RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
ITSN1-207ENST00000399338 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
ITSN1-207ENST00000399338 GRIK3Q13003 919 aa12.84□□□□□ -0.35
ITSN1-207ENST00000399338 TRAPPC8Q9Y2L5 1435 aa12.84□□□□□ -0.35
ITSN1-207ENST00000399338 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
ITSN1-207ENST00000399338 BEND6Q5SZJ8 279 aaPredicted RBP12.84□□□□□ -0.35
ITSN1-207ENST00000399338 HOMER1Q86YM7 354 aa12.84□□□□□ -0.35
ITSN1-207ENST00000399338 CTCFLQ8NI51 663 aaPredicted RBP12.84□□□□□ -0.35
ITSN1-207ENST00000399338 FAM210AQ96ND0 272 aa12.84□□□□□ -0.35
ITSN1-207ENST00000399338 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
ITSN1-207ENST00000399338 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
ITSN1-207ENST00000399338 ARMCX5Q6P1M9 558 aa12.83□□□□□ -0.36
ITSN1-207ENST00000399338 SMC3Q9UQE7 1217 aa12.83□□□□□ -0.36
ITSN1-207ENST00000399338 MAST1Q9Y2H9 1570 aa12.83□□□□□ -0.36
ITSN1-207ENST00000399338 ADCY2Q08462 1091 aa12.83□□□□□ -0.36
ITSN1-207ENST00000399338 C11orf57Q6ZUT1 292 aaPredicted RBP12.83□□□□□ -0.36
ITSN1-207ENST00000399338 HDXQ7Z353 690 aa12.83□□□□□ -0.36
ITSN1-207ENST00000399338 TTC14Q96N46 770 aa12.83□□□□□ -0.36
ITSN1-207ENST00000399338 ETAA1Q9NY74 926 aa12.83□□□□□ -0.36
ITSN1-207ENST00000399338 KIF24Q5T7B8 1368 aa12.83□□□□□ -0.36
ITSN1-207ENST00000399338 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 RTN2O75298 545 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 OS9Q13438 667 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-207ENST00000399338 CRYMQ14894 314 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 CCDC150Q8NCX0 1101 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 FAM71BQ8TC56 605 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 N4BP2L2Q92802 583 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-207ENST00000399338 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
ITSN1-207ENST00000399338 CTAGE5O15320 804 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 TXLNAP40222 546 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 PREPLQ4J6C6 727 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-207ENST00000399338 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 CLIC6Q96NY7 704 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 DUOX2Q9NRD8 1548 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 ABCA6Q8N139 1617 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 ARHGEF40Q8TER5 1519 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
ITSN1-207ENST00000399338 USP5P45974 858 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
ITSN1-207ENST00000399338 SETQ01105 290 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-207ENST00000399338 MCM6Q14566 821 aa12.82□□□□□ -0.36
ITSN1-207ENST00000399338 DHX40Q8IX18 779 aaKnown RBP12.82□□□□□ -0.36
ITSN1-207ENST00000399338 ZKSCAN4Q969J2 545 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-207ENST00000399338 PREX2Q70Z35 1606 aa12.81□□□□□ -0.36
ITSN1-207ENST00000399338 CCP110O43303 1012 aa12.81□□□□□ -0.36
ITSN1-207ENST00000399338 KRT85P78386 507 aa12.81□□□□□ -0.36
ITSN1-207ENST00000399338 ZNF483Q8TF39 744 aaPredicted RBP12.81□□□□□ -0.36
ITSN1-207ENST00000399338 DDX11Q96FC9 970 aa12.81□□□□□ -0.36
ITSN1-207ENST00000399338 PPP2R3AQ06190 1150 aa12.81□□□□□ -0.36
ITSN1-207ENST00000399338 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
ITSN1-207ENST00000399338 RUFY3Q7L099 469 aa12.81□□□□□ -0.36
ITSN1-207ENST00000399338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.81□□□□□ -0.36
ITSN1-207ENST00000399338 CABS1Q96KC9 395 aa12.81□□□□□ -0.36
ITSN1-207ENST00000399338 TRIM6Q9C030 488 aaPredicted RBP12.81□□□□□ -0.36
ITSN1-207ENST00000399338 ANO2Q9NQ90 1003 aa12.81□□□□□ -0.36
ITSN1-207ENST00000399338 MRFAP1Q9Y605 127 aa12.81□□□□□ -0.36
ITSN1-207ENST00000399338 USP32Q8NFA0 1604 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 NR1I2O75469 434 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 GJB2P29033 226 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 L1RE1Q9UN81 338 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 CCNHP51946 323 aaPredicted RBP12.8□□□□□ -0.36
ITSN1-207ENST00000399338 PSME1Q06323 249 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 XAGE2Q96GT9 111 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 LIMCH1Q9UPQ0 1083 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 FAM169AQ9Y6X4 670 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 ZC3H13Q5T200 1668 aaKnown RBP12.8□□□□□ -0.36
ITSN1-207ENST00000399338 NPHP3Q7Z494 1330 aa12.8□□□□□ -0.36
ITSN1-207ENST00000399338 TMCO5BA8MYB1 307 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 IFIT2P09913 472 aaKnown RBP12.79□□□□□ -0.36
ITSN1-207ENST00000399338 HSPA4P34932 840 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 PDE1AP54750 535 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 WLSQ5T9L3 541 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 GOLGA1Q92805 767 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 KCNB2Q92953 911 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 MPHOSPH8Q99549 860 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 RPS6KL1Q9Y6S9 549 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 SPHKAPQ2M3C7 1700 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 EPB41L2O43491 1005 aaKnown RBP12.79□□□□□ -0.36
ITSN1-207ENST00000399338 NF2P35240 595 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 FAM204AQ9H8W3 233 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 RAB21Q9UL25 225 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 ATP10BO94823 1461 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 CHUKO15111 745 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 VAMP4O75379 141 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 CHMLP26374 656 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 AK2P54819 239 aa12.79□□□□□ -0.36
ITSN1-207ENST00000399338 IPO7O95373 1038 aaKnown RBP12.78□□□□□ -0.36
ITSN1-207ENST00000399338 SAMD9LQ8IVG5 1584 aa12.78□□□□□ -0.36
ITSN1-207ENST00000399338 IQGAP3Q86VI3 1631 aa12.78□□□□□ -0.36
ITSN1-207ENST00000399338 SOS1Q07889 1333 aaPredicted RBP12.78□□□□□ -0.36
ITSN1-207ENST00000399338 SFPQP23246 707 aaKnown RBP eCLIP12.78□□□□□ -0.36
ITSN1-207ENST00000399338 FNTAP49354 379 aa12.78□□□□□ -0.36
ITSN1-207ENST00000399338 STX1AQ16623 288 aa12.78□□□□□ -0.36
ITSN1-207ENST00000399338 AP1ARQ63HQ0 302 aa12.78□□□□□ -0.36
ITSN1-207ENST00000399338 CCDC26Q8TAB7 109 aa12.78□□□□□ -0.36
ITSN1-207ENST00000399338 DHX8Q14562 1220 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms