RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 PDE3AQ14432 1141 aa10.56□□□□□ -0.72
GPC3-203ENST00000406757 CWF19L2Q2TBE0 894 aaKnown RBP10.56□□□□□ -0.72
GPC3-203ENST00000406757 TBC1D9BQ66K14 1250 aa10.56□□□□□ -0.72
GPC3-203ENST00000406757 CCDC24Q8N4L8 307 aa10.56□□□□□ -0.72
GPC3-203ENST00000406757 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
GPC3-203ENST00000406757 PLBD2Q8NHP8 589 aa10.56□□□□□ -0.72
GPC3-203ENST00000406757 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
GPC3-203ENST00000406757 MAP3K15Q6ZN16 1313 aa10.56□□□□□ -0.72
GPC3-203ENST00000406757 ZC3H4Q9UPT8 1303 aaKnown RBP10.56□□□□□ -0.72
GPC3-203ENST00000406757 CACNA1FO60840 1977 aa10.56□□□□□ -0.72
GPC3-203ENST00000406757 GLTPD2A6NH11 291 aa10.55□□□□□ -0.72
GPC3-203ENST00000406757 FAM177BA6PVY3 158 aa10.55□□□□□ -0.72
GPC3-203ENST00000406757 NFKBIEO00221 500 aa10.55□□□□□ -0.72
GPC3-203ENST00000406757 CAMTA2O94983 1202 aa10.55□□□□□ -0.72
GPC3-203ENST00000406757 BEND3Q5T5X7 828 aa10.55□□□□□ -0.72
GPC3-203ENST00000406757 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
GPC3-203ENST00000406757 METTL22Q9BUU2 404 aaPredicted RBP10.55□□□□□ -0.72
GPC3-203ENST00000406757 DLEC1Q9Y238 1755 aa10.54□□□□□ -0.72
GPC3-203ENST00000406757 A0A087WZG4 1122 aa10.54□□□□□ -0.72
GPC3-203ENST00000406757 IGKV5-2P06315 115 aa10.54□□□□□ -0.72
GPC3-203ENST00000406757 MS4A1P11836 297 aa10.54□□□□□ -0.72
GPC3-203ENST00000406757 VEGFAP15692 232 aaPredicted RBP10.54□□□□□ -0.72
GPC3-203ENST00000406757 MVPQ14764 893 aaKnown RBP10.54□□□□□ -0.72
GPC3-203ENST00000406757 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
GPC3-203ENST00000406757 INTS3Q68E01 1043 aaKnown RBP10.54□□□□□ -0.72
GPC3-203ENST00000406757 JMYQ8N9B5 988 aa10.54□□□□□ -0.72
GPC3-203ENST00000406757 ZNF622Q969S3 477 aaKnown RBP eCLIP10.54□□□□□ -0.72
GPC3-203ENST00000406757 MS4A3Q96HJ5 214 aa10.54□□□□□ -0.72
GPC3-203ENST00000406757 SRCIN1Q9C0H9 1055 aa10.54□□□□□ -0.72
GPC3-203ENST00000406757 C1orf115Q9H7X2 142 aa10.54□□□□□ -0.72
GPC3-203ENST00000406757 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
GPC3-203ENST00000406757 C21orf2O43822 256 aa10.53□□□□□ -0.72
GPC3-203ENST00000406757 CCT4P50991 539 aaKnown RBP10.53□□□□□ -0.72
GPC3-203ENST00000406757 TCIRG1Q13488 830 aa10.53□□□□□ -0.72
GPC3-203ENST00000406757 COL13A1Q5TAT6 717 aaPredicted RBP10.53□□□□□ -0.72
GPC3-203ENST00000406757 PRR5LQ6MZQ0 368 aa10.53□□□□□ -0.72
GPC3-203ENST00000406757 GIGYF2Q6Y7W6 1299 aaKnown RBP10.53□□□□□ -0.72
GPC3-203ENST00000406757 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
GPC3-203ENST00000406757 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
GPC3-203ENST00000406757 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.72
GPC3-203ENST00000406757 NEURL1BA8MQ27 555 aa10.52□□□□□ -0.73
GPC3-203ENST00000406757 ERVV-1B6SEH8 477 aa10.52□□□□□ -0.73
GPC3-203ENST00000406757 ZBTB7BO15156 539 aaPredicted RBP10.52□□□□□ -0.73
GPC3-203ENST00000406757 NPHP1O15259 732 aa10.52□□□□□ -0.73
GPC3-203ENST00000406757 PDE6BP35913 854 aa10.52□□□□□ -0.73
GPC3-203ENST00000406757 NEXNQ0ZGT2 675 aa10.52□□□□□ -0.73
GPC3-203ENST00000406757 LINS1Q8NG48 757 aa10.52□□□□□ -0.73
GPC3-203ENST00000406757 MEIS3Q99687 375 aa10.52□□□□□ -0.73
GPC3-203ENST00000406757 ISCA1Q9BUE6 129 aa10.52□□□□□ -0.73
GPC3-203ENST00000406757 BRIP1Q9BX63 1249 aa10.52□□□□□ -0.73
GPC3-203ENST00000406757 ANKRD31Q8N7Z5 1873 aa10.51□□□□□ -0.73
GPC3-203ENST00000406757 SCN7AQ01118 1682 aa10.51□□□□□ -0.73
GPC3-203ENST00000406757 POTECB2RU33 542 aa10.51□□□□□ -0.73
GPC3-203ENST00000406757 ATMINO43313 823 aaPredicted RBP10.51□□□□□ -0.73
GPC3-203ENST00000406757 ERFEQ4G0M1 354 aa10.51□□□□□ -0.73
GPC3-203ENST00000406757 DPY19L2Q6NUT2 758 aa10.51□□□□□ -0.73
GPC3-203ENST00000406757 ZNF34Q8IZ26 560 aa10.51□□□□□ -0.73
GPC3-203ENST00000406757 SYNE4Q8N205 404 aa10.51□□□□□ -0.73
GPC3-203ENST00000406757 SETDB2Q96T68 719 aa10.51□□□□□ -0.73
GPC3-203ENST00000406757 USP44Q9H0E7 712 aa10.51□□□□□ -0.73
GPC3-203ENST00000406757 NIP7Q9Y221 180 aaKnown RBP eCLIP10.51□□□□□ -0.733e-13■□□□□ 10.4
GPC3-203ENST00000406757 COL11A2P13942 1736 aaPredicted RBP10.5□□□□□ -0.73
GPC3-203ENST00000406757 NUP98P52948 1817 aa10.5□□□□□ -0.73
GPC3-203ENST00000406757 ALDH1L1O75891 902 aa10.5□□□□□ -0.73
GPC3-203ENST00000406757 NBPF7P0C2Y1 421 aaPredicted RBP10.5□□□□□ -0.73
GPC3-203ENST00000406757 GCKRQ14397 625 aa10.5□□□□□ -0.73
GPC3-203ENST00000406757 SUSD4Q5VX71 490 aa10.5□□□□□ -0.73
GPC3-203ENST00000406757 NLRP10Q86W26 655 aa10.5□□□□□ -0.73
GPC3-203ENST00000406757 CNBD1Q8NA66 436 aa10.5□□□□□ -0.73
GPC3-203ENST00000406757 CWC25Q9NXE8 425 aaPredicted RBP10.5□□□□□ -0.73
GPC3-203ENST00000406757 C9orf78Q9NZ63 289 aaPredicted RBP10.5□□□□□ -0.73
GPC3-203ENST00000406757 DDX19BQ9UMR2 479 aa10.5□□□□□ -0.73
GPC3-203ENST00000406757 PDZRN3Q9UPQ7 1066 aa10.5□□□□□ -0.73
GPC3-203ENST00000406757 UBN2Q6ZU65 1347 aa10.5□□□□□ -0.73
GPC3-203ENST00000406757 ST5P78524 1137 aa10.49□□□□□ -0.73
GPC3-203ENST00000406757 HSP90AB3PQ58FF7 597 aa10.49□□□□□ -0.73
GPC3-203ENST00000406757 FAM89AQ96GI7 184 aa10.49□□□□□ -0.73
GPC3-203ENST00000406757 TAOK3Q9H2K8 898 aa10.49□□□□□ -0.73
GPC3-203ENST00000406757 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
GPC3-203ENST00000406757 ZNF652Q9Y2D9 606 aa10.49□□□□□ -0.73
GPC3-203ENST00000406757 CCDC88AQ3V6T2 1871 aa10.49□□□□□ -0.73
GPC3-203ENST00000406757 GRM8O00222 908 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 DDNO94850 711 aaPredicted RBP10.48□□□□□ -0.73
GPC3-203ENST00000406757 SRGNP10124 158 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 C7P10643 843 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 PRPF40BQ6NWY9 871 aaKnown RBP10.48□□□□□ -0.73
GPC3-203ENST00000406757 UBE3BQ7Z3V4 1068 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 SLC39A7Q92504 469 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 CNKSR1Q969H4 720 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 ZBTB40Q9NUA8 1239 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 TRMT112Q9UI30 125 aaKnown RBP10.48□□□□□ -0.73
GPC3-203ENST00000406757 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
GPC3-203ENST00000406757 LRRFIP2Q9Y608 721 aaKnown RBP10.48□□□□□ -0.73
GPC3-203ENST00000406757 BCORQ6W2J9 1755 aa10.47□□□□□ -0.73
GPC3-203ENST00000406757 H7C1W4 665 aa10.47□□□□□ -0.73
GPC3-203ENST00000406757 UBTFL1P0CB47 393 aaPredicted RBP10.47□□□□□ -0.73
GPC3-203ENST00000406757 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
GPC3-203ENST00000406757 HSPA1AP0DMV8 641 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms