RNA–Protein interactions for RNA: ENST00000403821.6

R3HDM2-205, Transcript of R3H domain containing 2, humanhuman

TSL 5 BASIC

Gene R3HDM2, Length 3,347 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-205ENST00000403821 KCNQ3O43525 872 aa13.07□□□□□ -0.32
R3HDM2-205ENST00000403821 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
R3HDM2-205ENST00000403821 CTNNA3Q9UI47 895 aa13.07□□□□□ -0.32
R3HDM2-205ENST00000403821 CCDC171Q6TFL3 1326 aa13.07□□□□□ -0.32
R3HDM2-205ENST00000403821 PI4KAP2A4QPH2 592 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 BECN2A8MW95 431 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 FOSBP53539 338 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 ST3GAL1Q11201 340 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 PI4KAP1Q8N8J0 262 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 FBXW7Q969H0 707 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 H3BQV1 296 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 POLA2Q14181 598 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 AACSQ86V21 672 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 LEO1Q8WVC0 666 aaPredicted RBP13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 ERBB3P21860 1342 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 NR1I2O75469 434 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 FAM227BQ96M60 508 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 TM6SF1Q9BZW5 370 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 CLSTN2Q9H4D0 955 aa13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 C9orf78Q9NZ63 289 aaPredicted RBP13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 PA2G4Q9UQ80 394 aaKnown RBP13.06□□□□□ -0.32
R3HDM2-205ENST00000403821 PXDNQ92626 1479 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 PTPN14Q15678 1187 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 DCCP43146 1447 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 HSP90B1P14625 803 aaKnown RBP13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 DNAAF4Q8WXU2 420 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 STRN4Q9NRL3 753 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 TTC41PQ6P2S7 1318 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 PIP4K2BP78356 416 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 CCDC144BQ3MJ40 725 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 PRDM11Q9NQV5 511 aa13.05□□□□□ -0.32
R3HDM2-205ENST00000403821 ELP1O95163 1332 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 ARID5BQ14865 1188 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 TDRD7Q8NHU6 1098 aaKnown RBP13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 DDX11Q96FC9 970 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 PLA2G4DQ86XP0 818 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 EVI5LQ96CN4 794 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 CHPF2Q9P2E5 772 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 ALS2Q96Q42 1657 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 MAP3K5Q99683 1374 aa13.04□□□□□ -0.32
R3HDM2-205ENST00000403821 SKILP12757 684 aa13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 GABPB1Q06547 395 aaPredicted RBP13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 DDX41Q9UJV9 622 aaKnown RBP13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 ZNF215Q9UL58 517 aaPredicted RBP13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 KIF1AQ12756 1690 aa13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 SLIT3O75094 1523 aa13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 SLC27A2O14975 620 aa13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 NECTIN1Q15223 517 aa13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 CCDC8Q9H0W5 538 aaPredicted RBP13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 COL9A3Q14050 684 aaPredicted RBP13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 SYCP1Q15431 976 aa13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 KRT222Q8N1A0 295 aa13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
R3HDM2-205ENST00000403821 ERICH4A6NGS2 130 aa13.02□□□□□ -0.32
R3HDM2-205ENST00000403821 BOLA2Q9H3K6 86 aa13.02□□□□□ -0.32
R3HDM2-205ENST00000403821 USP27XA6NNY8 438 aa13.02□□□□□ -0.33
R3HDM2-205ENST00000403821 JAK2O60674 1132 aa13.02□□□□□ -0.33
R3HDM2-205ENST00000403821 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.33
R3HDM2-205ENST00000403821 KIF18AQ8NI77 898 aa13.02□□□□□ -0.33
R3HDM2-205ENST00000403821 NAP1L2Q9ULW6 460 aaPredicted RBP13.02□□□□□ -0.33
R3HDM2-205ENST00000403821 TAF3Q5VWG9 929 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 BRF1Q92994 677 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 USP54Q70EL1 1684 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 A0A087WWV3 80 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 PRAMEF22A3QJZ6 481 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 LRRC8AQ8IWT6 810 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 PGBD1Q96JS3 809 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 SIL1Q9H173 461 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 SOS2Q07890 1332 aaPredicted RBP13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 CCDC69A6NI79 296 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 CDK11BP21127 795 aaKnown RBP13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 ELF2Q15723 593 aa13.01□□□□□ -0.33
R3HDM2-205ENST00000403821 HIP1O00291 1037 aa13□□□□□ -0.33
R3HDM2-205ENST00000403821 G3BP1Q13283 466 aaKnown RBP eCLIP13□□□□□ -0.33
R3HDM2-205ENST00000403821 CCDC73Q6ZRK6 1079 aa13□□□□□ -0.33
R3HDM2-205ENST00000403821 ERC1Q8IUD2 1116 aa13□□□□□ -0.33
R3HDM2-205ENST00000403821 BBXQ8WY36 941 aaPredicted RBP13□□□□□ -0.33
R3HDM2-205ENST00000403821 RPS6KB1P23443 525 aa13□□□□□ -0.33
R3HDM2-205ENST00000403821 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
R3HDM2-205ENST00000403821 BEND3Q5T5X7 828 aa13□□□□□ -0.33
R3HDM2-205ENST00000403821 A0A0D9SFI3 127 aa13□□□□□ -0.33
R3HDM2-205ENST00000403821 SLC39A6Q13433 755 aa13□□□□□ -0.33
R3HDM2-205ENST00000403821 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
R3HDM2-205ENST00000403821 C11orf57Q6ZUT1 292 aaPredicted RBP13□□□□□ -0.33
R3HDM2-205ENST00000403821 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
R3HDM2-205ENST00000403821 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms