RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 RABL6Q3YEC7 729 aaPredicted RBP23.84■■□□□ 1.41
LIMS2-207ENST00000409808 LMBR1LQ6UX01 489 aa23.84■■□□□ 1.41
LIMS2-207ENST00000409808 GIGYF2Q6Y7W6 1299 aaKnown RBP23.84■■□□□ 1.41
LIMS2-207ENST00000409808 ANO2Q9NQ90 1003 aa23.84■■□□□ 1.41
LIMS2-207ENST00000409808 TRPC5Q9UL62 973 aaPredicted RBP23.84■■□□□ 1.41
LIMS2-207ENST00000409808 ATRNO75882 1429 aa23.84■■□□□ 1.41
LIMS2-207ENST00000409808 DZIP3Q86Y13 1208 aaKnown RBP23.83■■□□□ 1.41
LIMS2-207ENST00000409808 SMARCC1Q92922 1105 aaPredicted RBP23.83■■□□□ 1.41
LIMS2-207ENST00000409808 SASH1O94885 1247 aa23.83■■□□□ 1.4
LIMS2-207ENST00000409808 ZSCAN30Q86W11 494 aa23.83■■□□□ 1.4
LIMS2-207ENST00000409808 GPT2Q8TD30 523 aa23.83■■□□□ 1.4
LIMS2-207ENST00000409808 QTRT2Q9H974 415 aaKnown RBP23.83■■□□□ 1.4
LIMS2-207ENST00000409808 CHMP3Q9Y3E7 222 aa23.83■■□□□ 1.4
LIMS2-207ENST00000409808 RFX5P48382 616 aaPredicted RBP23.82■■□□□ 1.4
LIMS2-207ENST00000409808 G3BP1Q13283 466 aaKnown RBP eCLIP23.82■■□□□ 1.4
LIMS2-207ENST00000409808 SEPT12Q8IYM1 358 aa23.82■■□□□ 1.4
LIMS2-207ENST00000409808 SYNE4Q8N205 404 aa23.82■■□□□ 1.4
LIMS2-207ENST00000409808 COL15A1P39059 1388 aa23.81■■□□□ 1.4
LIMS2-207ENST00000409808 AK9Q5TCS8 1911 aa23.81■■□□□ 1.4
LIMS2-207ENST00000409808 EIF5P55010 431 aaKnown RBP23.81■■□□□ 1.4
LIMS2-207ENST00000409808 FAM89AQ96GI7 184 aa23.81■■□□□ 1.4
LIMS2-207ENST00000409808 NUP98P52948 1817 aa23.81■■□□□ 1.4
LIMS2-207ENST00000409808 PTPN12Q05209 780 aaKnown RBP23.8■■□□□ 1.4
LIMS2-207ENST00000409808 LRSAM1Q6UWE0 723 aa23.79■■□□□ 1.4
LIMS2-207ENST00000409808 PALD1Q9ULE6 856 aa23.79■■□□□ 1.4
LIMS2-207ENST00000409808 BTAF1O14981 1849 aa23.79■■□□□ 1.4
LIMS2-207ENST00000409808 HSPA4P34932 840 aa23.79■■□□□ 1.4
LIMS2-207ENST00000409808 TRIM28Q13263 835 aaKnown RBP23.79■■□□□ 1.4
LIMS2-207ENST00000409808 LINC00116Q8NCU8 138 aa23.79■■□□□ 1.4
LIMS2-207ENST00000409808 ONECUT3O60422 494 aaPredicted RBP23.78■■□□□ 1.4
LIMS2-207ENST00000409808 ERC1Q8IUD2 1116 aa23.78■■□□□ 1.4
LIMS2-207ENST00000409808 EP400Q96L91 3159 aa23.78■■□□□ 1.4
LIMS2-207ENST00000409808 MAP4K4O95819 1239 aaPredicted RBP23.78■■□□□ 1.4
LIMS2-207ENST00000409808 NLRP10Q86W26 655 aa23.78■■□□□ 1.4
LIMS2-207ENST00000409808 CLASRPQ8N2M8 674 aaKnown RBP23.78■■□□□ 1.4
LIMS2-207ENST00000409808 PDLIM2Q96JY6 352 aa23.78■■□□□ 1.4
LIMS2-207ENST00000409808 RBSNQ9H1K0 784 aa23.78■■□□□ 1.4
LIMS2-207ENST00000409808 COPRSQ9NQ92 184 aa23.77■■□□□ 1.4
LIMS2-207ENST00000409808 SMIM5Q71RC9 77 aa23.77■■□□□ 1.4
LIMS2-207ENST00000409808 ANKRD36CQ5JPF3 1778 aa23.76■■□□□ 1.39
LIMS2-207ENST00000409808 COL5A3P25940 1745 aaPredicted RBP23.76■■□□□ 1.39
LIMS2-207ENST00000409808 AACSQ86V21 672 aa23.76■■□□□ 1.39
LIMS2-207ENST00000409808 PI4K2BQ8TCG2 481 aa23.76■■□□□ 1.39
LIMS2-207ENST00000409808 SYAP1Q96A49 352 aaPredicted RBP23.76■■□□□ 1.39
LIMS2-207ENST00000409808 EAF2Q96CJ1 260 aaPredicted RBP23.76■■□□□ 1.39
LIMS2-207ENST00000409808 CCDC85AQ96PX6 553 aaPredicted RBP23.76■■□□□ 1.39
LIMS2-207ENST00000409808 RREB1Q92766 1687 aa23.76■■□□□ 1.39
LIMS2-207ENST00000409808 NHSQ6T4R5 1651 aa23.75■■□□□ 1.39
LIMS2-207ENST00000409808 CICQ96RK0 1608 aaPredicted RBP23.75■■□□□ 1.39
LIMS2-207ENST00000409808 ERVV-1B6SEH8 477 aa23.75■■□□□ 1.39
LIMS2-207ENST00000409808 PCCAP05165 728 aaPredicted RBP23.75■■□□□ 1.39
LIMS2-207ENST00000409808 MSNP26038 577 aaKnown RBP23.75■■□□□ 1.39
LIMS2-207ENST00000409808 ZBTB38Q8NAP3 1195 aaPredicted RBP23.75■■□□□ 1.39
LIMS2-207ENST00000409808 CCDC8Q9H0W5 538 aaPredicted RBP23.75■■□□□ 1.39
LIMS2-207ENST00000409808 UBN2Q6ZU65 1347 aa23.75■■□□□ 1.39
LIMS2-207ENST00000409808 HSP90AB3PQ58FF7 597 aa23.75■■□□□ 1.39
LIMS2-207ENST00000409808 ZNF594Q96JF6 807 aaPredicted RBP23.75■■□□□ 1.39
LIMS2-207ENST00000409808 TMEM63CQ9P1W3 806 aa23.75■■□□□ 1.39
LIMS2-207ENST00000409808 IFIT2P09913 472 aaKnown RBP23.74■■□□□ 1.39
LIMS2-207ENST00000409808 TLR7Q9NYK1 1049 aaKnown RBP23.74■■□□□ 1.39
LIMS2-207ENST00000409808 SBF2Q86WG5 1849 aa23.74■■□□□ 1.39
LIMS2-207ENST00000409808 WDR33Q9C0J8 1336 aaKnown RBP23.74■■□□□ 1.39
LIMS2-207ENST00000409808 CNTROBQ8N137 903 aa23.73■■□□□ 1.39
LIMS2-207ENST00000409808 TFCP2Q12800 502 aa23.73■■□□□ 1.39
LIMS2-207ENST00000409808 RBM27Q9P2N5 1060 aaKnown RBP23.73■■□□□ 1.39
LIMS2-207ENST00000409808 USP42Q9H9J4 1324 aaKnown RBP23.73■■□□□ 1.39
LIMS2-207ENST00000409808 SGSM2O43147 1006 aa23.72■■□□□ 1.39
LIMS2-207ENST00000409808 CAMTA2O94983 1202 aa23.72■■□□□ 1.39
LIMS2-207ENST00000409808 TPM2P07951 284 aa23.72■■□□□ 1.39
LIMS2-207ENST00000409808 RAD50Q92878 1312 aa23.72■■□□□ 1.39
LIMS2-207ENST00000409808 FAM177BA6PVY3 158 aa23.72■■□□□ 1.39
LIMS2-207ENST00000409808 ZNF34Q8IZ26 560 aa23.72■■□□□ 1.39
LIMS2-207ENST00000409808 TRMT112Q9UI30 125 aaKnown RBP23.72■■□□□ 1.39
LIMS2-207ENST00000409808 TTC41PQ6P2S7 1318 aa23.71■■□□□ 1.39
LIMS2-207ENST00000409808 NOL7Q9UMY1 257 aaKnown RBP23.71■■□□□ 1.39
LIMS2-207ENST00000409808 PHF14O94880 888 aa23.7■■□□□ 1.38
LIMS2-207ENST00000409808 MCM5P33992 734 aa23.7■■□□□ 1.38
LIMS2-207ENST00000409808 ZNF831Q5JPB2 1677 aa23.69■■□□□ 1.38
LIMS2-207ENST00000409808 SYCE3A1L190 88 aa23.69■■□□□ 1.38
LIMS2-207ENST00000409808 ECHDC1Q9NTX5 307 aa23.69■■□□□ 1.38
LIMS2-207ENST00000409808 OFD1O75665 1012 aa23.68■■□□□ 1.38
LIMS2-207ENST00000409808 TERF1P54274 439 aa23.68■■□□□ 1.38
LIMS2-207ENST00000409808 LRRC24Q50LG9 513 aa23.68■■□□□ 1.38
LIMS2-207ENST00000409808 KIAA1211Q6ZU35 1233 aa23.68■■□□□ 1.38
LIMS2-207ENST00000409808 ATG9AQ7Z3C6 839 aa23.68■■□□□ 1.38
LIMS2-207ENST00000409808 PUS3Q9BZE2 481 aaKnown RBP23.68■■□□□ 1.38
LIMS2-207ENST00000409808 CCNL1Q9UK58 526 aaPredicted RBP23.68■■□□□ 1.38
LIMS2-207ENST00000409808 BRWD3Q6RI45 1802 aa23.68■■□□□ 1.38
LIMS2-207ENST00000409808 SUSD4Q5VX71 490 aa23.68■■□□□ 1.38
LIMS2-207ENST00000409808 KLHL34Q8N239 644 aa23.68■■□□□ 1.38
LIMS2-207ENST00000409808 UPF3BQ9BZI7 483 aaKnown RBP23.68■■□□□ 1.38
LIMS2-207ENST00000409808 IRS4O14654 1257 aaPredicted RBP23.67■■□□□ 1.38
LIMS2-207ENST00000409808 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.67■■□□□ 1.38
LIMS2-207ENST00000409808 PLA2G12BQ9BX93 195 aa23.67■■□□□ 1.38
LIMS2-207ENST00000409808 GLRX3O76003 335 aaKnown RBP23.67■■□□□ 1.38
LIMS2-207ENST00000409808 FOXD4L5Q5VV16 416 aaPredicted RBP23.67■■□□□ 1.38
LIMS2-207ENST00000409808 RUFY2Q8WXA3 655 aa23.67■■□□□ 1.38
LIMS2-207ENST00000409808 FOXD4L4Q8WXT5 416 aaPredicted RBP23.67■■□□□ 1.38
LIMS2-207ENST00000409808 LSG1Q9H089 658 aaKnown RBP23.67■■□□□ 1.38
LIMS2-207ENST00000409808 TMEM87AQ8NBN3 555 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms