00000409817 ANKRD13DQ6ZTN6 518 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 LRP10Q7Z4F1 713 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 RHPN1Q8TCX5 695 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 SHANK3Q9BYB0 1731 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 GLI3P10071 1580 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 TNS2Q63HR2 1409 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 ROBO1Q9Y6N7 1651 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.17□□□□□ -0.94
CXCR4-202ENST00000409817 PPP1R3GB7ZBB8 358 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 XAGE3Q8WTP9 111 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 USP16Q9Y5T5 823 aa9.17□□□□□ -0.94
CXCR4-202ENST00000409817 TUBGCP6Q96RT7 1819 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 TTC41PQ6P2S7 1318 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 USP42Q9H9J4 1324 aaKnown RBP9.16□□□□□ -0.94
CXCR4-202ENST00000409817 A6NJR5 290 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 ERC2O15083 957 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 CLK2P49760 499 aaKnown RBP9.16□□□□□ -0.94
CXCR4-202ENST00000409817 COPS6Q7L5N1 327 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 PLBD2Q8NHP8 589 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 TEX13AQ9BXU3 409 aaPredicted RBP9.16□□□□□ -0.94
CXCR4-202ENST00000409817 SCUBE2Q9NQ36 999 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 STRN4Q9NRL3 753 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 PLSCR2Q9NRY7 297 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 LIMD1Q9UGP4 676 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 PLCH1Q4KWH8 1693 aa9.16□□□□□ -0.94
CXCR4-202ENST00000409817 KCPQ6ZWJ8 1503 aa9.15□□□□□ -0.94
CXCR4-202ENST00000409817 NEURL1BA8MQ27 555 aa9.15□□□□□ -0.94
CXCR4-202ENST00000409817 AIMP1Q12904 312 aaKnown RBP9.15□□□□□ -0.94
CXCR4-202ENST00000409817 GCKRQ14397 625 aa9.15□□□□□ -0.94
CXCR4-202ENST00000409817 RABEP1Q15276 862 aa9.15□□□□□ -0.94
CXCR4-202ENST00000409817 CWF19L2Q2TBE0 894 aaKnown RBP9.15□□□□□ -0.94
CXCR4-202ENST00000409817 CDCA7Q9BWT1 371 aaPredicted RBP9.15□□□□□ -0.94
CXCR4-202ENST00000409817 USP26Q9BXU7 913 aa9.15□□□□□ -0.94
CXCR4-202ENST00000409817 DISP2A7MBM2 1401 aa9.15□□□□□ -0.94
CXCR4-202ENST00000409817 LRP6O75581 1613 aa9.15□□□□□ -0.94
CXCR4-202ENST00000409817 LTBP4Q8N2S1 1624 aa9.15□□□□□ -0.94
CXCR4-202ENST00000409817 IGKV5-2P06315 115 aa9.15□□□□□ -0.95
CXCR4-202ENST00000409817 MYL6BP14649 208 aa9.15□□□□□ -0.95
CXCR4-202ENST00000409817 CD46P15529 392 aa9.15□□□□□ -0.95
CXCR4-202ENST00000409817 NUDT18Q6ZVK8 323 aa9.15□□□□□ -0.95
CXCR4-202ENST00000409817 CLASRPQ8N2M8 674 aaKnown RBP9.15□□□□□ -0.95
CXCR4-202ENST00000409817 GPATCH3Q96I76 525 aa9.15□□□□□ -0.95
CXCR4-202ENST00000409817 ANTXR1Q9H6X2 564 aa9.15□□□□□ -0.95
CXCR4-202ENST00000409817 BTG4Q9NY30 223 aa9.15□□□□□ -0.95
CXCR4-202ENST00000409817 PSDA5PKW4 1024 aaPredicted RBP9.14□□□□□ -0.95
CXCR4-202ENST00000409817 HOXB1P14653 301 aaPredicted RBP9.14□□□□□ -0.95
CXCR4-202ENST00000409817 OS9Q13438 667 aaPredicted RBP9.14□□□□□ -0.95
CXCR4-202ENST00000409817 NFKBIBQ15653 356 aa9.14□□□□□ -0.95
CXCR4-202ENST00000409817 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
CXCR4-202ENST00000409817 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
CXCR4-202ENST00000409817 KIF2CQ99661 725 aa9.14□□□□□ -0.95
CXCR4-202ENST00000409817 TMOD3Q9NYL9 352 aa9.14□□□□□ -0.95
CXCR4-202ENST00000409817 ARFGEF2Q9Y6D5 1785 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms