RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GCC1Q96CN9 775 aa12.58□□□□□ -0.4
CACNA1C-216ENST00000399638 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 PSMC4P43686 418 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 TAF7Q15545 349 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 CFAP58Q5T655 872 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 TRIM6Q9C030 488 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 TNMDQ9H2S6 317 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 ACTN2P35609 894 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 RNF34Q969K3 372 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 JAG2Q9Y219 1238 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 CBFA2T2O43439 604 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 LETM1O95202 739 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 IDEP14735 1019 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 RAB3GAP1Q15042 981 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 SPA17Q15506 151 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 CCDC40Q4G0X9 1142 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 DUSP27Q5VZP5 1158 aa12.57□□□□□ -0.4
CACNA1C-216ENST00000399638 TRAF1Q13077 416 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 KRT32Q14532 448 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 CCDC8Q9H0W5 538 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 NBPF1Q3BBV0 1214 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 PKD2L1Q9P0L9 805 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 NOP56O00567 594 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 PRPF40AO75400 957 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 MVPQ14764 893 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 FBXO31Q5XUX0 539 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 IMPG2Q9BZV3 1241 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 WDR7Q9Y4E6 1490 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
CACNA1C-216ENST00000399638 ZMYM3Q14202 1370 aa12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 ZYXQ15942 572 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 TDRD12Q587J7 1177 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 CYP7A1P22680 504 aa12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 TCOF1Q13428 1488 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 NAP1L3Q99457 506 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 ERCC3P19447 782 aa12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 GABPAQ06546 454 aa12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 ERMNQ8TAM6 284 aa12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 PHAXQ9H814 394 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 DCPSQ96C86 337 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-216ENST00000399638 SEPT10Q9P0V9 454 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 GUCY1B3Q02153 619 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 PRPF31Q8WWY3 499 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 TCP11L1Q9NUJ3 509 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 BTG4Q9NY30 223 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 SNX16P57768 344 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 IQCEQ6IPM2 695 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 TTC30AQ86WT1 665 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 TPD52P55327 224 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 HEATR3Q7Z4Q2 680 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 CSADQ9Y600 493 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-216ENST00000399638 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 GJC1P36383 396 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 TMEM67Q5HYA8 995 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 CNBD1Q8NA66 436 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 PRPF4BQ13523 1007 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 NAA25Q14CX7 972 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 MFSD6Q6ZSS7 791 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 MAP3K2Q9Y2U5 619 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 SLFN5Q08AF3 891 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 RNF169Q8NCN4 708 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 HOOK2Q96ED9 719 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 DNMBPQ6XZF7 1577 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
CACNA1C-216ENST00000399638 POLA1P09884 1462 aaPredicted RBP12.52□□□□□ -0.4
CACNA1C-216ENST00000399638 CASTP20810 708 aaKnown RBP12.52□□□□□ -0.4
CACNA1C-216ENST00000399638 AMPD3Q01432 767 aa12.52□□□□□ -0.4
CACNA1C-216ENST00000399638 HS1BP3Q53T59 392 aa12.52□□□□□ -0.4
CACNA1C-216ENST00000399638 GADL1Q6ZQY3 521 aa12.52□□□□□ -0.4
CACNA1C-216ENST00000399638 RXRBP28702 533 aa12.52□□□□□ -0.41
CACNA1C-216ENST00000399638 USP37Q86T82 979 aa12.52□□□□□ -0.41
CACNA1C-216ENST00000399638 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.41
CACNA1C-216ENST00000399638 C6orf50Q9HD87 102 aa12.52□□□□□ -0.41
CACNA1C-216ENST00000399638 SATB1Q01826 763 aa12.52□□□□□ -0.41
CACNA1C-216ENST00000399638 NAA16Q6N069 864 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-216ENST00000399638 NME9Q86XW9 330 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms