RNA–Protein interactions for RNA: ENST00000403946.7

OTOF-205, Transcript of otoferlin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene OTOF, Length 6,937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-205ENST00000403946 EPB41L2O43491 1005 aaKnown RBP12.62□□□□□ -0.39
OTOF-205ENST00000403946 IFIT3O14879 490 aaKnown RBP12.62□□□□□ -0.39
OTOF-205ENST00000403946 FLIIQ13045 1269 aa12.62□□□□□ -0.39
OTOF-205ENST00000403946 TTF1Q15361 905 aaPredicted RBP12.62□□□□□ -0.39
OTOF-205ENST00000403946 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
OTOF-205ENST00000403946 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
OTOF-205ENST00000403946 UPF3BQ9BZI7 483 aaKnown RBP12.62□□□□□ -0.39
OTOF-205ENST00000403946 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
OTOF-205ENST00000403946 SP4Q02446 784 aa12.62□□□□□ -0.39
OTOF-205ENST00000403946 CCDC144CPQ8IYA2 1237 aa12.62□□□□□ -0.39
OTOF-205ENST00000403946 STIM1Q13586 685 aa12.62□□□□□ -0.39
OTOF-205ENST00000403946 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
OTOF-205ENST00000403946 GPHNQ9NQX3 736 aaPredicted RBP12.62□□□□□ -0.39
OTOF-205ENST00000403946 NAA16Q6N069 864 aaPredicted RBP12.61□□□□□ -0.39
OTOF-205ENST00000403946 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
OTOF-205ENST00000403946 CATIPQ7Z7H3 387 aa12.61□□□□□ -0.39
OTOF-205ENST00000403946 SUPT20HQ8NEM7 779 aa12.61□□□□□ -0.39
OTOF-205ENST00000403946 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
OTOF-205ENST00000403946 DCPSQ96C86 337 aaKnown RBP12.61□□□□□ -0.39
OTOF-205ENST00000403946 RNF41Q9H4P4 317 aaPredicted RBP12.61□□□□□ -0.39
OTOF-205ENST00000403946 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
OTOF-205ENST00000403946 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
OTOF-205ENST00000403946 SLC12A7Q9Y666 1083 aa12.61□□□□□ -0.39
OTOF-205ENST00000403946 NLRP5P59047 1200 aa12.61□□□□□ -0.39
OTOF-205ENST00000403946 MAP3K11Q16584 847 aa12.61□□□□□ -0.39
OTOF-205ENST00000403946 JMYQ8N9B5 988 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 WASF1Q92558 559 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
OTOF-205ENST00000403946 ABCC10Q5T3U5 1492 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 CNGA1P29973 690 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 CPSF2Q9P2I0 782 aaKnown RBP12.6□□□□□ -0.39
OTOF-205ENST00000403946 GGA1Q9UJY5 639 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 TSPOAP1O95153 1857 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 C16orf45Q96MC5 204 aaPredicted RBP12.6□□□□□ -0.39
OTOF-205ENST00000403946 PTPN23Q9H3S7 1636 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 B4DLN1 442 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 MRPL12P52815 198 aaKnown RBP12.6□□□□□ -0.39
OTOF-205ENST00000403946 TAF12Q16514 161 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 GIGYF2Q6Y7W6 1299 aaKnown RBP12.6□□□□□ -0.39
OTOF-205ENST00000403946 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 ABCC2Q92887 1545 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 RAPGEF6Q8TEU7 1601 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 KIF5CO60282 957 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 ANKRD1Q15327 319 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 ANKRD2Q9GZV1 360 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 KIF21AQ7Z4S6 1674 aa12.6□□□□□ -0.39
OTOF-205ENST00000403946 BAG4O95429 457 aaKnown RBP12.59□□□□□ -0.39
OTOF-205ENST00000403946 HCLS1P14317 486 aaPredicted RBP12.59□□□□□ -0.39
OTOF-205ENST00000403946 ME1P48163 572 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 PAXBP1Q9Y5B6 917 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 THOC2Q8NI27 1593 aaKnown RBP12.59□□□□□ -0.39
OTOF-205ENST00000403946 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
OTOF-205ENST00000403946 BICD1Q96G01 975 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 PDRG1Q9NUG6 133 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 PDE6BP35913 854 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 HAND2P61296 217 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 SARNPP82979 210 aaKnown RBP12.59□□□□□ -0.39
OTOF-205ENST00000403946 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 CCDC175P0C221 793 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 CCDC183Q5T5S1 534 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 CCDC150Q8NCX0 1101 aa12.59□□□□□ -0.39
OTOF-205ENST00000403946 LDHBP07195 334 aaKnown RBP12.58□□□□□ -0.39
OTOF-205ENST00000403946 SMC1AQ14683 1233 aaKnown RBP12.58□□□□□ -0.39
OTOF-205ENST00000403946 ATP2B3Q16720 1220 aa12.58□□□□□ -0.39
OTOF-205ENST00000403946 TMEM94Q12767 1356 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 SPOUT1Q5T280 376 aaKnown RBP12.58□□□□□ -0.4
OTOF-205ENST00000403946 TAF4BQ92750 862 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 ALDH1B1P30837 517 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 CLIP2Q9UDT6 1046 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 SAP30BPQ9UHR5 308 aaKnown RBP12.58□□□□□ -0.4
OTOF-205ENST00000403946 SLC4A4Q9Y6R1 1079 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 CCDC194A0A1B0GVG4 234 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 LMBR1LQ6UX01 489 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 MICALL1Q8N3F8 863 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 CCDC113Q9H0I3 377 aa12.58□□□□□ -0.4
OTOF-205ENST00000403946 NEMFO60524 1076 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 HSPA4P34932 840 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 RSPH14Q9UHP6 348 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 NPATQ14207 1427 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 HOXC9P31274 260 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 RASSF4Q9H2L5 321 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
OTOF-205ENST00000403946 RAB11FIP3O75154 756 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 TMEM266Q2M3C6 531 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 MFSD6Q6ZSS7 791 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 RAB11FIP4Q86YS3 637 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 CSADQ9Y600 493 aa12.57□□□□□ -0.4
OTOF-205ENST00000403946 ZBTB7AO95365 584 aa12.56□□□□□ -0.4
OTOF-205ENST00000403946 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
OTOF-205ENST00000403946 CEP135Q66GS9 1140 aa12.56□□□□□ -0.4
OTOF-205ENST00000403946 PAIP2Q9BPZ3 127 aaKnown RBP12.56□□□□□ -0.4
OTOF-205ENST00000403946 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
OTOF-205ENST00000403946 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms