RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 RASSF7Q02833 373 aa18.46■□□□□ 0.55
CDPF1-203ENST00000404583 SLC51AQ86UW1 340 aa18.46■□□□□ 0.55
CDPF1-203ENST00000404583 FRAT1Q92837 279 aaPredicted RBP18.46■□□□□ 0.55
CDPF1-203ENST00000404583 CCDC85AQ96PX6 553 aaPredicted RBP18.46■□□□□ 0.55
CDPF1-203ENST00000404583 API5Q9BZZ5 524 aaKnown RBP18.46■□□□□ 0.55
CDPF1-203ENST00000404583 C9orf78Q9NZ63 289 aaPredicted RBP18.46■□□□□ 0.55
CDPF1-203ENST00000404583 GRM8O00222 908 aa18.45■□□□□ 0.54
CDPF1-203ENST00000404583 PPEF1O14829 653 aaPredicted RBP18.45■□□□□ 0.54
CDPF1-203ENST00000404583 ARHGAP45Q92619 1136 aa18.45■□□□□ 0.54
CDPF1-203ENST00000404583 NFKBIEO00221 500 aa18.44■□□□□ 0.54
CDPF1-203ENST00000404583 CTSWP56202 376 aa18.44■□□□□ 0.54
CDPF1-203ENST00000404583 GRAPQ13588 217 aa18.44■□□□□ 0.54
CDPF1-203ENST00000404583 CCDC152Q4G0S7 254 aa18.44■□□□□ 0.54
CDPF1-203ENST00000404583 CCDC93Q567U6 631 aa18.44■□□□□ 0.54
CDPF1-203ENST00000404583 SOGA3Q5TF21 947 aa18.44■□□□□ 0.54
CDPF1-203ENST00000404583 TTLL11Q8NHH1 800 aa18.44■□□□□ 0.54
CDPF1-203ENST00000404583 GRAPLQ8TC17 118 aaPredicted RBP18.44■□□□□ 0.54
CDPF1-203ENST00000404583 SEC31BQ9NQW1 1179 aa18.44■□□□□ 0.54
CDPF1-203ENST00000404583 IPO8O15397 1037 aaKnown RBP18.43■□□□□ 0.54
CDPF1-203ENST00000404583 BBOX1O75936 387 aa18.43■□□□□ 0.54
CDPF1-203ENST00000404583 CELF1Q92879 486 aaKnown RBP18.43■□□□□ 0.54
CDPF1-203ENST00000404583 PLA2G12BQ9BX93 195 aa18.43■□□□□ 0.54
CDPF1-203ENST00000404583 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
CDPF1-203ENST00000404583 COL4A1P02462 1669 aa18.43■□□□□ 0.54
CDPF1-203ENST00000404583 PRELPP51888 382 aa18.42■□□□□ 0.54
CDPF1-203ENST00000404583 GPBP1L1Q9HC44 474 aaPredicted RBP18.42■□□□□ 0.54
CDPF1-203ENST00000404583 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
CDPF1-203ENST00000404583 TRIM27P14373 513 aa18.41■□□□□ 0.54
CDPF1-203ENST00000404583 CCT4P50991 539 aaKnown RBP18.41■□□□□ 0.54
CDPF1-203ENST00000404583 ATF7IPQ6VMQ6 1270 aa18.41■□□□□ 0.54
CDPF1-203ENST00000404583 GREM2Q9H772 168 aa18.41■□□□□ 0.54
CDPF1-203ENST00000404583 ATP6V0A2Q9Y487 856 aa18.41■□□□□ 0.54
CDPF1-203ENST00000404583 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
CDPF1-203ENST00000404583 FOXO4P98177 505 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 EPHA10Q5JZY3 1008 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 C9orf131Q5VYM1 1079 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 RTKN2Q8IZC4 609 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 CLUAP1Q96AJ1 413 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 USP44Q9H0E7 712 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 UTYO14607 1347 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 CSF1RP07333 972 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 ZKSCAN2Q63HK3 967 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 CC2D2BQ6DHV5 1058 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 SP8Q8IXZ3 490 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 TAOK3Q9H2K8 898 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 RNF181Q9P0P0 153 aa18.4■□□□□ 0.54
CDPF1-203ENST00000404583 SNED1Q8TER0 1413 aa18.39■□□□□ 0.53
CDPF1-203ENST00000404583 FKBP4Q02790 459 aaKnown RBP eCLIP18.39■□□□□ 0.53
CDPF1-203ENST00000404583 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
CDPF1-203ENST00000404583 TMX4Q9H1E5 349 aaPredicted RBP18.39■□□□□ 0.53
CDPF1-203ENST00000404583 LTBP3Q9NS15 1303 aa18.38■□□□□ 0.53
CDPF1-203ENST00000404583 CEP350Q5VT06 3117 aa18.38■□□□□ 0.53
CDPF1-203ENST00000404583 LMNB1P20700 586 aa18.38■□□□□ 0.53
CDPF1-203ENST00000404583 FAM161AQ3B820 660 aa18.38■□□□□ 0.53
CDPF1-203ENST00000404583 INTS3Q68E01 1043 aaKnown RBP18.38■□□□□ 0.53
CDPF1-203ENST00000404583 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
CDPF1-203ENST00000404583 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
CDPF1-203ENST00000404583 SPEF2Q9C093 1822 aa18.37■□□□□ 0.53
CDPF1-203ENST00000404583 DICER1Q9UPY3 1922 aaKnown RBP18.37■□□□□ 0.53
CDPF1-203ENST00000404583 ITGA6P23229 1130 aa18.37■□□□□ 0.53
CDPF1-203ENST00000404583 LMBR1LQ6UX01 489 aa18.37■□□□□ 0.53
CDPF1-203ENST00000404583 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
CDPF1-203ENST00000404583 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
CDPF1-203ENST00000404583 RTL9Q8NET4 1388 aa18.37■□□□□ 0.53
CDPF1-203ENST00000404583 GRIPAP1Q4V328 841 aa18.36■□□□□ 0.53
CDPF1-203ENST00000404583 CDC5LQ99459 802 aaKnown RBP18.36■□□□□ 0.53
CDPF1-203ENST00000404583 ZNF277Q9NRM2 450 aaPredicted RBP18.36■□□□□ 0.53
CDPF1-203ENST00000404583 LRRC37AA6NMS7 1700 aa18.35■□□□□ 0.53
CDPF1-203ENST00000404583 MPNDQ8N594 471 aa18.35■□□□□ 0.53
CDPF1-203ENST00000404583 PSMD1Q99460 953 aa18.35■□□□□ 0.53
CDPF1-203ENST00000404583 BICC1Q9H694 974 aaKnown RBP18.35■□□□□ 0.53
CDPF1-203ENST00000404583 DPP8Q6V1X1 898 aaPredicted RBP18.34■□□□□ 0.53
CDPF1-203ENST00000404583 TMEM57Q8N5G2 664 aa18.34■□□□□ 0.53
CDPF1-203ENST00000404583 ANKRD18BA2A2Z9 1011 aa18.33■□□□□ 0.53
CDPF1-203ENST00000404583 UBTFL1P0CB47 393 aaPredicted RBP18.33■□□□□ 0.53
CDPF1-203ENST00000404583 GPSM2P81274 684 aa18.33■□□□□ 0.53
CDPF1-203ENST00000404583 IFIT5Q13325 482 aaKnown RBP18.33■□□□□ 0.53
CDPF1-203ENST00000404583 FTSJ3Q8IY81 847 aaKnown RBP18.33■□□□□ 0.53
CDPF1-203ENST00000404583 DZIP1LQ8IYY4 767 aaKnown RBP18.33■□□□□ 0.53
CDPF1-203ENST00000404583 MEIS3Q99687 375 aa18.33■□□□□ 0.53
CDPF1-203ENST00000404583 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.53
CDPF1-203ENST00000404583 RLBP1P12271 317 aa18.32■□□□□ 0.52
CDPF1-203ENST00000404583 IGHMBP2P38935 993 aaKnown RBP18.32■□□□□ 0.52
CDPF1-203ENST00000404583 IARSP41252 1262 aaKnown RBP18.32■□□□□ 0.52
CDPF1-203ENST00000404583 CCDC57Q2TAC2 916 aa18.32■□□□□ 0.52
CDPF1-203ENST00000404583 ANKRD44Q8N8A2 993 aa18.32■□□□□ 0.52
CDPF1-203ENST00000404583 BSDC1Q9NW68 430 aaPredicted RBP18.32■□□□□ 0.52
CDPF1-203ENST00000404583 TIAM2Q8IVF5 1701 aa18.32■□□□□ 0.52
CDPF1-203ENST00000404583 KIF3CO14782 793 aa18.32■□□□□ 0.52
CDPF1-203ENST00000404583 PLIN1O60240 522 aa18.32■□□□□ 0.52
CDPF1-203ENST00000404583 RABL6Q3YEC7 729 aaPredicted RBP18.32■□□□□ 0.52
CDPF1-203ENST00000404583 MPHOSPH8Q99549 860 aa18.32■□□□□ 0.52
CDPF1-203ENST00000404583 RTFDC1Q9BY42 306 aaPredicted RBP18.32■□□□□ 0.52
CDPF1-203ENST00000404583 ZNF594Q96JF6 807 aaPredicted RBP18.31■□□□□ 0.52
CDPF1-203ENST00000404583 MINPP1Q9UNW1 487 aa18.31■□□□□ 0.52
CDPF1-203ENST00000404583 SUPT20HQ8NEM7 779 aa18.3■□□□□ 0.52
CDPF1-203ENST00000404583 PANK1Q8TE04 598 aa18.3■□□□□ 0.52
CDPF1-203ENST00000404583 ANKIB1Q9P2G1 1089 aa18.3■□□□□ 0.52
CDPF1-203ENST00000404583 POLLQ9UGP5 575 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms