RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 ZNF444Q8N0Y2 327 aaPredicted RBP15.31■□□□□ 0.04
SNED1-205ENST00000405547 IFI16Q16666 785 aaKnown RBP15.31■□□□□ 0.04
SNED1-205ENST00000405547 RNF187Q5TA31 235 aaPredicted RBP15.31■□□□□ 0.04
SNED1-205ENST00000405547 TMTC2Q8N394 836 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 TRIM21P19474 475 aaKnown RBP15.31■□□□□ 0.04
SNED1-205ENST00000405547 SMC1AQ14683 1233 aaKnown RBP15.31■□□□□ 0.04
SNED1-205ENST00000405547 SYCP2Q9BX26 1530 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 TNIP1Q15025 636 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 CEP112Q8N8E3 955 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 DNAI1Q9UI46 699 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
SNED1-205ENST00000405547 MCMDC2Q4G0Z9 681 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 ZFYVE9O95405 1425 aa15.31■□□□□ 0.04
SNED1-205ENST00000405547 TUBBP07437 444 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 RLBP1P12271 317 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 SPAG1Q07617 926 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 PLEKHM2Q8IWE5 1019 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 SYT1P21579 422 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 SSR1P43307 286 aaKnown RBP15.3■□□□□ 0.04
SNED1-205ENST00000405547 CETN1Q12798 172 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 DZIP1Q86YF9 867 aaKnown RBP15.3■□□□□ 0.04
SNED1-205ENST00000405547 ATL3Q6DD88 541 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 COL17A1Q9UMD9 1497 aaPredicted RBP15.3■□□□□ 0.04
SNED1-205ENST00000405547 GSTTP1A0A1W2PQM5 241 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 ZSCAN29Q8IWY8 852 aaPredicted RBP15.3■□□□□ 0.04
SNED1-205ENST00000405547 TMX1Q9H3N1 280 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 USHBP1Q8N6Y0 703 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 BRF1Q92994 677 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 HSF2BPO75031 334 aa15.3■□□□□ 0.04
SNED1-205ENST00000405547 CYLC1P35663 651 aaPredicted RBP15.3■□□□□ 0.04
SNED1-205ENST00000405547 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
SNED1-205ENST00000405547 SEC24BO95487 1268 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNED1-205ENST00000405547 SLC26A6Q9BXS9 759 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 DNAJC25Q9H1X3 360 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 INSRP06213 1382 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 GRM8O00222 908 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 SPECC1LQ69YQ0 1117 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 USP26Q9BXU7 913 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
SNED1-205ENST00000405547 LRRC27Q9C0I9 530 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 UHRF1BP1Q6BDS2 1440 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 AOPEPQ8N6M6 819 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 ANKRD24Q8TF21 1146 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 GOLGA1Q92805 767 aa15.29■□□□□ 0.04
SNED1-205ENST00000405547 ZBTB43O43298 467 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 MCM6Q14566 821 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 TESK2Q96S53 571 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 CTAGE15A4D2H0 777 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 NBPF7P0C2Y1 421 aaPredicted RBP15.28■□□□□ 0.04
SNED1-205ENST00000405547 CTAGE8P0CG41 777 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 CEP85Q6P2H3 762 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 CTAGE6Q86UF2 777 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 CTAGE4Q8IX94 777 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 GIGYF2Q6Y7W6 1299 aaKnown RBP15.28■□□□□ 0.04
SNED1-205ENST00000405547 TRERF1Q96PN7 1200 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 ZSWIM4Q9H7M6 989 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 RTL1A6NKG5 1358 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 PDE4BQ07343 736 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 Q6ZUG5 572 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 ALG1Q9BT22 464 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 KRT23Q9C075 422 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 HAND2P61296 217 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 CNNM2Q9H8M5 875 aa15.28■□□□□ 0.04
SNED1-205ENST00000405547 SHANK2Q9UPX8 1470 aa15.27■□□□□ 0.04
SNED1-205ENST00000405547 KLF18A0A0U1RQI7 1052 aa15.27■□□□□ 0.04
SNED1-205ENST00000405547 CCDC144CPQ8IYA2 1237 aa15.27■□□□□ 0.04
SNED1-205ENST00000405547 C8orf58Q8NAV2 365 aa15.27■□□□□ 0.04
SNED1-205ENST00000405547 LDHAL6AQ6ZMR3 332 aa15.27■□□□□ 0.04
SNED1-205ENST00000405547 SLF2Q8IX21 1173 aa15.27■□□□□ 0.04
SNED1-205ENST00000405547 TEX13AQ9BXU3 409 aaPredicted RBP15.27■□□□□ 0.04
SNED1-205ENST00000405547 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.04
SNED1-205ENST00000405547 VAMP4O75379 141 aa15.27■□□□□ 0.04
SNED1-205ENST00000405547 BBXQ8WY36 941 aaPredicted RBP15.27■□□□□ 0.04
SNED1-205ENST00000405547 TRMT112Q9UI30 125 aaKnown RBP15.27■□□□□ 0.03
SNED1-205ENST00000405547 NPC1L1Q9UHC9 1359 aa15.27■□□□□ 0.03
SNED1-205ENST00000405547 RNF123Q5XPI4 1314 aa15.27■□□□□ 0.03
SNED1-205ENST00000405547 MPHOSPH10O00566 681 aaKnown RBP15.27■□□□□ 0.03
SNED1-205ENST00000405547 MATR3P43243 847 aaKnown RBP eCLIP15.27■□□□□ 0.03
SNED1-205ENST00000405547 C16orf71Q8IYS4 520 aaPredicted RBP15.27■□□□□ 0.03
SNED1-205ENST00000405547 ALDH1L1O75891 902 aa15.27■□□□□ 0.03
SNED1-205ENST00000405547 NOP2P46087 812 aaKnown RBP15.27■□□□□ 0.03
SNED1-205ENST00000405547 AK2P54819 239 aa15.27■□□□□ 0.03
SNED1-205ENST00000405547 ANKRD13DQ6ZTN6 518 aa15.27■□□□□ 0.03
SNED1-205ENST00000405547 DNA2P51530 1060 aa15.26■□□□□ 0.03
SNED1-205ENST00000405547 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
SNED1-205ENST00000405547 TERF1P54274 439 aa15.26■□□□□ 0.03
SNED1-205ENST00000405547 AEBP2Q6ZN18 517 aaPredicted RBP15.26■□□□□ 0.03
SNED1-205ENST00000405547 ZGPATQ8N5A5 531 aaKnown RBP15.26■□□□□ 0.03
SNED1-205ENST00000405547 SOS1Q07889 1333 aaPredicted RBP15.26■□□□□ 0.03
SNED1-205ENST00000405547 TRIM47Q96LD4 638 aa15.26■□□□□ 0.03
SNED1-205ENST00000405547 DDX46Q7L014 1031 aaKnown RBP15.26■□□□□ 0.03
SNED1-205ENST00000405547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNED1-205ENST00000405547 TMCO5BA8MYB1 307 aa15.26■□□□□ 0.03
SNED1-205ENST00000405547 ZNF445P59923 1031 aa15.26■□□□□ 0.03
SNED1-205ENST00000405547 SPTLC2O15270 562 aa15.26■□□□□ 0.03
SNED1-205ENST00000405547 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
SNED1-205ENST00000405547 WTAPQ15007 396 aa15.26■□□□□ 0.03
SNED1-205ENST00000405547 EXOC1Q9NV70 894 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms