RNA–Protein interactions for RNA: ENST00000400098.6

SNRPN-204, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 4

Gene SNRPN, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-204ENST00000400098 BCAR3O75815 825 aa11.35□□□□□ -0.59
SNRPN-204ENST00000400098 CT47B1P0C2W7 299 aaPredicted RBP11.35□□□□□ -0.59
SNRPN-204ENST00000400098 ALDH1B1P30837 517 aa11.35□□□□□ -0.59
SNRPN-204ENST00000400098 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
SNRPN-204ENST00000400098 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
SNRPN-204ENST00000400098 TNNQ9UQP3 1299 aa11.35□□□□□ -0.59
SNRPN-204ENST00000400098 DUOX1Q9NRD9 1551 aa11.35□□□□□ -0.59
SNRPN-204ENST00000400098 PTPRCP08575 1304 aa11.35□□□□□ -0.59
SNRPN-204ENST00000400098 COL4A5P29400 1685 aa11.34□□□□□ -0.59
SNRPN-204ENST00000400098 SF3B3Q15393 1217 aaKnown RBP11.34□□□□□ -0.59
SNRPN-204ENST00000400098 CELF1Q92879 486 aaKnown RBP11.34□□□□□ -0.59
SNRPN-204ENST00000400098 SEC31BQ9NQW1 1179 aa11.34□□□□□ -0.59
SNRPN-204ENST00000400098 PDE8AO60658 829 aa11.33□□□□□ -0.6
SNRPN-204ENST00000400098 GRAPQ13588 217 aa11.33□□□□□ -0.6
SNRPN-204ENST00000400098 CCDC93Q567U6 631 aa11.33□□□□□ -0.6
SNRPN-204ENST00000400098 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.6
SNRPN-204ENST00000400098 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
SNRPN-204ENST00000400098 GRAPLQ8TC17 118 aaPredicted RBP11.33□□□□□ -0.6
SNRPN-204ENST00000400098 YTHDC1Q96MU7 727 aaKnown RBP11.33□□□□□ -0.6
SNRPN-204ENST00000400098 SRCIN1Q9C0H9 1055 aa11.33□□□□□ -0.6
SNRPN-204ENST00000400098 RNF39Q9H2S5 420 aa11.33□□□□□ -0.6
SNRPN-204ENST00000400098 RNF181Q9P0P0 153 aa11.33□□□□□ -0.6
SNRPN-204ENST00000400098 BRPF1P55201 1214 aaPredicted RBP11.32□□□□□ -0.6
SNRPN-204ENST00000400098 CTSWP56202 376 aa11.32□□□□□ -0.6
SNRPN-204ENST00000400098 GRM8O00222 908 aa11.31□□□□□ -0.6
SNRPN-204ENST00000400098 ALDH1L1O75891 902 aa11.31□□□□□ -0.6
SNRPN-204ENST00000400098 EPHA10Q5JZY3 1008 aa11.31□□□□□ -0.6
SNRPN-204ENST00000400098 TTLL11Q8NHH1 800 aa11.31□□□□□ -0.6
SNRPN-204ENST00000400098 TAOK3Q9H2K8 898 aa11.31□□□□□ -0.6
SNRPN-204ENST00000400098 GREM2Q9H772 168 aa11.31□□□□□ -0.6
SNRPN-204ENST00000400098 NBPF7P0C2Y1 421 aaPredicted RBP11.3□□□□□ -0.6
SNRPN-204ENST00000400098 LMNB1P20700 586 aa11.3□□□□□ -0.6
SNRPN-204ENST00000400098 FOXO4P98177 505 aa11.3□□□□□ -0.6
SNRPN-204ENST00000400098 FKBP4Q02790 459 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNRPN-204ENST00000400098 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
SNRPN-204ENST00000400098 SOGA3Q5TF21 947 aa11.3□□□□□ -0.6
SNRPN-204ENST00000400098 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
SNRPN-204ENST00000400098 ZNF526Q8TF50 670 aaPredicted RBP11.3□□□□□ -0.6
SNRPN-204ENST00000400098 FRAT1Q92837 279 aaPredicted RBP11.3□□□□□ -0.6
SNRPN-204ENST00000400098 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
SNRPN-204ENST00000400098 PLA2G12BQ9BX93 195 aa11.3□□□□□ -0.6
SNRPN-204ENST00000400098 ZNF277Q9NRM2 450 aaPredicted RBP11.3□□□□□ -0.6
SNRPN-204ENST00000400098 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
SNRPN-204ENST00000400098 KIF16BQ96L93 1317 aa11.3□□□□□ -0.6
SNRPN-204ENST00000400098 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
SNRPN-204ENST00000400098 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
SNRPN-204ENST00000400098 SP8Q8IXZ3 490 aa11.29□□□□□ -0.6
SNRPN-204ENST00000400098 RTKN2Q8IZC4 609 aa11.29□□□□□ -0.6
SNRPN-204ENST00000400098 KAZALD1Q96I82 304 aa11.29□□□□□ -0.6
SNRPN-204ENST00000400098 API5Q9BZZ5 524 aaKnown RBP11.29□□□□□ -0.6
SNRPN-204ENST00000400098 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
SNRPN-204ENST00000400098 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
SNRPN-204ENST00000400098 BBOX1O75936 387 aa11.28□□□□□ -0.6
SNRPN-204ENST00000400098 CSF1RP07333 972 aa11.28□□□□□ -0.6
SNRPN-204ENST00000400098 TRIM27P14373 513 aa11.28□□□□□ -0.6
SNRPN-204ENST00000400098 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
SNRPN-204ENST00000400098 GPSM2P81274 684 aa11.28□□□□□ -0.6
SNRPN-204ENST00000400098 CLUAP1Q96AJ1 413 aa11.28□□□□□ -0.6
SNRPN-204ENST00000400098 USP44Q9H0E7 712 aa11.28□□□□□ -0.6
SNRPN-204ENST00000400098 UTYO14607 1347 aa11.28□□□□□ -0.6
SNRPN-204ENST00000400098 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
SNRPN-204ENST00000400098 ITGA6P23229 1130 aa11.27□□□□□ -0.61
SNRPN-204ENST00000400098 IARSP41252 1262 aaKnown RBP11.27□□□□□ -0.61
SNRPN-204ENST00000400098 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
SNRPN-204ENST00000400098 LMBR1LQ6UX01 489 aa11.27□□□□□ -0.61
SNRPN-204ENST00000400098 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.61
SNRPN-204ENST00000400098 ARHGAP45Q92619 1136 aa11.27□□□□□ -0.61
SNRPN-204ENST00000400098 GPR101Q96P66 508 aaPredicted RBP11.27□□□□□ -0.61
SNRPN-204ENST00000400098 PSMD1Q99460 953 aa11.27□□□□□ -0.61
SNRPN-204ENST00000400098 CHMP3Q9Y3E7 222 aa11.27□□□□□ -0.61
SNRPN-204ENST00000400098 PSME4Q14997 1843 aa11.27□□□□□ -0.61
SNRPN-204ENST00000400098 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
SNRPN-204ENST00000400098 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
SNRPN-204ENST00000400098 CCT4P50991 539 aaKnown RBP11.26□□□□□ -0.61
SNRPN-204ENST00000400098 CC2D2BQ6DHV5 1058 aa11.26□□□□□ -0.61
SNRPN-204ENST00000400098 DPP8Q6V1X1 898 aaPredicted RBP11.26□□□□□ -0.61
SNRPN-204ENST00000400098 ANKRD18AQ8IVF6 992 aa11.26□□□□□ -0.61
SNRPN-204ENST00000400098 MPNDQ8N594 471 aa11.26□□□□□ -0.61
SNRPN-204ENST00000400098 ANKRD44Q8N8A2 993 aa11.26□□□□□ -0.61
SNRPN-204ENST00000400098 ZNF594Q96JF6 807 aaPredicted RBP11.26□□□□□ -0.61
SNRPN-204ENST00000400098 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
SNRPN-204ENST00000400098 WTIPA6NIX2 430 aaPredicted RBP11.25□□□□□ -0.61
SNRPN-204ENST00000400098 AOC3Q16853 763 aa11.25□□□□□ -0.61
SNRPN-204ENST00000400098 ZKSCAN2Q63HK3 967 aa11.25□□□□□ -0.61
SNRPN-204ENST00000400098 INTS3Q68E01 1043 aaKnown RBP11.25□□□□□ -0.61
SNRPN-204ENST00000400098 TMC4Q7Z404 712 aa11.25□□□□□ -0.61
SNRPN-204ENST00000400098 TMEM57Q8N5G2 664 aa11.25□□□□□ -0.61
SNRPN-204ENST00000400098 MEIS3Q99687 375 aa11.25□□□□□ -0.61
SNRPN-204ENST00000400098 RTFDC1Q9BY42 306 aaPredicted RBP11.25□□□□□ -0.61
SNRPN-204ENST00000400098 POLLQ9UGP5 575 aa11.25□□□□□ -0.61
SNRPN-204ENST00000400098 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
SNRPN-204ENST00000400098 ZNF541Q9H0D2 1346 aa11.25□□□□□ -0.61
SNRPN-204ENST00000400098 ANKRD18BA2A2Z9 1011 aa11.24□□□□□ -0.61
SNRPN-204ENST00000400098 IPO8O15397 1037 aaKnown RBP11.24□□□□□ -0.61
SNRPN-204ENST00000400098 PPIP5K2O43314 1243 aa11.24□□□□□ -0.61
SNRPN-204ENST00000400098 RLBP1P12271 317 aa11.24□□□□□ -0.61
SNRPN-204ENST00000400098 CDC5LQ99459 802 aaKnown RBP11.24□□□□□ -0.61
SNRPN-204ENST00000400098 TMX4Q9H1E5 349 aaPredicted RBP11.24□□□□□ -0.61
SNRPN-204ENST00000400098 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
SNRPN-204ENST00000400098 RIMBP2O15034 1052 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms