RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ZCRB1Q8TBF4 217 aaKnown RBP9.64□□□□□ -0.87
SCN9A-203ENST00000409672 TTLL3Q9Y4R7 772 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 TTC30BQ8N4P2 665 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 RNF169Q8NCN4 708 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 PPM1EQ8WY54 764 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 EXOC1Q9NV70 894 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 SMIM23A6NLE4 172 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 RXRAP19793 462 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 MX1P20591 662 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 MAP3K11Q16584 847 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 TRIM6Q9C030 488 aaPredicted RBP9.64□□□□□ -0.87
SCN9A-203ENST00000409672 JADE2Q9NQC1 790 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 CFAP58Q5T655 872 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 FSD2A1L4K1 749 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 MYCLP12524 364 aaPredicted RBP9.64□□□□□ -0.87
SCN9A-203ENST00000409672 CEP83Q9Y592 693 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 NAPAP54920 295 aa9.64□□□□□ -0.87
SCN9A-203ENST00000409672 MKRN3Q13064 507 aaKnown RBP9.64□□□□□ -0.87
SCN9A-203ENST00000409672 RNF41Q9H4P4 317 aaPredicted RBP9.64□□□□□ -0.87
SCN9A-203ENST00000409672 TTC21AQ8NDW8 1320 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 KIF5CO60282 957 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 TBC1D5Q92609 795 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 HYPKQ9NX55 129 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 ERLIN1O75477 346 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 MXRA7P84157 204 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 IFRD2Q12894 506 aaPredicted RBP9.63□□□□□ -0.87
SCN9A-203ENST00000409672 ARHGAP27Q6ZUM4 889 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 GPCPD1Q9NPB8 672 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 NESP48681 1621 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 TTC30AQ86WT1 665 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 GTF3C6Q969F1 213 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 LRRC59Q96AG4 307 aaKnown RBP9.63□□□□□ -0.87
SCN9A-203ENST00000409672 LDHCP07864 332 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 FAM98CQ17RN3 349 aaKnown RBP9.63□□□□□ -0.87
SCN9A-203ENST00000409672 NAA16Q6N069 864 aaPredicted RBP9.63□□□□□ -0.87
SCN9A-203ENST00000409672 MAATS1Q7Z4T9 603 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 FSIP1Q8NA03 581 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 DNAAF4Q8WXU2 420 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 SPDYE3A6NKU9 549 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 GCOM1H8Y6P7 765 aaPredicted RBP9.63□□□□□ -0.87
SCN9A-203ENST00000409672 MYZAPP0CAP1 466 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 KRT5P13647 590 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 AMOTQ4VCS5 1084 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 MAGEB6Q8N7X4 407 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 TIGD1Q96MW7 591 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 TTF1Q15361 905 aaPredicted RBP9.63□□□□□ -0.87
SCN9A-203ENST00000409672 GEN1Q17RS7 908 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 ZNF804AQ7Z570 1209 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 IFNL2Q8IZJ0 200 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 MRRFQ96E11 262 aaKnown RBP9.63□□□□□ -0.87
SCN9A-203ENST00000409672 BRPF3Q9ULD4 1205 aa9.63□□□□□ -0.87
SCN9A-203ENST00000409672 KRT13P13646 458 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 STAT6P42226 847 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 GSTO1P78417 241 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 DZIP3Q86Y13 1208 aaKnown RBP9.62□□□□□ -0.87
SCN9A-203ENST00000409672 TCEANC2Q96MN5 208 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 BCS1LQ9Y276 419 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 PI4KAP2A4QPH2 592 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 MRE11P49959 708 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 PI4KAP1Q8N8J0 262 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 GIMAP7Q8NHV1 300 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 EPRSP07814 1512 aaKnown RBP9.62□□□□□ -0.87
SCN9A-203ENST00000409672 PTPDC1A2A3K4 754 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 FCHSD2O94868 740 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 CFTRP13569 1480 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 GLRX3O76003 335 aaKnown RBP9.62□□□□□ -0.87
SCN9A-203ENST00000409672 FAM13AO94988 1023 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 STXBP4Q6ZWJ1 553 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 TMOD4Q9NZQ9 345 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 APBA3O96018 575 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 IARSP41252 1262 aaKnown RBP9.62□□□□□ -0.87
SCN9A-203ENST00000409672 DDX17Q92841 729 aaKnown RBP9.62□□□□□ -0.87
SCN9A-203ENST00000409672 WTAPQ15007 396 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 MCM9Q9NXL9 1143 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 CHPF2Q9P2E5 772 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 FCHSD1Q86WN1 690 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 TRIM47Q96LD4 638 aa9.62□□□□□ -0.87
SCN9A-203ENST00000409672 LRPPRCP42704 1394 aaKnown RBP9.62□□□□□ -0.87
SCN9A-203ENST00000409672 AMPD3Q01432 767 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 SLC52A1Q9NWF4 448 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 C9orf84Q5VXU9 1444 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 USH1GQ495M9 461 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 CCDC12Q8WUD4 166 aaPredicted RBP9.61□□□□□ -0.87
SCN9A-203ENST00000409672 PFDN4Q9NQP4 134 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 HMGB2P26583 209 aaKnown RBP9.61□□□□□ -0.87
SCN9A-203ENST00000409672 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 NECAB1Q8N987 351 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 IL27Q8NEV9 243 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 BTG4Q9NY30 223 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 MAGEB6P1A0A0J9YX57 407 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 NOP56O00567 594 aaKnown RBP9.61□□□□□ -0.87
SCN9A-203ENST00000409672 LPXNO60711 386 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 USO1O60763 962 aaKnown RBP9.61□□□□□ -0.87
SCN9A-203ENST00000409672 CPXCR1Q8N123 301 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 PRDM10Q9NQV6 1147 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 CUX1P39880 1505 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 ERCC5P28715 1186 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 311.8 ms