RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 EFCAB13Q8IY85 973 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 CCDC150Q8NCX0 1101 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 TDRD7Q8NHU6 1098 aaKnown RBP16.25■□□□□ 0.19
DUSP28-202ENST00000405954 GOLGA1Q92805 767 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 FRMD3A2A2Y4 597 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 EFCAB8A8MWE9 144 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 RHOXF2BP0C7M4 288 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 RHOXF2Q9BQY4 288 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 LRRCC1Q9C099 1032 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 NPHP3Q7Z494 1330 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 NYAP1Q6ZVC0 841 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 MROH1Q8NDA8 1641 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 ZSCAN12O43309 604 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 TMEM87AQ8NBN3 555 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 CDK19Q9BWU1 502 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 BICC1Q9H694 974 aaKnown RBP16.24■□□□□ 0.19
DUSP28-202ENST00000405954 CCDC196A0A1B0GTZ2 297 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 SHTN1A0MZ66 631 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 MPHOSPH10O00566 681 aaKnown RBP16.24■□□□□ 0.19
DUSP28-202ENST00000405954 HDXQ7Z353 690 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 CNNM3Q8NE01 707 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 FUCA2Q9BTY2 467 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 CARD10Q9BWT7 1032 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 MIS18AQ9NYP9 233 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 GPR161Q8N6U8 529 aaKnown RBP16.24■□□□□ 0.19
DUSP28-202ENST00000405954 ANKRD44Q8N8A2 993 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 TCEANC2Q96MN5 208 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 PARD6BQ9BYG5 372 aa16.24■□□□□ 0.19
DUSP28-202ENST00000405954 CAVIN2O95810 425 aa16.23■□□□□ 0.19
DUSP28-202ENST00000405954 NME9Q86XW9 330 aa16.23■□□□□ 0.19
DUSP28-202ENST00000405954 MRPL50Q8N5N7 158 aaKnown RBP16.23■□□□□ 0.19
DUSP28-202ENST00000405954 SSR1P43307 286 aaKnown RBP16.23■□□□□ 0.19
DUSP28-202ENST00000405954 MEIS3Q99687 375 aa16.23■□□□□ 0.19
DUSP28-202ENST00000405954 CLSTN2Q9H4D0 955 aa16.23■□□□□ 0.19
DUSP28-202ENST00000405954 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
DUSP28-202ENST00000405954 TULP4Q9NRJ4 1543 aa16.23■□□□□ 0.19
DUSP28-202ENST00000405954 A0A087WUV0 522 aaPredicted RBP16.22■□□□□ 0.19
DUSP28-202ENST00000405954 MTMR6Q9Y217 621 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 ATP8B1O43520 1251 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 CHMLP26374 656 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 AKAP17AQ02040 695 aaKnown RBP16.22■□□□□ 0.19
DUSP28-202ENST00000405954 WWC2Q6AWC2 1192 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 PRPF40BQ6NWY9 871 aaKnown RBP16.22■□□□□ 0.19
DUSP28-202ENST00000405954 NUTM1Q86Y26 1132 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 MRFAP1L1Q96HT8 127 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 RIMBP3CA6NJZ7 1639 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 RIMBP3BA6NNM3 1639 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 RIMBP3Q9UFD9 1639 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 EFCAB6Q5THR3 1501 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 LMOD1P29536 600 aaPredicted RBP16.22■□□□□ 0.19
DUSP28-202ENST00000405954 INPP5BP32019 993 aa16.22■□□□□ 0.19
DUSP28-202ENST00000405954 RNF187Q5TA31 235 aaPredicted RBP16.22■□□□□ 0.19
DUSP28-202ENST00000405954 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
DUSP28-202ENST00000405954 EIF5P55010 431 aaKnown RBP16.21■□□□□ 0.19
DUSP28-202ENST00000405954 ATP2B2Q01814 1243 aa16.21■□□□□ 0.19
DUSP28-202ENST00000405954 KARSQ15046 597 aaKnown RBP16.21■□□□□ 0.19
DUSP28-202ENST00000405954 FBXW10Q5XX13 1052 aa16.21■□□□□ 0.19
DUSP28-202ENST00000405954 NOC3LQ8WTT2 800 aaKnown RBP16.21■□□□□ 0.19
DUSP28-202ENST00000405954 ZNF428Q96B54 188 aa16.21■□□□□ 0.19
DUSP28-202ENST00000405954 SASH3O75995 380 aa16.21■□□□□ 0.19
DUSP28-202ENST00000405954 KIF4BQ2VIQ3 1234 aa16.21■□□□□ 0.19
DUSP28-202ENST00000405954 ERC1Q8IUD2 1116 aa16.21■□□□□ 0.19
DUSP28-202ENST00000405954 NECTIN2Q92692 538 aa16.21■□□□□ 0.19
DUSP28-202ENST00000405954 C11orf57Q6ZUT1 292 aaPredicted RBP16.21■□□□□ 0.18
DUSP28-202ENST00000405954 CDC37L1Q7L3B6 337 aa16.21■□□□□ 0.18
DUSP28-202ENST00000405954 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.18
DUSP28-202ENST00000405954 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 VAMP4O75379 141 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 CCT5P48643 541 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 NAA25Q14CX7 972 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 MYOM2P54296 1465 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 HSP90AA4PQ58FG1 418 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 CCAR1Q8IX12 1150 aaKnown RBP16.2■□□□□ 0.18
DUSP28-202ENST00000405954 CALR3Q96L12 384 aaKnown RBP16.2■□□□□ 0.18
DUSP28-202ENST00000405954 ESF1Q9H501 851 aaKnown RBP16.2■□□□□ 0.18
DUSP28-202ENST00000405954 WDHD1O75717 1129 aaPredicted RBP16.2■□□□□ 0.18
DUSP28-202ENST00000405954 SCP2P22307 547 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 PDE6BP35913 854 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 N4BP2L2Q92802 583 aaPredicted RBP16.2■□□□□ 0.18
DUSP28-202ENST00000405954 ZSCAN31Q96LW9 406 aaPredicted RBP16.2■□□□□ 0.18
DUSP28-202ENST00000405954 FAM204AQ9H8W3 233 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 CAPN7Q9Y6W3 813 aa16.2■□□□□ 0.18
DUSP28-202ENST00000405954 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
DUSP28-202ENST00000405954 CRACR2AQ9BSW2 395 aa16.19■□□□□ 0.18
DUSP28-202ENST00000405954 RBM28Q9NW13 759 aaKnown RBP16.19■□□□□ 0.18
DUSP28-202ENST00000405954 PPFIA3O75145 1194 aa16.19■□□□□ 0.18
DUSP28-202ENST00000405954 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
DUSP28-202ENST00000405954 CORO7P57737 925 aa16.19■□□□□ 0.18
DUSP28-202ENST00000405954 CCZ1BP86790 482 aa16.19■□□□□ 0.18
DUSP28-202ENST00000405954 CCZ1P86791 482 aaPredicted RBP16.19■□□□□ 0.18
DUSP28-202ENST00000405954 NFATC2IPQ8NCF5 419 aa16.19■□□□□ 0.18
DUSP28-202ENST00000405954 ARHGAP45Q92619 1136 aa16.19■□□□□ 0.18
DUSP28-202ENST00000405954 XPO4Q9C0E2 1151 aaKnown RBP16.19■□□□□ 0.18
DUSP28-202ENST00000405954 SSBP05455 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
DUSP28-202ENST00000405954 PEX19P40855 299 aa16.18■□□□□ 0.18
DUSP28-202ENST00000405954 SIL1Q9H173 461 aa16.18■□□□□ 0.18
DUSP28-202ENST00000405954 VEZTQ9HBM0 779 aa16.18■□□□□ 0.18
DUSP28-202ENST00000405954 INO80Q9ULG1 1556 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms