RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 RALGAPBQ86X10 1494 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 PTCH1Q13635 1447 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 CYP7A1P22680 504 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 KRT32Q14532 448 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 INSRP06213 1382 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 KIF24Q5T7B8 1368 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 TSPY2A6NKD2 308 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 NOC3LQ8WTT2 800 aaKnown RBP8.83□□□□□ -1
SH3D19-203ENST00000409598 IL16Q14005 1332 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 CRB1P82279 1406 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 SLC15A2Q16348 729 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 LMBR1LQ6UX01 489 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 AEBP1Q8IUX7 1158 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 BRPF3Q9ULD4 1205 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 U3KPZ7 1027 aaPredicted RBP8.82□□□□□ -1
SH3D19-203ENST00000409598 ECM2O94769 699 aaPredicted RBP8.82□□□□□ -1
SH3D19-203ENST00000409598 OSBPP22059 807 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 ADGBQ8N7X0 1667 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 GRM8O00222 908 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 DESP17661 470 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 PNMA8AQ86V59 439 aaPredicted RBP8.82□□□□□ -1
SH3D19-203ENST00000409598 SLC4A8Q2Y0W8 1093 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 TEKT1Q969V4 418 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 ARID3AQ99856 593 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 PLEKHH1Q9ULM0 1364 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 ZFYP08048 801 aaPredicted RBP8.82□□□□□ -1
SH3D19-203ENST00000409598 HCLS1P14317 486 aaPredicted RBP8.82□□□□□ -1
SH3D19-203ENST00000409598 KAT14Q9H8E8 782 aa8.82□□□□□ -1
SH3D19-203ENST00000409598 C1orf167Q5SNV9 1468 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 ERBB3P21860 1342 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 DEFB132Q7Z7B7 95 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 DDX11Q96FC9 970 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 PNMA2Q9UL42 364 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 AATKQ6ZMQ8 1374 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 TPM1P09493 284 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 TSPY3P0CV98 308 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 TSPY8P0CW00 308 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 EPS15P42566 896 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 ANKRD1Q15327 319 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 EZH2Q15910 746 aaKnown RBP8.81□□□□□ -1
SH3D19-203ENST00000409598 HACL1Q9UJ83 578 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 GBP4Q96PP9 640 aa8.81□□□□□ -1
SH3D19-203ENST00000409598 ZBED4O75132 1171 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 A1BGP04217 495 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 APBB1IPQ7Z5R6 666 aaPredicted RBP8.8□□□□□ -1
SH3D19-203ENST00000409598 CATIPQ7Z7H3 387 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 TEX11Q8IYF3 940 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 CEP170BQ9Y4F5 1589 aaPredicted RBP8.8□□□□□ -1
SH3D19-203ENST00000409598 CDC45O75419 566 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 BAG4O95429 457 aaKnown RBP8.8□□□□□ -1
SH3D19-203ENST00000409598 ODF2Q5BJF6 829 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 AMER1Q5JTC6 1135 aaPredicted RBP8.8□□□□□ -1
SH3D19-203ENST00000409598 SPATA31A1Q5TZJ5 1347 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 FBLN1P23142 703 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 CCDC174Q6PII3 467 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 GNAT2P19087 354 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 RAB34Q9BZG1 259 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 LNPKQ9C0E8 428 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 PNMA3Q9UL41 463 aa8.8□□□□□ -1
SH3D19-203ENST00000409598 SPATA31A5Q5VU36 1347 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 SPATA31A7Q8IWB4 1347 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 MYO3BQ8WXR4 1341 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 ANXA1P04083 346 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 SYNMO15061 1565 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 PIP4K2AP48426 406 aaPredicted RBP8.79□□□□□ -1
SH3D19-203ENST00000409598 EXOC6Q8TAG9 804 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 ADGRB3O60242 1522 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 DCCP43146 1447 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 DRC7Q8IY82 874 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 ATP7BP35670 1465 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 MAGEB6P1A0A0J9YX57 407 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 BCAR3O75815 825 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 CNGA1P29973 690 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 CT47A1Q5JQC4 288 aaPredicted RBP8.79□□□□□ -1
SH3D19-203ENST00000409598 CLEC4GQ6UXB4 293 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 GADL1Q6ZQY3 521 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 TANGO6Q9C0B7 1094 aa8.79□□□□□ -1
SH3D19-203ENST00000409598 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
SH3D19-203ENST00000409598 ZEB2O60315 1214 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 GNAQP50148 359 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 CCDC24Q8N4L8 307 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 PCMTD1Q96MG8 357 aaPredicted RBP8.78□□□□□ -1
SH3D19-203ENST00000409598 SMC3Q9UQE7 1217 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 XDHP47989 1333 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 ZNF213O14771 459 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 PUM3Q15397 648 aaKnown RBP8.78□□□□□ -1
SH3D19-203ENST00000409598 FAM89AQ96GI7 184 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 LEMD3Q9Y2U8 911 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 C21orf2O43822 256 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 ITGA6P23229 1130 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 MBIPQ9NS73 344 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 SETD1BQ9UPS6 1966 aaKnown RBP8.78□□□□□ -1
SH3D19-203ENST00000409598 FMNL1O95466 1100 aaPredicted RBP8.78□□□□□ -1
SH3D19-203ENST00000409598 GTF2IP78347 998 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 CKAP2LQ8IYA6 745 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 ZNF496Q96IT1 587 aaPredicted RBP8.78□□□□□ -1
SH3D19-203ENST00000409598 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.78□□□□□ -1
SH3D19-203ENST00000409598 USP6P35125 1406 aa8.78□□□□□ -1
SH3D19-203ENST00000409598 M0QZ92 97 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 272.2 ms