RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 POLR3DP05423 398 aaPredicted RBP4.45□□□□□ -1.7
RGPD4-201ENST00000408999 TBC1D9Q6ZT07 1266 aa4.45□□□□□ -1.7
RGPD4-201ENST00000408999 TMEM2Q9UHN6 1383 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 DCAF8L1A6NGE4 600 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 MINDY4BA8MYZ0 360 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 UBAP1LF5GYI3 381 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 GOLIM4O00461 696 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 IKBKBO14920 756 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 ST5P78524 1137 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 GPT2Q8TD30 523 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 TRIM5Q9C035 493 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 FAM13BQ9NYF5 915 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 LMTK3Q96Q04 1460 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 RFC4P35249 363 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 DMTNQ08495 405 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 HDAC1Q13547 482 aaPredicted RBP4.44□□□□□ -1.7
RGPD4-201ENST00000408999 ANKRD13DQ6ZTN6 518 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 EYA1Q99502 592 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 MEIS3Q99687 375 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 NAPBQ9H115 298 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 ZNF219Q9P2Y4 722 aaPredicted RBP4.44□□□□□ -1.7
RGPD4-201ENST00000408999 IQSEC2Q5JU85 1478 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 ADCY9O60503 1353 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 ABCC3O15438 1527 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 KAT6BQ8WYB5 2073 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 TOM1O60784 492 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 MYCNP04198 464 aaPredicted RBP4.44□□□□□ -1.7
RGPD4-201ENST00000408999 CCDC192P0DO97 292 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 TTF1Q15361 905 aaPredicted RBP4.44□□□□□ -1.7
RGPD4-201ENST00000408999 TMEM132AQ24JP5 1023 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.44□□□□□ -1.7
RGPD4-201ENST00000408999 PRM3Q9NNZ6 103 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 TBX22Q9Y458 520 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 DDX60Q8IY21 1712 aaKnown RBP4.44□□□□□ -1.7
RGPD4-201ENST00000408999 TET3O43151 1660 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 MYOM2P54296 1465 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 RNMTO43148 476 aaKnown RBP4.44□□□□□ -1.7
RGPD4-201ENST00000408999 IP6K1Q92551 441 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 KCNN1Q92952 543 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 PHACTR3Q96KR7 559 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 ECHDC1Q9NTX5 307 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 DACH1Q9UI36 760 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 CIZ1Q9ULV3 898 aaPredicted RBP4.44□□□□□ -1.7
RGPD4-201ENST00000408999 CRYBG1Q9Y4K1 1723 aa4.44□□□□□ -1.7
RGPD4-201ENST00000408999 CCDC173Q0VFZ6 552 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 CCDC152Q4G0S7 254 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 CCAR1Q8IX12 1150 aaKnown RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 TSPYL6Q8N831 410 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 PPP1R9BQ96SB3 815 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 CDC5LQ99459 802 aaKnown RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 IQGAP3Q86VI3 1631 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 MAP3K19Q56UN5 1328 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 ZNF213O14771 459 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 GCP02774 474 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 HMGB1P09429 215 aaKnown RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 IL13P35225 146 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 NOP2P46087 812 aaKnown RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 BRPF1P55201 1214 aaPredicted RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 ST3GAL1Q11201 340 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 KSR2Q6VAB6 950 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 DDX46Q7L014 1031 aaKnown RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 COPS6Q7L5N1 327 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 SPC24Q8NBT2 197 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 ZNF287Q9HBT7 754 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 TMOD2Q9NZR1 351 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 SEC63Q9UGP8 760 aaKnown RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 CFAP45Q9UL16 551 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 ARHGEF10O15013 1369 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 DDB1Q16531 1140 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 FILIP1LQ4L180 1135 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 BMP2KLQ5H9B9 411 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 NBPF5PQ86XG9 351 aaPredicted RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 CRACR2BQ8N4Y2 399 aaPredicted RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 MKNK2Q9HBH9 465 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 SLC12A7Q9Y666 1083 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 MED14O60244 1454 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 PTPRTO14522 1441 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 KRT24Q2M2I5 525 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 TTLL5Q6EMB2 1281 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 LDHAL6AQ6ZMR3 332 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 RHPN1Q8TCX5 695 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 SMARCE1Q969G3 411 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 UPF3BQ9BZI7 483 aaKnown RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 RBSNQ9H1K0 784 aa4.43□□□□□ -1.7
RGPD4-201ENST00000408999 SH2B1Q9NRF2 756 aaPredicted RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 ZC3H4Q9UPT8 1303 aaKnown RBP4.43□□□□□ -1.7
RGPD4-201ENST00000408999 RANBP6O60518 1105 aaKnown RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 SERPINC1P01008 464 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 TFRCP02786 760 aaKnown RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 SLC4A8Q2Y0W8 1093 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 CEP57L1Q8IYX8 460 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 LARP6Q9BRS8 491 aaKnown RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 NUP62CLQ9H1M0 184 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 CEP131Q9UPN4 1083 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 ADGRB1O14514 1584 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 NPC1L1Q9UHC9 1359 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 GOLGA8BA8MQT2 603 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 GRM8O00222 908 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 ALDH1L1O75891 902 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 ZNF76P36508 570 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms