RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 SF3B3Q15393 1217 aaKnown RBP33.64■■■□□ 2.98
CGREF1-204ENST00000402550 ZBTB40Q9NUA8 1239 aa33.64■■■□□ 2.98
CGREF1-204ENST00000402550 MASTLQ96GX5 879 aa33.64■■■□□ 2.98
CGREF1-204ENST00000402550 LAMB2P55268 1798 aa33.62■■■□□ 2.97
CGREF1-204ENST00000402550 GNAI2P04899 355 aa33.62■■■□□ 2.97
CGREF1-204ENST00000402550 NPR1P16066 1061 aa33.62■■■□□ 2.97
CGREF1-204ENST00000402550 ZNF622Q969S3 477 aaKnown RBP eCLIP33.62■■■□□ 2.97
CGREF1-204ENST00000402550 COL11A2P13942 1736 aaPredicted RBP33.61■■■□□ 2.97
CGREF1-204ENST00000402550 PIM2Q9P1W9 311 aa33.61■■■□□ 2.97
CGREF1-204ENST00000402550 HOXA10P31260 410 aaPredicted RBP33.6■■■□□ 2.97
CGREF1-204ENST00000402550 STYK1Q6J9G0 422 aa33.6■■■□□ 2.97
CGREF1-204ENST00000402550 TTLL11Q8NHH1 800 aa33.6■■■□□ 2.97
CGREF1-204ENST00000402550 RPGRQ92834 1020 aaKnown RBP33.6■■■□□ 2.97
CGREF1-204ENST00000402550 KAZALD1Q96I82 304 aa33.6■■■□□ 2.97
CGREF1-204ENST00000402550 SUCLG2Q96I99 432 aa33.6■■■□□ 2.97
CGREF1-204ENST00000402550 MYH3P11055 1940 aa33.6■■■□□ 2.97
CGREF1-204ENST00000402550 CTSWP56202 376 aa33.6■■■□□ 2.97
CGREF1-204ENST00000402550 FOXO4P98177 505 aa33.6■■■□□ 2.97
CGREF1-204ENST00000402550 EPHA10Q5JZY3 1008 aa33.6■■■□□ 2.97
CGREF1-204ENST00000402550 ERICH6BQ5W0A0 696 aa33.59■■■□□ 2.97
CGREF1-204ENST00000402550 CSF1RP07333 972 aa33.58■■■□□ 2.97
CGREF1-204ENST00000402550 WWC3Q9ULE0 1092 aa33.58■■■□□ 2.97
CGREF1-204ENST00000402550 LRRFIP2Q9Y608 721 aaKnown RBP33.58■■■□□ 2.97
CGREF1-204ENST00000402550 DLEC1Q9Y238 1755 aa33.58■■■□□ 2.97
CGREF1-204ENST00000402550 RBM17Q96I25 401 aaKnown RBP33.57■■■□□ 2.96
CGREF1-204ENST00000402550 ALDH1B1P30837 517 aa33.56■■■□□ 2.96
CGREF1-204ENST00000402550 CCDC152Q4G0S7 254 aa33.56■■■□□ 2.96
CGREF1-204ENST00000402550 TTLL6Q8N841 843 aa33.56■■■□□ 2.96
CGREF1-204ENST00000402550 CCDC85AQ96PX6 553 aaPredicted RBP33.56■■■□□ 2.96
CGREF1-204ENST00000402550 CRAMP1Q96RY5 1269 aa33.56■■■□□ 2.96
CGREF1-204ENST00000402550 C1orf115Q9H7X2 142 aa33.56■■■□□ 2.96
CGREF1-204ENST00000402550 BRCA1P38398 1863 aaKnown RBP33.56■■■□□ 2.96
CGREF1-204ENST00000402550 CNKSR1Q969H4 720 aa33.55■■■□□ 2.96
CGREF1-204ENST00000402550 DDX46Q7L014 1031 aaKnown RBP33.55■■■□□ 2.96
CGREF1-204ENST00000402550 LMBR1LQ6UX01 489 aa33.54■■■□□ 2.96
CGREF1-204ENST00000402550 BICC1Q9H694 974 aaKnown RBP33.54■■■□□ 2.96
CGREF1-204ENST00000402550 DALRD3Q5D0E6 543 aaKnown RBP33.53■■■□□ 2.96
CGREF1-204ENST00000402550 GREM2Q9H772 168 aa33.53■■■□□ 2.96
CGREF1-204ENST00000402550 SEC31BQ9NQW1 1179 aa33.52■■■□□ 2.96
CGREF1-204ENST00000402550 RABL6Q3YEC7 729 aaPredicted RBP33.51■■■□□ 2.96
CGREF1-204ENST00000402550 ANKRD44Q8N8A2 993 aa33.51■■■□□ 2.95
CGREF1-204ENST00000402550 BCS1LQ9Y276 419 aa33.51■■■□□ 2.95
CGREF1-204ENST00000402550 TAF1P21675 1872 aa33.5■■■□□ 2.95
CGREF1-204ENST00000402550 PRPF40BQ6NWY9 871 aaKnown RBP33.5■■■□□ 2.95
CGREF1-204ENST00000402550 RTL9Q8NET4 1388 aa33.49■■■□□ 2.95
CGREF1-204ENST00000402550 GRAPQ13588 217 aa33.48■■■□□ 2.95
CGREF1-204ENST00000402550 FAM161AQ3B820 660 aa33.48■■■□□ 2.95
CGREF1-204ENST00000402550 RPAP2Q8IXW5 612 aaPredicted RBP33.48■■■□□ 2.95
CGREF1-204ENST00000402550 GRAPLQ8TC17 118 aaPredicted RBP33.48■■■□□ 2.95
CGREF1-204ENST00000402550 CELF1Q92879 486 aaKnown RBP33.48■■■□□ 2.95
CGREF1-204ENST00000402550 SLX4Q8IY92 1834 aa33.48■■■□□ 2.95
CGREF1-204ENST00000402550 CHMP3Q9Y3E7 222 aa33.47■■■□□ 2.95
CGREF1-204ENST00000402550 UTRNP46939 3433 aa33.47■■■□□ 2.95
CGREF1-204ENST00000402550 BBOX1O75936 387 aa33.47■■■□□ 2.95
CGREF1-204ENST00000402550 ITGA6P23229 1130 aa33.47■■■□□ 2.95
CGREF1-204ENST00000402550 CACNA1SQ13698 1873 aa33.46■■■□□ 2.95
CGREF1-204ENST00000402550 RPS8P62241 208 aaKnown RBP33.46■■■□□ 2.95
CGREF1-204ENST00000402550 PELP1Q8IZL8 1130 aaKnown RBP33.46■■■□□ 2.95
CGREF1-204ENST00000402550 YBX3P16989 372 aaKnown RBP eCLIP33.45■■■□□ 2.95
CGREF1-204ENST00000402550 CEP85Q6P2H3 762 aa33.45■■■□□ 2.95
CGREF1-204ENST00000402550 IFIT5Q13325 482 aaKnown RBP33.44■■■□□ 2.94
CGREF1-204ENST00000402550 C7orf43Q8WVR3 580 aa33.44■■■□□ 2.94
CGREF1-204ENST00000402550 PCDHB15Q9Y5E8 787 aa33.44■■■□□ 2.94
CGREF1-204ENST00000402550 GPR162Q16538 588 aa33.43■■■□□ 2.94
CGREF1-204ENST00000402550 CDC5LQ99459 802 aaKnown RBP33.43■■■□□ 2.94
CGREF1-204ENST00000402550 COL4A1P02462 1669 aa33.43■■■□□ 2.94
CGREF1-204ENST00000402550 ANKRD18BA2A2Z9 1011 aa33.43■■■□□ 2.94
CGREF1-204ENST00000402550 HMMRO75330 724 aa33.43■■■□□ 2.94
CGREF1-204ENST00000402550 MTX1Q13505 466 aa33.43■■■□□ 2.94
CGREF1-204ENST00000402550 CCDC57Q2TAC2 916 aa33.43■■■□□ 2.94
CGREF1-204ENST00000402550 SRGAP3O43295 1099 aa33.42■■■□□ 2.94
CGREF1-204ENST00000402550 C21orf2O43822 256 aa33.42■■■□□ 2.94
CGREF1-204ENST00000402550 ATP8B2P98198 1209 aa33.42■■■□□ 2.94
CGREF1-204ENST00000402550 ZNF219Q9P2Y4 722 aaPredicted RBP33.42■■■□□ 2.94
CGREF1-204ENST00000402550 PPEF1O14829 653 aaPredicted RBP33.41■■■□□ 2.94
CGREF1-204ENST00000402550 ANKRD18AQ8IVF6 992 aa33.41■■■□□ 2.94
CGREF1-204ENST00000402550 ARFGEF1Q9Y6D6 1849 aa33.4■■■□□ 2.94
CGREF1-204ENST00000402550 ATP6V0A2Q9Y487 856 aa33.39■■■□□ 2.94
CGREF1-204ENST00000402550 GTF3C3Q9Y5Q9 886 aa33.39■■■□□ 2.94
CGREF1-204ENST00000402550 OLFM4Q6UX06 510 aa33.38■■■□□ 2.93
CGREF1-204ENST00000402550 PPP4R2Q9NY27 417 aa33.38■■■□□ 2.93
CGREF1-204ENST00000402550 TMC4Q7Z404 712 aa33.38■■■□□ 2.93
CGREF1-204ENST00000402550 SP8Q8IXZ3 490 aa33.38■■■□□ 2.93
CGREF1-204ENST00000402550 PNMA6EA0A0J9YXQ4 647 aa33.37■■■□□ 2.93
CGREF1-204ENST00000402550 SLC51AQ86UW1 340 aa33.37■■■□□ 2.93
CGREF1-204ENST00000402550 ZNF594Q96JF6 807 aaPredicted RBP33.37■■■□□ 2.93
CGREF1-204ENST00000402550 IGHMBP2P38935 993 aaKnown RBP33.36■■■□□ 2.93
CGREF1-204ENST00000402550 RWDD1Q9H446 243 aaPredicted RBP33.36■■■□□ 2.93
CGREF1-204ENST00000402550 BSDC1Q9NW68 430 aaPredicted RBP33.36■■■□□ 2.93
CGREF1-204ENST00000402550 CCDC136Q96JN2 1154 aa33.35■■■□□ 2.93
CGREF1-204ENST00000402550 RFX5P48382 616 aaPredicted RBP33.34■■■□□ 2.93
CGREF1-204ENST00000402550 SIRT2Q8IXJ6 389 aa33.34■■■□□ 2.93
CGREF1-204ENST00000402550 SSH3Q8TE77 659 aa33.34■■■□□ 2.93
CGREF1-204ENST00000402550 MPHOSPH8Q99549 860 aa33.34■■■□□ 2.93
CGREF1-204ENST00000402550 HDAC1Q13547 482 aaPredicted RBP33.34■■■□□ 2.93
CGREF1-204ENST00000402550 TAF7LQ5H9L4 462 aa33.34■■■□□ 2.93
CGREF1-204ENST00000402550 SOGA3Q5TF21 947 aa33.34■■■□□ 2.93
CGREF1-204ENST00000402550 CC2D2BQ6DHV5 1058 aa33.34■■■□□ 2.93
CGREF1-204ENST00000402550 DCAF8L1A6NGE4 600 aa33.33■■■□□ 2.93
CGREF1-204ENST00000402550 GRIN3BO60391 1043 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms