RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 ZNF579Q8NAF0 562 aaKnown RBP7.56□□□□□ -1.2
CLIP4-202ENST00000401605 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 LIMD1Q9UGP4 676 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 FARP1Q9Y4F1 1045 aaPredicted RBP7.56□□□□□ -1.2
CLIP4-202ENST00000401605 KIF7Q2M1P5 1343 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 MYBPC2Q14324 1141 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 ASAP1Q9ULH1 1129 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 CLEC11AQ9Y240 323 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 KIF20BQ96Q89 1820 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 ERVV-2B6SEH9 535 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 SSFA2P28290 1259 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 TMEM259Q4ZIN3 620 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 MSL1Q68DK7 614 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 RNF39Q9H2S5 420 aa7.55□□□□□ -1.2
CLIP4-202ENST00000401605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.54□□□□□ -1.2
CLIP4-202ENST00000401605 ATP6V1AP38606 617 aa7.54□□□□□ -1.2
CLIP4-202ENST00000401605 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
CLIP4-202ENST00000401605 ZNF530Q6P9A1 599 aaPredicted RBP7.54□□□□□ -1.2
CLIP4-202ENST00000401605 IFNL1Q8IU54 200 aa7.54□□□□□ -1.2
CLIP4-202ENST00000401605 TSPAN18Q96SJ8 248 aa7.54□□□□□ -1.2
CLIP4-202ENST00000401605 ATG3Q9NT62 314 aa7.54□□□□□ -1.2
CLIP4-202ENST00000401605 DOT1LQ8TEK3 1739 aa7.54□□□□□ -1.2
CLIP4-202ENST00000401605 UTRNP46939 3433 aa7.54□□□□□ -1.2
CLIP4-202ENST00000401605 CALRP27797 417 aaKnown RBP7.53□□□□□ -1.2
CLIP4-202ENST00000401605 TAGLNQ01995 201 aaKnown RBP7.53□□□□□ -1.2
CLIP4-202ENST00000401605 LINC00116Q8NCU8 138 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 UCN2Q96RP3 112 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 SHANK3Q9BYB0 1731 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 IL13P35225 146 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 C1QBPQ07021 282 aaKnown RBP7.53□□□□□ -1.2
CLIP4-202ENST00000401605 ITPK1Q13572 414 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 C1orf141Q5JVX7 400 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 SULT6B1Q6IMI4 303 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 ZNF784Q8NCA9 323 aaPredicted RBP7.53□□□□□ -1.2
CLIP4-202ENST00000401605 NLGN2Q8NFZ4 835 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 DDX12PQ92771 950 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 TSPYL1Q9H0U9 437 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 FAM217BQ9NTX9 383 aaPredicted RBP7.53□□□□□ -1.2
CLIP4-202ENST00000401605 CD2APQ9Y5K6 639 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 MRVI1Q9Y6F6 885 aa7.53□□□□□ -1.2
CLIP4-202ENST00000401605 ATG7O95352 703 aa7.52□□□□□ -1.2
CLIP4-202ENST00000401605 MTHFSP49914 203 aa7.52□□□□□ -1.2
CLIP4-202ENST00000401605 CABP4P57796 275 aa7.52□□□□□ -1.2
CLIP4-202ENST00000401605 MTA1Q13330 715 aa7.52□□□□□ -1.2
CLIP4-202ENST00000401605 AMIGO3Q86WK7 504 aa7.52□□□□□ -1.2
CLIP4-202ENST00000401605 ZNF513Q8N8E2 541 aaPredicted RBP7.52□□□□□ -1.2
CLIP4-202ENST00000401605 TBC1D2Q9BYX2 928 aa7.52□□□□□ -1.2
CLIP4-202ENST00000401605 TFIP11Q9UBB9 837 aaKnown RBP7.52□□□□□ -1.2
CLIP4-202ENST00000401605 KDRP35968 1356 aa7.52□□□□□ -1.21
CLIP4-202ENST00000401605 ANKRD26Q9UPS8 1709 aa7.52□□□□□ -1.21
CLIP4-202ENST00000401605 PER1O15534 1290 aaPredicted RBP7.52□□□□□ -1.21
CLIP4-202ENST00000401605 GRIN3BO60391 1043 aa7.52□□□□□ -1.21
CLIP4-202ENST00000401605 RECKO95980 971 aa7.52□□□□□ -1.21
CLIP4-202ENST00000401605 PPP2R2DQ66LE6 453 aa7.52□□□□□ -1.21
CLIP4-202ENST00000401605 MICAL1Q8TDZ2 1067 aa7.52□□□□□ -1.21
CLIP4-202ENST00000401605 MYH16Q9H6N6 1097 aa7.52□□□□□ -1.21
CLIP4-202ENST00000401605 FOSBP53539 338 aa7.51□□□□□ -1.21
CLIP4-202ENST00000401605 TERF1P54274 439 aa7.51□□□□□ -1.21
CLIP4-202ENST00000401605 DPH6Q7L8W6 267 aa7.51□□□□□ -1.21
CLIP4-202ENST00000401605 FRAT1Q92837 279 aaPredicted RBP7.51□□□□□ -1.21
CLIP4-202ENST00000401605 MKL1Q969V6 931 aa7.51□□□□□ -1.21
CLIP4-202ENST00000401605 RBM42Q9BTD8 480 aaKnown RBP7.51□□□□□ -1.21
CLIP4-202ENST00000401605 RTCBQ9Y3I0 505 aaKnown RBP7.51□□□□□ -1.21
CLIP4-202ENST00000401605 RGPD2P0DJD1 1756 aa7.51□□□□□ -1.21
CLIP4-202ENST00000401605 PKD1L3Q7Z443 1732 aa7.51□□□□□ -1.21
CLIP4-202ENST00000401605 L1TD1Q5T7N2 865 aaKnown RBP7.51□□□□□ -1.21
CLIP4-202ENST00000401605 RC3H1Q5TC82 1133 aaKnown RBP7.51□□□□□ -1.21
CLIP4-202ENST00000401605 ANKRD23Q86SG2 305 aa7.51□□□□□ -1.21
CLIP4-202ENST00000401605 CEP83Q9Y592 693 aa7.51□□□□□ -1.21
CLIP4-202ENST00000401605 LY75O60449 1722 aa7.51□□□□□ -1.21
CLIP4-202ENST00000401605 KDM6AO15550 1401 aaPredicted RBP7.5□□□□□ -1.21
CLIP4-202ENST00000401605 ANP32CO43423 234 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 RAB11FIP3O75154 756 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 ZSCAN20P17040 1043 aaPredicted RBP7.5□□□□□ -1.21
CLIP4-202ENST00000401605 ERCC3P19447 782 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 TRAPPC3LQ5T215 181 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 SMIM5Q71RC9 77 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 SDR16C5Q8N3Y7 309 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 MSL3Q8N5Y2 521 aaKnown RBP7.5□□□□□ -1.21
CLIP4-202ENST00000401605 SLC4A9Q96Q91 983 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 FEZ2Q9UHY8 353 aaPredicted RBP7.5□□□□□ -1.21
CLIP4-202ENST00000401605 YBX3P16989 372 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLIP4-202ENST00000401605 AKAP4Q5JQC9 854 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 NFATC2IPQ8NCF5 419 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 SPDYE1Q8NFV5 336 aaPredicted RBP7.5□□□□□ -1.21
CLIP4-202ENST00000401605 RNF217Q8TC41 542 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 NPC1L1Q9UHC9 1359 aa7.5□□□□□ -1.21
CLIP4-202ENST00000401605 CNTNAP4Q9C0A0 1308 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 DIAPH1O60610 1272 aaKnown RBP7.49□□□□□ -1.21
CLIP4-202ENST00000401605 GPR37L1O60883 481 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 PTCD1O75127 700 aaKnown RBP7.49□□□□□ -1.21
CLIP4-202ENST00000401605 VAC14Q08AM6 782 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 FAM161AQ3B820 660 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 NPAS4Q8IUM7 802 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 NLGN1Q8N2Q7 840 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 EFCC1Q9HA90 598 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 NUB1Q9Y5A7 615 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 KAT6BQ8WYB5 2073 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 QSER1Q2KHR3 1735 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 TOGARAM1Q9Y4F4 1720 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms