RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 SUSD4Q5VX71 490 aa17.08■□□□□ 0.33
PRAME-205ENST00000405655 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.33
PRAME-205ENST00000405655 FNBP4Q8N3X1 1017 aaPredicted RBP17.08■□□□□ 0.33
PRAME-205ENST00000405655 SEC62Q99442 399 aaKnown RBP17.08■□□□□ 0.33
PRAME-205ENST00000405655 FSD1Q9BTV5 496 aa17.08■□□□□ 0.33
PRAME-205ENST00000405655 EYA2O00167 538 aa17.08■□□□□ 0.32
PRAME-205ENST00000405655 IRS4O14654 1257 aaPredicted RBP17.08■□□□□ 0.32
PRAME-205ENST00000405655 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.32
PRAME-205ENST00000405655 DDIT3P35638 169 aa17.08■□□□□ 0.32
PRAME-205ENST00000405655 IL6STP40189 918 aaPredicted RBP17.08■□□□□ 0.32
PRAME-205ENST00000405655 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.32
PRAME-205ENST00000405655 AMIGO3Q86WK7 504 aa17.08■□□□□ 0.32
PRAME-205ENST00000405655 ZGPATQ8N5A5 531 aaKnown RBP17.08■□□□□ 0.32
PRAME-205ENST00000405655 TAF6LQ9Y6J9 622 aa17.08■□□□□ 0.32
PRAME-205ENST00000405655 SNAP23O00161 211 aa17.07■□□□□ 0.32
PRAME-205ENST00000405655 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
PRAME-205ENST00000405655 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
PRAME-205ENST00000405655 ZNF589Q86UQ0 364 aaPredicted RBP17.07■□□□□ 0.32
PRAME-205ENST00000405655 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
PRAME-205ENST00000405655 CCDC57Q2TAC2 916 aa17.06■□□□□ 0.32
PRAME-205ENST00000405655 EVI5LQ96CN4 794 aa17.06■□□□□ 0.32
PRAME-205ENST00000405655 SNRKQ9NRH2 765 aa17.06■□□□□ 0.32
PRAME-205ENST00000405655 PKP1Q13835 747 aa17.06■□□□□ 0.32
PRAME-205ENST00000405655 TAF1P21675 1872 aa17.05■□□□□ 0.32
PRAME-205ENST00000405655 CAMTA2O94983 1202 aa17.05■□□□□ 0.32
PRAME-205ENST00000405655 ITGA6P23229 1130 aa17.05■□□□□ 0.32
PRAME-205ENST00000405655 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
PRAME-205ENST00000405655 ZNF34Q8IZ26 560 aa17.05■□□□□ 0.32
PRAME-205ENST00000405655 HELBQ8NG08 1087 aaPredicted RBP17.05■□□□□ 0.32
PRAME-205ENST00000405655 SNX14Q9Y5W7 946 aa17.05■□□□□ 0.32
PRAME-205ENST00000405655 MYH3P11055 1940 aa17.05■□□□□ 0.32
PRAME-205ENST00000405655 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
PRAME-205ENST00000405655 CSF1RP07333 972 aa17.05■□□□□ 0.32
PRAME-205ENST00000405655 PI16Q6UXB8 463 aa17.05■□□□□ 0.32
PRAME-205ENST00000405655 COL4A1P02462 1669 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 HSPA4P34932 840 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 AFF2P51816 1311 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 ADCK5Q3MIX3 580 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 PRPF40BQ6NWY9 871 aaKnown RBP17.04■□□□□ 0.32
PRAME-205ENST00000405655 BICDL1Q6ZP65 573 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 CCDC24Q8N4L8 307 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 RAD50Q92878 1312 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 CHAMP1Q96JM3 812 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 GOLIM4O00461 696 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 ATP5JP18859 108 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 DEKP35659 375 aaKnown RBP17.04■□□□□ 0.32
PRAME-205ENST00000405655 IL15P40933 162 aaPredicted RBP17.04■□□□□ 0.32
PRAME-205ENST00000405655 SCARF1Q14162 830 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 TAF7LQ5H9L4 462 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 SEC31BQ9NQW1 1179 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
PRAME-205ENST00000405655 CTSWP56202 376 aa17.03■□□□□ 0.32
PRAME-205ENST00000405655 IFIT5Q13325 482 aaKnown RBP17.03■□□□□ 0.32
PRAME-205ENST00000405655 BTAF1O14981 1849 aa17.02■□□□□ 0.32
PRAME-205ENST00000405655 SSFA2P28290 1259 aa17.02■□□□□ 0.32
PRAME-205ENST00000405655 NIP7Q9Y221 180 aaKnown RBP eCLIP17.02■□□□□ 0.32
PRAME-205ENST00000405655 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.31
PRAME-205ENST00000405655 SRP68Q9UHB9 627 aaKnown RBP17.02■□□□□ 0.31
PRAME-205ENST00000405655 SPEF2Q9C093 1822 aa17.01■□□□□ 0.31
PRAME-205ENST00000405655 FOXD4L5Q5VV16 416 aaPredicted RBP17.01■□□□□ 0.31
PRAME-205ENST00000405655 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
PRAME-205ENST00000405655 FOXD4L4Q8WXT5 416 aaPredicted RBP17.01■□□□□ 0.31
PRAME-205ENST00000405655 TNPO1Q92973 898 aaKnown RBP17.01■□□□□ 0.31
PRAME-205ENST00000405655 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
PRAME-205ENST00000405655 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
PRAME-205ENST00000405655 ZNF609O15014 1411 aa17.01■□□□□ 0.31
PRAME-205ENST00000405655 WTIPA6NIX2 430 aaPredicted RBP17.01■□□□□ 0.31
PRAME-205ENST00000405655 ERVV-1B6SEH8 477 aa17.01■□□□□ 0.31
PRAME-205ENST00000405655 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
PRAME-205ENST00000405655 LDHAL6AQ6ZMR3 332 aa17.01■□□□□ 0.31
PRAME-205ENST00000405655 GJD4Q96KN9 370 aaPredicted RBP17.01■□□□□ 0.31
PRAME-205ENST00000405655 PLA2G12BQ9BX93 195 aa17.01■□□□□ 0.31
PRAME-205ENST00000405655 CEP126Q9P2H0 1117 aa17.01■□□□□ 0.31
PRAME-205ENST00000405655 MYO5AQ9Y4I1 1855 aaKnown RBP17.01■□□□□ 0.31
PRAME-205ENST00000405655 A0A0G2JLW4 131 aa17■□□□□ 0.31
PRAME-205ENST00000405655 MCCP23508 829 aa17■□□□□ 0.31
PRAME-205ENST00000405655 XAGE2Q96GT9 111 aa17■□□□□ 0.31
PRAME-205ENST00000405655 TMX3Q96JJ7 454 aa17■□□□□ 0.31
PRAME-205ENST00000405655 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
PRAME-205ENST00000405655 HAUS7Q99871 368 aa17■□□□□ 0.31
PRAME-205ENST00000405655 RIC1Q4ADV7 1423 aa17■□□□□ 0.31
PRAME-205ENST00000405655 ST18O60284 1047 aa16.99■□□□□ 0.31
PRAME-205ENST00000405655 RIPOR2Q9Y4F9 1068 aa16.99■□□□□ 0.31
PRAME-205ENST00000405655 RBM8AQ9Y5S9 174 aaKnown RBP16.99■□□□□ 0.31
PRAME-205ENST00000405655 CCDC171Q6TFL3 1326 aa16.99■□□□□ 0.31
PRAME-205ENST00000405655 CDHR2Q9BYE9 1310 aa16.99■□□□□ 0.31
PRAME-205ENST00000405655 TAF5LO75529 589 aa16.99■□□□□ 0.31
PRAME-205ENST00000405655 FKBP4Q02790 459 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRAME-205ENST00000405655 METTL24Q5JXM2 366 aa16.99■□□□□ 0.31
PRAME-205ENST00000405655 CNNM1Q9NRU3 951 aa16.99■□□□□ 0.31
PRAME-205ENST00000405655 SPATA31A6Q5VVP1 1343 aa16.98■□□□□ 0.31
PRAME-205ENST00000405655 PDE8AO60658 829 aa16.98■□□□□ 0.31
PRAME-205ENST00000405655 CIAO1O76071 339 aa16.98■□□□□ 0.31
PRAME-205ENST00000405655 VPS53Q5VIR6 699 aa16.98■□□□□ 0.31
PRAME-205ENST00000405655 SLC51AQ86UW1 340 aa16.98■□□□□ 0.31
PRAME-205ENST00000405655 DDX60Q8IY21 1712 aaKnown RBP16.98■□□□□ 0.31
PRAME-205ENST00000405655 RREB1Q92766 1687 aa16.97■□□□□ 0.31
PRAME-205ENST00000405655 ANKRD18BA2A2Z9 1011 aa16.97■□□□□ 0.31
PRAME-205ENST00000405655 IFIT1P09914 478 aaKnown RBP16.97■□□□□ 0.31
PRAME-205ENST00000405655 CASTP20810 708 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms