RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 HSF2BPO75031 334 aa12.71□□□□□ -0.38
CACNA1C-217ENST00000399641 RRP1P56182 461 aaKnown RBP12.71□□□□□ -0.38
CACNA1C-217ENST00000399641 CCDC152Q4G0S7 254 aa12.71□□□□□ -0.38
CACNA1C-217ENST00000399641 JADE2Q9NQC1 790 aa12.71□□□□□ -0.38
CACNA1C-217ENST00000399641 EPRSP07814 1512 aaKnown RBP12.71□□□□□ -0.38
CACNA1C-217ENST00000399641 GABPAQ06546 454 aa12.71□□□□□ -0.38
CACNA1C-217ENST00000399641 PPP2R5DQ14738 602 aa12.71□□□□□ -0.38
CACNA1C-217ENST00000399641 IFNL2Q8IZJ0 200 aa12.71□□□□□ -0.38
CACNA1C-217ENST00000399641 USP21Q9UK80 565 aa12.71□□□□□ -0.38
CACNA1C-217ENST00000399641 A0A1B0GUL7 405 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 FOXD4Q12950 439 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 TRAPPC3LQ5T215 181 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 IQCA1Q86XH1 822 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 CCDC87Q9NVE4 849 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 SRGAP3O43295 1099 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 FCHSD2O94868 740 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 DNAJC21Q5F1R6 531 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 CCDC50Q8IVM0 306 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 ANLNQ9NQW6 1124 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 ERBINQ96RT1 1412 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 USO1O60763 962 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 LARP1BQ659C4 914 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 PPP1R21Q6ZMI0 780 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 ZNF804AQ7Z570 1209 aa12.7□□□□□ -0.38
CACNA1C-217ENST00000399641 ANKRD50Q9ULJ7 1429 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 SPATA17Q96L03 361 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 ZMAT2Q96NC0 199 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 CNTLNQ9NXG0 1405 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 GOLGA8AA7E2F4 631 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 GOLGA8BA8MQT2 603 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 ATP6V1E1P36543 226 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 ALS2CR12Q96Q35 445 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 EEF2P13639 858 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 VPS36Q86VN1 386 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 TACC3Q9Y6A5 838 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 FGFR1OPO95684 399 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 CEP85LQ5SZL2 805 aa12.69□□□□□ -0.38
CACNA1C-217ENST00000399641 SMIM24O75264 130 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 PAFAH1B1P43034 410 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 RAB34Q9BZG1 259 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 CASQ2O14958 399 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 SLC4A1P02730 911 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 ZFYP08048 801 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 GBP3Q9H0R5 595 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 KCNK9Q9NPC2 374 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 SNAPC4Q5SXM2 1469 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 STK25O00506 426 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 INPP1P49441 399 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 PTPN14Q15678 1187 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 FAM170AA1A519 330 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 LRRC45Q96CN5 670 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 CYP46A1Q9Y6A2 500 aa12.68□□□□□ -0.38
CACNA1C-217ENST00000399641 H0YIN7 160 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 ABT1Q9ULW3 272 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 NAIPQ13075 1403 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 GSDMBQ8TAX9 411 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 NUP62CLQ9H1M0 184 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 SMTNL1A8MU46 457 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 GNPATO15228 680 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 VPS41P49754 854 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 SLC12A5Q9H2X9 1139 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 FAM180AQ6UWF9 173 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 ATRIPQ8WXE1 791 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 NIP7Q9Y221 180 aaKnown RBP eCLIP12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 RPGRIP1LQ68CZ1 1315 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 KMT5BQ4FZB7 885 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 ANKRD24Q8TF21 1146 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
CACNA1C-217ENST00000399641 TXNDC9O14530 226 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 TPTE2Q6XPS3 522 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 FMNL3Q8IVF7 1028 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 PPP1R12CQ9BZL4 782 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 XAB2Q9HCS7 855 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 FAM135AQ9P2D6 1515 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 CHMP2AO43633 222 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 CNGA1P29973 690 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 MTIF2P46199 727 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 LARGE2Q8N3Y3 721 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 PPFIA3O75145 1194 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 PDE4BQ07343 736 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 CCDC25Q86WR0 208 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 PPANQ9NQ55 473 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 LIMCH1Q9UPQ0 1083 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 TTC21AQ8NDW8 1320 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 TSPY2A6NKD2 308 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 WIZO95785 1651 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 RXRBP28702 533 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 SKAP1Q86WV1 359 aa12.66□□□□□ -0.38
CACNA1C-217ENST00000399641 ZGPATQ8N5A5 531 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms