RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 UTP14AQ9BVJ6 771 aaKnown RBP31.32■■■□□ 2.6
CPNE1-205ENST00000401607 C4BP0C0L5 1744 aa31.31■■■□□ 2.6
CPNE1-205ENST00000401607 SH3TC1Q8TE82 1336 aa31.31■■■□□ 2.6
CPNE1-205ENST00000401607 PUS3Q9BZE2 481 aaKnown RBP31.31■■■□□ 2.6
CPNE1-205ENST00000401607 GNPATO15228 680 aa31.3■■■□□ 2.6
CPNE1-205ENST00000401607 DBNLQ9UJU6 430 aaKnown RBP31.3■■■□□ 2.6
CPNE1-205ENST00000401607 RGL2O15211 777 aa31.3■■■□□ 2.6
CPNE1-205ENST00000401607 NTSR2O95665 410 aa31.3■■■□□ 2.6
CPNE1-205ENST00000401607 IFIT5Q13325 482 aaKnown RBP31.3■■■□□ 2.6
CPNE1-205ENST00000401607 CNTROBQ8N137 903 aa31.3■■■□□ 2.6
CPNE1-205ENST00000401607 GREM2Q9H772 168 aa31.3■■■□□ 2.6
CPNE1-205ENST00000401607 AK7Q96M32 723 aa31.29■■■□□ 2.6
CPNE1-205ENST00000401607 FBXO3Q9UK99 471 aa31.29■■■□□ 2.6
CPNE1-205ENST00000401607 DDX60Q8IY21 1712 aaKnown RBP31.29■■■□□ 2.6
CPNE1-205ENST00000401607 FAM177BA6PVY3 158 aa31.28■■■□□ 2.6
CPNE1-205ENST00000401607 BCL2L12Q9HB09 334 aa31.28■■■□□ 2.6
CPNE1-205ENST00000401607 GPR108Q9NPR9 543 aa31.28■■■□□ 2.6
CPNE1-205ENST00000401607 AMIGO3Q86WK7 504 aa31.28■■■□□ 2.6
CPNE1-205ENST00000401607 ESYT1Q9BSJ8 1104 aa31.28■■■□□ 2.6
CPNE1-205ENST00000401607 LAMB2P55268 1798 aa31.27■■■□□ 2.6
CPNE1-205ENST00000401607 ITGA6P23229 1130 aa31.27■■■□□ 2.6
CPNE1-205ENST00000401607 USP26Q9BXU7 913 aa31.27■■■□□ 2.6
CPNE1-205ENST00000401607 LRRC4BQ9NT99 713 aa31.27■■■□□ 2.6
CPNE1-205ENST00000401607 NARFQ9UHQ1 456 aa31.27■■■□□ 2.6
CPNE1-205ENST00000401607 ZNF609O15014 1411 aa31.26■■■□□ 2.59
CPNE1-205ENST00000401607 RTCBQ9Y3I0 505 aaKnown RBP31.26■■■□□ 2.59
CPNE1-205ENST00000401607 SLC4A3P48751 1232 aa31.25■■■□□ 2.59
CPNE1-205ENST00000401607 DBNDD2Q9BQY9 259 aa31.25■■■□□ 2.59
CPNE1-205ENST00000401607 HCLS1P14317 486 aaPredicted RBP31.25■■■□□ 2.59
CPNE1-205ENST00000401607 KIF2CQ99661 725 aa31.25■■■□□ 2.59
CPNE1-205ENST00000401607 TRIM37O94972 964 aa31.24■■■□□ 2.59
CPNE1-205ENST00000401607 REC8O95072 547 aa31.24■■■□□ 2.59
CPNE1-205ENST00000401607 TAF7LQ5H9L4 462 aa31.24■■■□□ 2.59
CPNE1-205ENST00000401607 SRP68Q9UHB9 627 aaKnown RBP31.24■■■□□ 2.59
CPNE1-205ENST00000401607 ANKRD18BA2A2Z9 1011 aa31.23■■■□□ 2.59
CPNE1-205ENST00000401607 USPL1Q5W0Q7 1092 aa31.23■■■□□ 2.59
CPNE1-205ENST00000401607 C4AP0C0L4 1744 aa31.23■■■□□ 2.59
CPNE1-205ENST00000401607 LRP5O75197 1615 aa31.23■■■□□ 2.59
CPNE1-205ENST00000401607 ATP5JP18859 108 aa31.22■■■□□ 2.59
CPNE1-205ENST00000401607 EVI5LQ96CN4 794 aa31.22■■■□□ 2.59
CPNE1-205ENST00000401607 BOLA2Q9H3K6 86 aa31.22■■■□□ 2.59
CPNE1-205ENST00000401607 RIC1Q4ADV7 1423 aa31.22■■■□□ 2.59
CPNE1-205ENST00000401607 TBC1D9BQ66K14 1250 aa31.21■■■□□ 2.59
CPNE1-205ENST00000401607 ARHGEF1Q92888 912 aaKnown RBP31.21■■■□□ 2.59
CPNE1-205ENST00000401607 CEP126Q9P2H0 1117 aa31.2■■■□□ 2.59
CPNE1-205ENST00000401607 IL25Q9H293 177 aa31.2■■■□□ 2.58
CPNE1-205ENST00000401607 RIPOR2Q9Y4F9 1068 aa31.2■■■□□ 2.58
CPNE1-205ENST00000401607 COL24A1Q17RW2 1714 aa31.19■■■□□ 2.58
CPNE1-205ENST00000401607 TIMM10P62072 90 aa31.19■■■□□ 2.58
CPNE1-205ENST00000401607 A0A1B0GUL7 405 aa31.17■■■□□ 2.58
CPNE1-205ENST00000401607 ZPR1O75312 459 aa31.17■■■□□ 2.58
CPNE1-205ENST00000401607 BECN1Q14457 450 aa31.17■■■□□ 2.58
CPNE1-205ENST00000401607 SLC27A3Q5K4L6 730 aa31.17■■■□□ 2.58
CPNE1-205ENST00000401607 LDHAL6AQ6ZMR3 332 aa31.17■■■□□ 2.58
CPNE1-205ENST00000401607 NEUROD6Q96NK8 337 aa31.17■■■□□ 2.58
CPNE1-205ENST00000401607 ERICH6Q7L0X2 663 aa31.17■■■□□ 2.58
CPNE1-205ENST00000401607 DAXXQ9UER7 740 aaPredicted RBP31.17■■■□□ 2.58
CPNE1-205ENST00000401607 HSP90B1P14625 803 aaKnown RBP31.16■■■□□ 2.58
CPNE1-205ENST00000401607 BICDL1Q6ZP65 573 aa31.16■■■□□ 2.58
CPNE1-205ENST00000401607 TBC1D2Q9BYX2 928 aa31.16■■■□□ 2.58
CPNE1-205ENST00000401607 RTL9Q8NET4 1388 aa31.16■■■□□ 2.58
CPNE1-205ENST00000401607 UBR3Q6ZT12 1888 aa31.15■■■□□ 2.58
CPNE1-205ENST00000401607 ERFEQ4G0M1 354 aa31.15■■■□□ 2.58
CPNE1-205ENST00000401607 SGSM2O43147 1006 aa31.14■■■□□ 2.58
CPNE1-205ENST00000401607 PHF14O94880 888 aa31.14■■■□□ 2.58
CPNE1-205ENST00000401607 RXRBP28702 533 aa31.14■■■□□ 2.58
CPNE1-205ENST00000401607 TRAPPC3LQ5T215 181 aa31.14■■■□□ 2.58
CPNE1-205ENST00000401607 CNNM1Q9NRU3 951 aa31.14■■■□□ 2.58
CPNE1-205ENST00000401607 AKAP2Q9Y2D5 859 aa31.14■■■□□ 2.58
CPNE1-205ENST00000401607 CCDC152Q4G0S7 254 aa31.13■■■□□ 2.57
CPNE1-205ENST00000401607 EP400Q96L91 3159 aa31.13■■■□□ 2.57
CPNE1-205ENST00000401607 METTL24Q5JXM2 366 aa31.12■■■□□ 2.57
CPNE1-205ENST00000401607 HAUS7Q99871 368 aa31.12■■■□□ 2.57
CPNE1-205ENST00000401607 VGLL2Q8N8G2 317 aa31.12■■■□□ 2.57
CPNE1-205ENST00000401607 ANO2Q9NQ90 1003 aa31.12■■■□□ 2.57
CPNE1-205ENST00000401607 SEC31BQ9NQW1 1179 aa31.12■■■□□ 2.57
CPNE1-205ENST00000401607 DIAPH3Q9NSV4 1193 aa31.12■■■□□ 2.57
CPNE1-205ENST00000401607 RFC4P35249 363 aa31.11■■■□□ 2.57
CPNE1-205ENST00000401607 CWC27Q6UX04 472 aaKnown RBP31.11■■■□□ 2.57
CPNE1-205ENST00000401607 EDC3Q96F86 508 aaKnown RBP31.11■■■□□ 2.57
CPNE1-205ENST00000401607 SETDB2Q96T68 719 aa31.11■■■□□ 2.57
CPNE1-205ENST00000401607 CASZ1Q86V15 1759 aa31.11■■■□□ 2.57
CPNE1-205ENST00000401607 ABCC12Q96J65 1359 aa31.11■■■□□ 2.57
CPNE1-205ENST00000401607 ADRA2BP18089 450 aa31.1■■■□□ 2.57
CPNE1-205ENST00000401607 RGS17Q9UGC6 210 aaPredicted RBP31.1■■■□□ 2.57
CPNE1-205ENST00000401607 PROM2Q8N271 834 aa31.1■■■□□ 2.57
CPNE1-205ENST00000401607 ADORA1P30542 326 aa31.09■■■□□ 2.57
CPNE1-205ENST00000401607 SLC10A5Q5PT55 438 aa31.09■■■□□ 2.57
CPNE1-205ENST00000401607 C3orf67Q6ZVT6 689 aa31.09■■■□□ 2.57
CPNE1-205ENST00000401607 FSD1Q9BTV5 496 aa31.09■■■□□ 2.57
CPNE1-205ENST00000401607 NDUFB9Q9Y6M9 179 aa31.09■■■□□ 2.57
CPNE1-205ENST00000401607 EPB41L2O43491 1005 aaKnown RBP31.08■■■□□ 2.57
CPNE1-205ENST00000401607 TXNRD1Q16881 649 aa31.08■■■□□ 2.57
CPNE1-205ENST00000401607 XAGE2Q96GT9 111 aa31.08■■■□□ 2.57
CPNE1-205ENST00000401607 NYXQ9GZU5 481 aa31.08■■■□□ 2.57
CPNE1-205ENST00000401607 COL4A1P02462 1669 aa31.08■■■□□ 2.57
CPNE1-205ENST00000401607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.07■■■□□ 2.56
CPNE1-205ENST00000401607 SNX21Q969T3 373 aa31.07■■■□□ 2.56
CPNE1-205ENST00000401607 DNAJC2Q99543 621 aaKnown RBP31.07■■■□□ 2.56
CPNE1-205ENST00000401607 HIP1O00291 1037 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms