RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 COL11A2P13942 1736 aaPredicted RBP21.68■■□□□ 1.06
PTCHD3P3-201ENST00000403073 RLBP1P12271 317 aa21.67■■□□□ 1.06
PTCHD3P3-201ENST00000403073 FOXO4P98177 505 aa21.67■■□□□ 1.06
PTCHD3P3-201ENST00000403073 CCDC152Q4G0S7 254 aa21.67■■□□□ 1.06
PTCHD3P3-201ENST00000403073 EPHA10Q5JZY3 1008 aa21.67■■□□□ 1.06
PTCHD3P3-201ENST00000403073 GRIN3BO60391 1043 aa21.66■■□□□ 1.06
PTCHD3P3-201ENST00000403073 FTSJ3Q8IY81 847 aaKnown RBP21.66■■□□□ 1.06
PTCHD3P3-201ENST00000403073 PANK1Q8TE04 598 aa21.66■■□□□ 1.06
PTCHD3P3-201ENST00000403073 SUCLG2Q96I99 432 aa21.66■■□□□ 1.06
PTCHD3P3-201ENST00000403073 SEC31BQ9NQW1 1179 aa21.66■■□□□ 1.06
PTCHD3P3-201ENST00000403073 CSF1RP07333 972 aa21.65■■□□□ 1.06
PTCHD3P3-201ENST00000403073 OLFM4Q6UX06 510 aa21.65■■□□□ 1.06
PTCHD3P3-201ENST00000403073 ARHGAP27Q6ZUM4 889 aa21.65■■□□□ 1.06
PTCHD3P3-201ENST00000403073 C7orf43Q8WVR3 580 aa21.65■■□□□ 1.06
PTCHD3P3-201ENST00000403073 KAZALD1Q96I82 304 aa21.65■■□□□ 1.06
PTCHD3P3-201ENST00000403073 GREM2Q9H772 168 aa21.65■■□□□ 1.06
PTCHD3P3-201ENST00000403073 DDX60Q8IY21 1712 aaKnown RBP21.65■■□□□ 1.06
PTCHD3P3-201ENST00000403073 GRAPQ13588 217 aa21.64■■□□□ 1.05
PTCHD3P3-201ENST00000403073 SLC51AQ86UW1 340 aa21.64■■□□□ 1.05
PTCHD3P3-201ENST00000403073 GRAPLQ8TC17 118 aaPredicted RBP21.64■■□□□ 1.05
PTCHD3P3-201ENST00000403073 CELF1Q92879 486 aaKnown RBP21.64■■□□□ 1.05
PTCHD3P3-201ENST00000403073 MEIS3Q99687 375 aa21.64■■□□□ 1.05
PTCHD3P3-201ENST00000403073 PPEF1O14829 653 aaPredicted RBP21.63■■□□□ 1.05
PTCHD3P3-201ENST00000403073 BBOX1O75936 387 aa21.63■■□□□ 1.05
PTCHD3P3-201ENST00000403073 LMBR1LQ6UX01 489 aa21.63■■□□□ 1.05
PTCHD3P3-201ENST00000403073 UBTFL1P0CB47 393 aaPredicted RBP21.62■■□□□ 1.05
PTCHD3P3-201ENST00000403073 DLEC1Q9Y238 1755 aa21.61■■□□□ 1.05
PTCHD3P3-201ENST00000403073 MS4A1P11836 297 aa21.61■■□□□ 1.05
PTCHD3P3-201ENST00000403073 RPS8P62241 208 aaKnown RBP21.61■■□□□ 1.05
PTCHD3P3-201ENST00000403073 FAM161AQ3B820 660 aa21.61■■□□□ 1.05
PTCHD3P3-201ENST00000403073 ITPRIPQ8IWB1 547 aa21.61■■□□□ 1.05
PTCHD3P3-201ENST00000403073 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.61■■□□□ 1.05
PTCHD3P3-201ENST00000403073 BICC1Q9H694 974 aaKnown RBP21.61■■□□□ 1.05
PTCHD3P3-201ENST00000403073 CHMP3Q9Y3E7 222 aa21.61■■□□□ 1.05
PTCHD3P3-201ENST00000403073 C20orf194Q5TEA3 1177 aa21.6■■□□□ 1.05
PTCHD3P3-201ENST00000403073 ANKRD44Q8N8A2 993 aa21.6■■□□□ 1.05
PTCHD3P3-201ENST00000403073 ITGA6P23229 1130 aa21.59■■□□□ 1.05
PTCHD3P3-201ENST00000403073 BRCA1P38398 1863 aaKnown RBP21.59■■□□□ 1.05
PTCHD3P3-201ENST00000403073 ATP6V0A2Q9Y487 856 aa21.59■■□□□ 1.05
PTCHD3P3-201ENST00000403073 LAMB2P55268 1798 aa21.59■■□□□ 1.05
PTCHD3P3-201ENST00000403073 SLX4Q8IY92 1834 aa21.58■■□□□ 1.05
PTCHD3P3-201ENST00000403073 GNAI3P08754 354 aa21.58■■□□□ 1.05
PTCHD3P3-201ENST00000403073 CCDC93Q567U6 631 aa21.58■■□□□ 1.05
PTCHD3P3-201ENST00000403073 SOGA3Q5TF21 947 aa21.58■■□□□ 1.05
PTCHD3P3-201ENST00000403073 ANKRD18AQ8IVF6 992 aa21.58■■□□□ 1.05
PTCHD3P3-201ENST00000403073 SP8Q8IXZ3 490 aa21.58■■□□□ 1.05
PTCHD3P3-201ENST00000403073 LRRFIP2Q9Y608 721 aaKnown RBP21.58■■□□□ 1.05
PTCHD3P3-201ENST00000403073 RTL9Q8NET4 1388 aa21.58■■□□□ 1.04
PTCHD3P3-201ENST00000403073 COL4A1P02462 1669 aa21.57■■□□□ 1.04
PTCHD3P3-201ENST00000403073 ZBTB7BO15156 539 aaPredicted RBP21.57■■□□□ 1.04
PTCHD3P3-201ENST00000403073 RABL6Q3YEC7 729 aaPredicted RBP21.57■■□□□ 1.04
PTCHD3P3-201ENST00000403073 CDC5LQ99459 802 aaKnown RBP21.57■■□□□ 1.04
PTCHD3P3-201ENST00000403073 COG6Q9Y2V7 657 aa21.57■■□□□ 1.04
PTCHD3P3-201ENST00000403073 ANKRD18BA2A2Z9 1011 aa21.56■■□□□ 1.04
PTCHD3P3-201ENST00000403073 NFKBIEO00221 500 aa21.56■■□□□ 1.04
PTCHD3P3-201ENST00000403073 RRP1P56182 461 aaKnown RBP21.56■■□□□ 1.04
PTCHD3P3-201ENST00000403073 RASSF7Q02833 373 aa21.56■■□□□ 1.04
PTCHD3P3-201ENST00000403073 IFIT5Q13325 482 aaKnown RBP21.56■■□□□ 1.04
PTCHD3P3-201ENST00000403073 PDE3AQ14432 1141 aa21.56■■□□□ 1.04
PTCHD3P3-201ENST00000403073 CC2D2BQ6DHV5 1058 aa21.56■■□□□ 1.04
PTCHD3P3-201ENST00000403073 TMX4Q9H1E5 349 aaPredicted RBP21.56■■□□□ 1.04
PTCHD3P3-201ENST00000403073 CCDC57Q2TAC2 916 aa21.55■■□□□ 1.04
PTCHD3P3-201ENST00000403073 TMC4Q7Z404 712 aa21.55■■□□□ 1.04
PTCHD3P3-201ENST00000403073 RTKN2Q8IZC4 609 aa21.55■■□□□ 1.04
PTCHD3P3-201ENST00000403073 ZNF594Q96JF6 807 aaPredicted RBP21.55■■□□□ 1.04
PTCHD3P3-201ENST00000403073 HDAC5Q9UQL6 1122 aa21.55■■□□□ 1.04
PTCHD3P3-201ENST00000403073 MVPQ14764 893 aaKnown RBP21.54■■□□□ 1.04
PTCHD3P3-201ENST00000403073 GNAI2P04899 355 aa21.53■■□□□ 1.04
PTCHD3P3-201ENST00000403073 IGHMBP2P38935 993 aaKnown RBP21.53■■□□□ 1.04
PTCHD3P3-201ENST00000403073 PRELPP51888 382 aa21.53■■□□□ 1.04
PTCHD3P3-201ENST00000403073 TAOK3Q9H2K8 898 aa21.53■■□□□ 1.04
PTCHD3P3-201ENST00000403073 BSDC1Q9NW68 430 aaPredicted RBP21.53■■□□□ 1.04
PTCHD3P3-201ENST00000403073 GPSM2P81274 684 aa21.52■■□□□ 1.04
PTCHD3P3-201ENST00000403073 FKBP4Q02790 459 aaKnown RBP eCLIP21.52■■□□□ 1.04
PTCHD3P3-201ENST00000403073 TAF7LQ5H9L4 462 aa21.52■■□□□ 1.04
PTCHD3P3-201ENST00000403073 MPNDQ8N594 471 aa21.52■■□□□ 1.04
PTCHD3P3-201ENST00000403073 MPHOSPH8Q99549 860 aa21.52■■□□□ 1.04
PTCHD3P3-201ENST00000403073 NSFL1CQ9UNZ2 370 aaKnown RBP21.52■■□□□ 1.04
PTCHD3P3-201ENST00000403073 GOLGB1Q14789 3259 aaKnown RBP21.52■■□□□ 1.04
PTCHD3P3-201ENST00000403073 GRIPAP1Q4V328 841 aa21.51■■□□□ 1.03
PTCHD3P3-201ENST00000403073 DPP8Q6V1X1 898 aaPredicted RBP21.51■■□□□ 1.03
PTCHD3P3-201ENST00000403073 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
PTCHD3P3-201ENST00000403073 ARFGEF1Q9Y6D6 1849 aa21.5■■□□□ 1.03
PTCHD3P3-201ENST00000403073 TAF1P21675 1872 aa21.5■■□□□ 1.03
PTCHD3P3-201ENST00000403073 SNED1Q8TER0 1413 aa21.5■■□□□ 1.03
PTCHD3P3-201ENST00000403073 KLHDC4Q8TBB5 520 aa21.5■■□□□ 1.03
PTCHD3P3-201ENST00000403073 DDX19BQ9UMR2 479 aa21.5■■□□□ 1.03
PTCHD3P3-201ENST00000403073 MINPP1Q9UNW1 487 aa21.5■■□□□ 1.03
PTCHD3P3-201ENST00000403073 SUPT16HQ9Y5B9 1047 aaKnown RBP21.5■■□□□ 1.03
PTCHD3P3-201ENST00000403073 RFX5P48382 616 aaPredicted RBP21.49■■□□□ 1.03
PTCHD3P3-201ENST00000403073 C9orf131Q5VYM1 1079 aa21.49■■□□□ 1.03
PTCHD3P3-201ENST00000403073 LDHAL6AQ6ZMR3 332 aa21.49■■□□□ 1.03
PTCHD3P3-201ENST00000403073 PSMD1Q99460 953 aa21.49■■□□□ 1.03
PTCHD3P3-201ENST00000403073 ZNF277Q9NRM2 450 aaPredicted RBP21.49■■□□□ 1.03
PTCHD3P3-201ENST00000403073 LTBP3Q9NS15 1303 aa21.49■■□□□ 1.03
PTCHD3P3-201ENST00000403073 CACNA1SQ13698 1873 aa21.48■■□□□ 1.03
PTCHD3P3-201ENST00000403073 LMNB1P20700 586 aa21.48■■□□□ 1.03
PTCHD3P3-201ENST00000403073 PUS3Q9BZE2 481 aaKnown RBP21.48■■□□□ 1.03
PTCHD3P3-201ENST00000403073 ANKIB1Q9P2G1 1089 aa21.48■■□□□ 1.03
PTCHD3P3-201ENST00000403073 RTFDC1Q9BY42 306 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms