RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
PRAME-204ENST00000403441 TRPM7Q96QT4 1865 aa16.11■□□□□ 0.17
PRAME-204ENST00000403441 TRAF5O00463 557 aa16.1■□□□□ 0.17
PRAME-204ENST00000403441 HSPA8P11142 646 aaKnown RBP16.1■□□□□ 0.17
PRAME-204ENST00000403441 GMPSP49915 693 aaPredicted RBP16.1■□□□□ 0.17
PRAME-204ENST00000403441 CXCL9Q07325 125 aa16.1■□□□□ 0.17
PRAME-204ENST00000403441 KIAA2012Q0VF49 1180 aa16.1■□□□□ 0.17
PRAME-204ENST00000403441 GRM1Q13255 1194 aa16.1■□□□□ 0.17
PRAME-204ENST00000403441 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
PRAME-204ENST00000403441 GRAPQ13588 217 aa16.1■□□□□ 0.17
PRAME-204ENST00000403441 TNIP1Q15025 636 aa16.1■□□□□ 0.17
PRAME-204ENST00000403441 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
PRAME-204ENST00000403441 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
PRAME-204ENST00000403441 FMR1Q06787 632 aaKnown RBP eCLIP16.09■□□□□ 0.174e-26■□□□□ 9.3
PRAME-204ENST00000403441 NEUROD2Q15784 382 aa16.09■□□□□ 0.17
PRAME-204ENST00000403441 CIAPIN1Q6FI81 312 aa16.09■□□□□ 0.17
PRAME-204ENST00000403441 BCL2L13Q9BXK5 485 aa16.09■□□□□ 0.17
PRAME-204ENST00000403441 TLL2Q9Y6L7 1015 aa16.09■□□□□ 0.17
PRAME-204ENST00000403441 CST9Q5W186 159 aa16.08■□□□□ 0.16
PRAME-204ENST00000403441 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.16
PRAME-204ENST00000403441 GPR101Q96P66 508 aaPredicted RBP16.08■□□□□ 0.16
PRAME-204ENST00000403441 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
PRAME-204ENST00000403441 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.16
PRAME-204ENST00000403441 CHL1O00533 1208 aa16.07■□□□□ 0.16
PRAME-204ENST00000403441 RAD17O75943 681 aa16.07■□□□□ 0.16
PRAME-204ENST00000403441 WDR43Q15061 677 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRAME-204ENST00000403441 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
PRAME-204ENST00000403441 CCDC146Q8IYE0 955 aa16.07■□□□□ 0.16
PRAME-204ENST00000403441 LRRC37AA6NMS7 1700 aa16.06■□□□□ 0.16
PRAME-204ENST00000403441 CELF2O95319 508 aaKnown RBP16.06■□□□□ 0.16
PRAME-204ENST00000403441 HOXB7P09629 217 aa16.06■□□□□ 0.16
PRAME-204ENST00000403441 KRT24Q2M2I5 525 aa16.06■□□□□ 0.16
PRAME-204ENST00000403441 PLBD2Q8NHP8 589 aa16.06■□□□□ 0.16
PRAME-204ENST00000403441 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
PRAME-204ENST00000403441 DUOX1Q9NRD9 1551 aa16.05■□□□□ 0.16
PRAME-204ENST00000403441 MAP2K2P36507 400 aa16.05■□□□□ 0.16
PRAME-204ENST00000403441 SAPCD2Q86UD0 394 aa16.05■□□□□ 0.16
PRAME-204ENST00000403441 RUNDC1Q96C34 613 aa16.05■□□□□ 0.16
PRAME-204ENST00000403441 GLIS2Q9BZE0 524 aaPredicted RBP16.05■□□□□ 0.16
PRAME-204ENST00000403441 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
PRAME-204ENST00000403441 H7C1D1 291 aa16.04■□□□□ 0.16
PRAME-204ENST00000403441 ANKRD13DQ6ZTN6 518 aa16.04■□□□□ 0.16
PRAME-204ENST00000403441 ABHD8Q96I13 439 aa16.04■□□□□ 0.16
PRAME-204ENST00000403441 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
PRAME-204ENST00000403441 PGAP2Q9UHJ9 254 aa16.04■□□□□ 0.16
PRAME-204ENST00000403441 DDX60Q8IY21 1712 aaKnown RBP16.04■□□□□ 0.16
PRAME-204ENST00000403441 CA12O43570 354 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 WASHC4Q2M389 1173 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 CDC37L1Q7L3B6 337 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 MICALL2Q8IY33 904 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 TRPM4Q8TD43 1214 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 ZNF428Q96B54 188 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 FAM89AQ96GI7 184 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 HHIPL1Q96JK4 782 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 CNOT7Q9UIV1 285 aaKnown RBP16.03■□□□□ 0.16
PRAME-204ENST00000403441 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
PRAME-204ENST00000403441 TAF1P21675 1872 aa16.02■□□□□ 0.16
PRAME-204ENST00000403441 YDJCA8MPS7 323 aa16.02■□□□□ 0.16
PRAME-204ENST00000403441 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.16
PRAME-204ENST00000403441 NSFL1CQ9UNZ2 370 aaKnown RBP16.02■□□□□ 0.16
PRAME-204ENST00000403441 ATP5J2-PTCD1G3V325 749 aa16.01■□□□□ 0.15
PRAME-204ENST00000403441 C6orf229H3BNL8 230 aa16.01■□□□□ 0.15
PRAME-204ENST00000403441 AOC2O75106 756 aa16.01■□□□□ 0.15
PRAME-204ENST00000403441 HIRAP54198 1017 aaPredicted RBP16.01■□□□□ 0.15
PRAME-204ENST00000403441 SF3B3Q15393 1217 aaKnown RBP16.01■□□□□ 0.15
PRAME-204ENST00000403441 EYA3Q99504 573 aa16.01■□□□□ 0.15
PRAME-204ENST00000403441 HSP90B1P14625 803 aaKnown RBP16■□□□□ 0.15
PRAME-204ENST00000403441 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
PRAME-204ENST00000403441 GOLGA2Q08379 1002 aa16■□□□□ 0.15
PRAME-204ENST00000403441 DUSP27Q5VZP5 1158 aa16■□□□□ 0.15
PRAME-204ENST00000403441 DPF2Q92785 391 aa16■□□□□ 0.15
PRAME-204ENST00000403441 CELF1Q92879 486 aaKnown RBP16■□□□□ 0.15
PRAME-204ENST00000403441 CFAP44Q96MT7 982 aa16■□□□□ 0.15
PRAME-204ENST00000403441 DBNDD1Q9H9R9 158 aa16■□□□□ 0.15
PRAME-204ENST00000403441 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
PRAME-204ENST00000403441 SHTN1A0MZ66 631 aa15.99■□□□□ 0.15
PRAME-204ENST00000403441 PSMD14O00487 310 aa15.99■□□□□ 0.15
PRAME-204ENST00000403441 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
PRAME-204ENST00000403441 RIMBP2O15034 1052 aa15.99■□□□□ 0.15
PRAME-204ENST00000403441 RPS12P25398 132 aaKnown RBP15.99■□□□□ 0.15
PRAME-204ENST00000403441 GPSM2P81274 684 aa15.99■□□□□ 0.15
PRAME-204ENST00000403441 RTL5Q5HYW3 569 aaPredicted RBP15.99■□□□□ 0.15
PRAME-204ENST00000403441 TSKSQ9UJT2 592 aa15.99■□□□□ 0.15
PRAME-204ENST00000403441 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
PRAME-204ENST00000403441 ECE2O60344 883 aa15.98■□□□□ 0.15
PRAME-204ENST00000403441 NOGQ13253 232 aa15.98■□□□□ 0.15
PRAME-204ENST00000403441 TRIM28Q13263 835 aaKnown RBP15.98■□□□□ 0.15
PRAME-204ENST00000403441 RIC3Q7Z5B4 369 aa15.98■□□□□ 0.15
PRAME-204ENST00000403441 USP48Q86UV5 1035 aa15.98■□□□□ 0.15
PRAME-204ENST00000403441 POLLQ9UGP5 575 aa15.98■□□□□ 0.15
PRAME-204ENST00000403441 HUNKP57058 714 aa15.97■□□□□ 0.15
PRAME-204ENST00000403441 RPS8P62241 208 aaKnown RBP15.97■□□□□ 0.15
PRAME-204ENST00000403441 CALD1Q05682 793 aaKnown RBP15.97■□□□□ 0.15
PRAME-204ENST00000403441 TBC1D10BQ4KMP7 808 aaPredicted RBP15.97■□□□□ 0.15
PRAME-204ENST00000403441 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
PRAME-204ENST00000403441 SAMD7Q7Z3H4 446 aa15.97■□□□□ 0.15
PRAME-204ENST00000403441 KRT26Q7Z3Y9 468 aa15.97■□□□□ 0.15
PRAME-204ENST00000403441 MBIPQ9NS73 344 aa15.97■□□□□ 0.15
PRAME-204ENST00000403441 CCDC85CA6NKD9 419 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms