RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 NBPF15Q8N660 670 aa13.47□□□□□ -0.25
RPAIN-204ENST00000405578 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
RPAIN-204ENST00000405578 TLL2Q9Y6L7 1015 aa13.47□□□□□ -0.25
RPAIN-204ENST00000405578 DDX58O95786 925 aaKnown RBP13.46□□□□□ -0.25
RPAIN-204ENST00000405578 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
RPAIN-204ENST00000405578 MAP2K2P36507 400 aa13.46□□□□□ -0.25
RPAIN-204ENST00000405578 SNED1Q8TER0 1413 aa13.46□□□□□ -0.26
RPAIN-204ENST00000405578 RGL2O15211 777 aa13.45□□□□□ -0.26
RPAIN-204ENST00000405578 CA12O43570 354 aa13.45□□□□□ -0.26
RPAIN-204ENST00000405578 EPS15P42566 896 aa13.45□□□□□ -0.26
RPAIN-204ENST00000405578 EIF6P56537 245 aaKnown RBP13.45□□□□□ -0.26
RPAIN-204ENST00000405578 AIMP1Q12904 312 aaKnown RBP13.45□□□□□ -0.26
RPAIN-204ENST00000405578 PDIA6Q15084 440 aa13.45□□□□□ -0.26
RPAIN-204ENST00000405578 ALDH1L2Q3SY69 923 aa13.45□□□□□ -0.26
RPAIN-204ENST00000405578 JDP2Q8WYK2 163 aa13.45□□□□□ -0.26
RPAIN-204ENST00000405578 ERVV-1B6SEH8 477 aa13.44□□□□□ -0.26
RPAIN-204ENST00000405578 TCERG1O14776 1098 aaKnown RBP13.44□□□□□ -0.26
RPAIN-204ENST00000405578 ANXA1P04083 346 aa13.44□□□□□ -0.26
RPAIN-204ENST00000405578 SCNN1DP51172 638 aa13.44□□□□□ -0.26
RPAIN-204ENST00000405578 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
RPAIN-204ENST00000405578 COPS6Q7L5N1 327 aa13.44□□□□□ -0.26
RPAIN-204ENST00000405578 XAGE3Q8WTP9 111 aa13.44□□□□□ -0.26
RPAIN-204ENST00000405578 AKAP11Q9UKA4 1901 aa13.43□□□□□ -0.26
RPAIN-204ENST00000405578 KLRG2A4D1S0 409 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-204ENST00000405578 SOX10P56693 466 aa13.43□□□□□ -0.26
RPAIN-204ENST00000405578 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
RPAIN-204ENST00000405578 SMC4Q9NTJ3 1288 aa13.43□□□□□ -0.26
RPAIN-204ENST00000405578 MAP3K15Q6ZN16 1313 aa13.42□□□□□ -0.26
RPAIN-204ENST00000405578 FAM177BA6PVY3 158 aa13.42□□□□□ -0.26
RPAIN-204ENST00000405578 BRPF1P55201 1214 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-204ENST00000405578 HSP90AB3PQ58FF7 597 aa13.42□□□□□ -0.26
RPAIN-204ENST00000405578 CIAPIN1Q6FI81 312 aa13.42□□□□□ -0.26
RPAIN-204ENST00000405578 TTLL7Q6ZT98 887 aa13.42□□□□□ -0.26
RPAIN-204ENST00000405578 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
RPAIN-204ENST00000405578 USP50Q70EL3 339 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-204ENST00000405578 RIC3Q7Z5B4 369 aa13.42□□□□□ -0.26
RPAIN-204ENST00000405578 SAPCD2Q86UD0 394 aa13.42□□□□□ -0.26
RPAIN-204ENST00000405578 PSMD1Q99460 953 aa13.42□□□□□ -0.26
RPAIN-204ENST00000405578 NUP98P52948 1817 aa13.41□□□□□ -0.26
RPAIN-204ENST00000405578 CELF2O95319 508 aaKnown RBP13.41□□□□□ -0.26
RPAIN-204ENST00000405578 FLIIQ13045 1269 aa13.41□□□□□ -0.26
RPAIN-204ENST00000405578 FKBP5Q13451 457 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-204ENST00000405578 LRP10Q7Z4F1 713 aa13.41□□□□□ -0.26
RPAIN-204ENST00000405578 PLBD2Q8NHP8 589 aa13.41□□□□□ -0.26
RPAIN-204ENST00000405578 SSH1Q8WYL5 1049 aa13.41□□□□□ -0.26
RPAIN-204ENST00000405578 ZBTB3Q9H5J0 574 aa13.41□□□□□ -0.26
RPAIN-204ENST00000405578 PHAXQ9H814 394 aaKnown RBP13.41□□□□□ -0.26
RPAIN-204ENST00000405578 ALDH1B1P30837 517 aa13.4□□□□□ -0.26
RPAIN-204ENST00000405578 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
RPAIN-204ENST00000405578 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
RPAIN-204ENST00000405578 TPTE2Q6XPS3 522 aa13.4□□□□□ -0.26
RPAIN-204ENST00000405578 LARGE2Q8N3Y3 721 aa13.4□□□□□ -0.26
RPAIN-204ENST00000405578 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
RPAIN-204ENST00000405578 LAMB4A4D0S4 1761 aa13.4□□□□□ -0.26
RPAIN-204ENST00000405578 KIF16BQ96L93 1317 aa13.39□□□□□ -0.27
RPAIN-204ENST00000405578 IPO8O15397 1037 aaKnown RBP13.39□□□□□ -0.27
RPAIN-204ENST00000405578 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
RPAIN-204ENST00000405578 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
RPAIN-204ENST00000405578 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
RPAIN-204ENST00000405578 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
RPAIN-204ENST00000405578 BCL2L13Q9BXK5 485 aa13.39□□□□□ -0.27
RPAIN-204ENST00000405578 ZNF408Q9H9D4 720 aa13.39□□□□□ -0.27
RPAIN-204ENST00000405578 ABCC12Q96J65 1359 aa13.39□□□□□ -0.27
RPAIN-204ENST00000405578 PTPRCP08575 1304 aa13.39□□□□□ -0.27
RPAIN-204ENST00000405578 POLR2AP24928 1970 aaKnown RBP13.38□□□□□ -0.27
RPAIN-204ENST00000405578 PI4KAP2A4QPH2 592 aa13.38□□□□□ -0.27
RPAIN-204ENST00000405578 PI4KAP1Q8N8J0 262 aa13.38□□□□□ -0.27
RPAIN-204ENST00000405578 HHIPL1Q96JK4 782 aa13.38□□□□□ -0.27
RPAIN-204ENST00000405578 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-204ENST00000405578 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
RPAIN-204ENST00000405578 HLFQ16534 295 aa13.37□□□□□ -0.27
RPAIN-204ENST00000405578 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
RPAIN-204ENST00000405578 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
RPAIN-204ENST00000405578 G2E3Q7L622 706 aa13.37□□□□□ -0.27
RPAIN-204ENST00000405578 SLC51AQ86UW1 340 aa13.37□□□□□ -0.27
RPAIN-204ENST00000405578 NIM1KQ8IY84 436 aa13.37□□□□□ -0.27
RPAIN-204ENST00000405578 ZIC5Q96T25 663 aa13.37□□□□□ -0.27
RPAIN-204ENST00000405578 RCAN3Q9UKA8 241 aa13.37□□□□□ -0.27
RPAIN-204ENST00000405578 MAP3K2Q9Y2U5 619 aa13.37□□□□□ -0.27
RPAIN-204ENST00000405578 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-204ENST00000405578 TCIRG1Q13488 830 aa13.36□□□□□ -0.27
RPAIN-204ENST00000405578 DNAAF4Q8WXU2 420 aa13.36□□□□□ -0.27
RPAIN-204ENST00000405578 API5Q9BZZ5 524 aaKnown RBP13.36□□□□□ -0.27
RPAIN-204ENST00000405578 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
RPAIN-204ENST00000405578 GPRC5DQ9NZD1 345 aa13.36□□□□□ -0.27
RPAIN-204ENST00000405578 GPTP24298 496 aa13.35□□□□□ -0.27
RPAIN-204ENST00000405578 NOGQ13253 232 aa13.35□□□□□ -0.27
RPAIN-204ENST00000405578 CRY2Q49AN0 593 aa13.35□□□□□ -0.27
RPAIN-204ENST00000405578 PPP1R42Q7Z4L9 355 aa13.35□□□□□ -0.27
RPAIN-204ENST00000405578 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-204ENST00000405578 ARHGAP45Q92619 1136 aa13.35□□□□□ -0.27
RPAIN-204ENST00000405578 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-204ENST00000405578 MYD88Q99836 296 aa13.35□□□□□ -0.27
RPAIN-204ENST00000405578 METTL22Q9BUU2 404 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-204ENST00000405578 NOB1Q9ULX3 412 aaKnown RBP13.35□□□□□ -0.27
RPAIN-204ENST00000405578 RIC1Q4ADV7 1423 aa13.35□□□□□ -0.27
RPAIN-204ENST00000405578 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
RPAIN-204ENST00000405578 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
RPAIN-204ENST00000405578 ZNF34Q8IZ26 560 aa13.34□□□□□ -0.27
RPAIN-204ENST00000405578 RPGRQ92834 1020 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms