RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 WDR33Q9C0J8 1336 aaKnown RBP18.3■□□□□ 0.52
LIMK2-204ENST00000406516 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
LIMK2-204ENST00000406516 A1BGP04217 495 aa18.3■□□□□ 0.52
LIMK2-204ENST00000406516 SMIM5Q71RC9 77 aa18.3■□□□□ 0.52
LIMK2-204ENST00000406516 DIAPH3Q9NSV4 1193 aa18.3■□□□□ 0.52
LIMK2-204ENST00000406516 PA2G4Q9UQ80 394 aaKnown RBP18.3■□□□□ 0.52
LIMK2-204ENST00000406516 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
LIMK2-204ENST00000406516 GLRX3O76003 335 aaKnown RBP18.29■□□□□ 0.52
LIMK2-204ENST00000406516 AK2P54819 239 aa18.29■□□□□ 0.52
LIMK2-204ENST00000406516 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
LIMK2-204ENST00000406516 CLASRPQ8N2M8 674 aaKnown RBP18.29■□□□□ 0.52
LIMK2-204ENST00000406516 SOCS7O14512 581 aa18.29■□□□□ 0.52
LIMK2-204ENST00000406516 CPA1P15085 419 aa18.29■□□□□ 0.52
LIMK2-204ENST00000406516 PDLIM2Q96JY6 352 aa18.29■□□□□ 0.52
LIMK2-204ENST00000406516 STARD3NLO95772 234 aa18.28■□□□□ 0.52
LIMK2-204ENST00000406516 CRKLP46109 303 aaKnown RBP18.28■□□□□ 0.52
LIMK2-204ENST00000406516 TTC14Q96N46 770 aa18.28■□□□□ 0.52
LIMK2-204ENST00000406516 TEX13AQ9BXU3 409 aaPredicted RBP18.28■□□□□ 0.52
LIMK2-204ENST00000406516 TTC41PQ6P2S7 1318 aa18.28■□□□□ 0.52
LIMK2-204ENST00000406516 RPAP1Q9BWH6 1393 aaPredicted RBP18.28■□□□□ 0.52
LIMK2-204ENST00000406516 INTS5Q6P9B9 1019 aaKnown RBP18.28■□□□□ 0.52
LIMK2-204ENST00000406516 USP48Q86UV5 1035 aa18.27■□□□□ 0.52
LIMK2-204ENST00000406516 AMIGO3Q86WK7 504 aa18.27■□□□□ 0.52
LIMK2-204ENST00000406516 USP42Q9H9J4 1324 aaKnown RBP18.27■□□□□ 0.52
LIMK2-204ENST00000406516 MTX1Q13505 466 aa18.27■□□□□ 0.52
LIMK2-204ENST00000406516 ZNF827Q17R98 1081 aa18.27■□□□□ 0.52
LIMK2-204ENST00000406516 TPRNQ4KMQ1 711 aa18.27■□□□□ 0.52
LIMK2-204ENST00000406516 RUFY3Q7L099 469 aa18.27■□□□□ 0.52
LIMK2-204ENST00000406516 ZBTB1Q9Y2K1 713 aa18.27■□□□□ 0.52
LIMK2-204ENST00000406516 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
LIMK2-204ENST00000406516 KSR2Q6VAB6 950 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 ECHDC1Q9NTX5 307 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 IFIT2P09913 472 aaKnown RBP18.26■□□□□ 0.51
LIMK2-204ENST00000406516 SYAP1Q96A49 352 aaPredicted RBP18.26■□□□□ 0.51
LIMK2-204ENST00000406516 LIMCH1Q9UPQ0 1083 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 TJP1Q07157 1748 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 C5P01031 1676 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 PTH1RQ03431 593 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 NBPF14Q5TI25 921 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
LIMK2-204ENST00000406516 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
LIMK2-204ENST00000406516 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
LIMK2-204ENST00000406516 CCDC87Q9NVE4 849 aa18.25■□□□□ 0.51
LIMK2-204ENST00000406516 RGPD3A6NKT7 1758 aaPredicted RBP18.25■□□□□ 0.51
LIMK2-204ENST00000406516 RGPD4Q7Z3J3 1758 aa18.25■□□□□ 0.51
LIMK2-204ENST00000406516 DTNBO60941 627 aa18.25■□□□□ 0.51
LIMK2-204ENST00000406516 AIMP1Q12904 312 aaKnown RBP18.25■□□□□ 0.51
LIMK2-204ENST00000406516 HS1BP3Q53T59 392 aa18.25■□□□□ 0.51
LIMK2-204ENST00000406516 AACSQ86V21 672 aa18.25■□□□□ 0.51
LIMK2-204ENST00000406516 RUFY2Q8WXA3 655 aa18.25■□□□□ 0.51
LIMK2-204ENST00000406516 GPATCH3Q96I76 525 aa18.25■□□□□ 0.51
LIMK2-204ENST00000406516 TSPY26PQ9H489 355 aa18.25■□□□□ 0.51
LIMK2-204ENST00000406516 PDIA6Q15084 440 aa18.24■□□□□ 0.51
LIMK2-204ENST00000406516 PRPF40BQ6NWY9 871 aaKnown RBP18.24■□□□□ 0.51
LIMK2-204ENST00000406516 CNPY2Q9Y2B0 182 aa18.24■□□□□ 0.51
LIMK2-204ENST00000406516 GNPATO15228 680 aa18.24■□□□□ 0.51
LIMK2-204ENST00000406516 LARGE1O95461 756 aa18.24■□□□□ 0.51
LIMK2-204ENST00000406516 MYL6BP14649 208 aa18.24■□□□□ 0.51
LIMK2-204ENST00000406516 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
LIMK2-204ENST00000406516 AK7Q96M32 723 aa18.24■□□□□ 0.51
LIMK2-204ENST00000406516 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
LIMK2-204ENST00000406516 ZNF831Q5JPB2 1677 aa18.23■□□□□ 0.51
LIMK2-204ENST00000406516 JAKMIP1Q96N16 626 aaKnown RBP18.23■□□□□ 0.51
LIMK2-204ENST00000406516 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
LIMK2-204ENST00000406516 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
LIMK2-204ENST00000406516 SYT1P21579 422 aa18.23■□□□□ 0.51
LIMK2-204ENST00000406516 ADCK5Q3MIX3 580 aa18.23■□□□□ 0.51
LIMK2-204ENST00000406516 ERC1Q8IUD2 1116 aa18.23■□□□□ 0.51
LIMK2-204ENST00000406516 SUCLG2Q96I99 432 aa18.23■□□□□ 0.51
LIMK2-204ENST00000406516 NOL7Q9UMY1 257 aaKnown RBP18.23■□□□□ 0.51
LIMK2-204ENST00000406516 ZNF330Q9Y3S2 320 aaPredicted RBP18.23■□□□□ 0.51
LIMK2-204ENST00000406516 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.23■□□□□ 0.51
LIMK2-204ENST00000406516 TCHHQ07283 1943 aa18.23■□□□□ 0.51
LIMK2-204ENST00000406516 STX6O43752 255 aa18.22■□□□□ 0.51
LIMK2-204ENST00000406516 TFCP2L1Q9NZI6 479 aa18.22■□□□□ 0.51
LIMK2-204ENST00000406516 GRM8O00222 908 aa18.22■□□□□ 0.51
LIMK2-204ENST00000406516 SLC15A2Q16348 729 aa18.22■□□□□ 0.51
LIMK2-204ENST00000406516 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
LIMK2-204ENST00000406516 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
LIMK2-204ENST00000406516 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.22■□□□□ 0.51
LIMK2-204ENST00000406516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.22■□□□□ 0.51
LIMK2-204ENST00000406516 RREB1Q92766 1687 aa18.22■□□□□ 0.51
LIMK2-204ENST00000406516 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
LIMK2-204ENST00000406516 TAF1LQ8IZX4 1826 aa18.21■□□□□ 0.51
LIMK2-204ENST00000406516 PHF14O94880 888 aa18.21■□□□□ 0.51
LIMK2-204ENST00000406516 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
LIMK2-204ENST00000406516 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
LIMK2-204ENST00000406516 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
LIMK2-204ENST00000406516 LINS1Q8NG48 757 aa18.21■□□□□ 0.51
LIMK2-204ENST00000406516 CCDC8Q9H0W5 538 aaPredicted RBP18.21■□□□□ 0.51
LIMK2-204ENST00000406516 PDRG1Q9NUG6 133 aa18.21■□□□□ 0.51
LIMK2-204ENST00000406516 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
LIMK2-204ENST00000406516 LRP10Q7Z4F1 713 aa18.2■□□□□ 0.5
LIMK2-204ENST00000406516 EVI5LQ96CN4 794 aa18.2■□□□□ 0.5
LIMK2-204ENST00000406516 KAZALD1Q96I82 304 aa18.2■□□□□ 0.5
LIMK2-204ENST00000406516 SIL1Q9H173 461 aa18.2■□□□□ 0.5
LIMK2-204ENST00000406516 STK32BQ9NY57 414 aa18.2■□□□□ 0.5
LIMK2-204ENST00000406516 HDAC5Q9UQL6 1122 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms