RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.33■□□□□ 0.36
CCDC144A-205ENST00000399264 FPGT-TNNI3KV9GXZ4 949 aa17.33■□□□□ 0.36
CCDC144A-205ENST00000399264 MED23Q9ULK4 1368 aa17.33■□□□□ 0.36
CCDC144A-205ENST00000399264 RPS6KB1P23443 525 aa17.32■□□□□ 0.36
CCDC144A-205ENST00000399264 C1orf167Q5SNV9 1468 aa17.32■□□□□ 0.36
CCDC144A-205ENST00000399264 FUCA2Q9BTY2 467 aa17.32■□□□□ 0.36
CCDC144A-205ENST00000399264 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
CCDC144A-205ENST00000399264 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
CCDC144A-205ENST00000399264 OVOS2A0A0G2JMS6 1433 aa17.31■□□□□ 0.36
CCDC144A-205ENST00000399264 SNRPA1P09661 255 aaKnown RBP17.31■□□□□ 0.36
CCDC144A-205ENST00000399264 LMBR1LQ6UX01 489 aa17.31■□□□□ 0.36
CCDC144A-205ENST00000399264 IFNL2Q8IZJ0 200 aa17.31■□□□□ 0.36
CCDC144A-205ENST00000399264 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
CCDC144A-205ENST00000399264 FOSBP53539 338 aa17.3■□□□□ 0.36
CCDC144A-205ENST00000399264 COPRSQ9NQ92 184 aa17.3■□□□□ 0.36
CCDC144A-205ENST00000399264 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
CCDC144A-205ENST00000399264 C19orf44Q9H6X5 657 aa17.3■□□□□ 0.36
CCDC144A-205ENST00000399264 SNRKQ9NRH2 765 aa17.3■□□□□ 0.36
CCDC144A-205ENST00000399264 NBPF26B4DH59 902 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 TPM2P07951 284 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 TIMM10P62072 90 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 NBPF14Q5TI25 921 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 NBPF10Q6P3W6 841 aaKnown RBP17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 TTLL7Q6ZT98 887 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 NBPF15Q8N660 670 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 ZNF609O15014 1411 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 HIP1O00291 1037 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 PSMA5P28066 241 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 CKAP2LQ8IYA6 745 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 CYP21A2P08686 494 aa17.29■□□□□ 0.36
CCDC144A-205ENST00000399264 ATP5JP18859 108 aa17.28■□□□□ 0.36
CCDC144A-205ENST00000399264 ZNF594Q96JF6 807 aaPredicted RBP17.28■□□□□ 0.36
CCDC144A-205ENST00000399264 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
CCDC144A-205ENST00000399264 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.28■□□□□ 0.36
CCDC144A-205ENST00000399264 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
CCDC144A-205ENST00000399264 KDM4AO75164 1064 aa17.27■□□□□ 0.36
CCDC144A-205ENST00000399264 CASP7P55210 303 aa17.27■□□□□ 0.36
CCDC144A-205ENST00000399264 CABP4P57796 275 aa17.27■□□□□ 0.36
CCDC144A-205ENST00000399264 Q6ZUG5 572 aa17.27■□□□□ 0.36
CCDC144A-205ENST00000399264 STOX1Q6ZVD7 989 aa17.27■□□□□ 0.36
CCDC144A-205ENST00000399264 SCN11AQ9UI33 1791 aa17.27■□□□□ 0.36
CCDC144A-205ENST00000399264 UQCRHLA0A096LP55 91 aa17.27■□□□□ 0.35
CCDC144A-205ENST00000399264 A1BGP04217 495 aa17.27■□□□□ 0.35
CCDC144A-205ENST00000399264 UQCRHP07919 91 aa17.27■□□□□ 0.35
CCDC144A-205ENST00000399264 FAM184AQ8NB25 1140 aa17.27■□□□□ 0.35
CCDC144A-205ENST00000399264 SPC24Q8NBT2 197 aa17.27■□□□□ 0.35
CCDC144A-205ENST00000399264 TSC1Q92574 1164 aa17.27■□□□□ 0.35
CCDC144A-205ENST00000399264 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.35
CCDC144A-205ENST00000399264 FAM13BQ9NYF5 915 aa17.27■□□□□ 0.35
CCDC144A-205ENST00000399264 UBE2Q2Q8WVN8 375 aa17.26■□□□□ 0.35
CCDC144A-205ENST00000399264 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
CCDC144A-205ENST00000399264 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
CCDC144A-205ENST00000399264 CEBPZQ03701 1054 aaKnown RBP17.26■□□□□ 0.35
CCDC144A-205ENST00000399264 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
CCDC144A-205ENST00000399264 NEK1Q96PY6 1258 aa17.26■□□□□ 0.35
CCDC144A-205ENST00000399264 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
CCDC144A-205ENST00000399264 GOLIM4O00461 696 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 RRP9O43818 475 aaKnown RBP17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 KRT85P78386 507 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 RABL6Q3YEC7 729 aaPredicted RBP17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 CHST3Q7LGC8 479 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 ARID3AQ99856 593 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 MCM5P33992 734 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 UVSSAQ2YD98 709 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 LRRC24Q50LG9 513 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 USPL1Q5W0Q7 1092 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 BRF1Q92994 677 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 FTOQ9C0B1 505 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 ZBTB3Q9H5J0 574 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 ATF3P18847 181 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 FOXO4P98177 505 aa17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 CCDC85AQ96PX6 553 aaPredicted RBP17.25■□□□□ 0.35
CCDC144A-205ENST00000399264 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
CCDC144A-205ENST00000399264 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
CCDC144A-205ENST00000399264 ATG9AQ7Z3C6 839 aa17.24■□□□□ 0.35
CCDC144A-205ENST00000399264 LUZP1Q86V48 1076 aa17.24■□□□□ 0.35
CCDC144A-205ENST00000399264 PGBD1Q96JS3 809 aa17.24■□□□□ 0.35
CCDC144A-205ENST00000399264 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
CCDC144A-205ENST00000399264 PUS3Q9BZE2 481 aaKnown RBP17.24■□□□□ 0.35
CCDC144A-205ENST00000399264 LETM1O95202 739 aaPredicted RBP17.23■□□□□ 0.35
CCDC144A-205ENST00000399264 LEO1Q8WVC0 666 aaPredicted RBP17.23■□□□□ 0.35
CCDC144A-205ENST00000399264 HAUS7Q99871 368 aa17.23■□□□□ 0.35
CCDC144A-205ENST00000399264 JCADQ9P266 1359 aa17.23■□□□□ 0.35
CCDC144A-205ENST00000399264 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
CCDC144A-205ENST00000399264 MCMDC2Q4G0Z9 681 aa17.23■□□□□ 0.35
CCDC144A-205ENST00000399264 GTF3C6Q969F1 213 aa17.23■□□□□ 0.35
CCDC144A-205ENST00000399264 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
CCDC144A-205ENST00000399264 AFDNP55196 1824 aaKnown RBP17.23■□□□□ 0.35
CCDC144A-205ENST00000399264 NR1I2O75469 434 aa17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 SCRN1Q12765 414 aa17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 TSGA10IPQ3SY00 556 aa17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 DNTTIP2Q5QJE6 756 aaKnown RBP17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 MRVI1Q9Y6F6 885 aa17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 TMEM94Q12767 1356 aa17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 CCT2P78371 535 aaKnown RBP17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 ANKRD1Q15327 319 aa17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 PLBD2Q8NHP8 589 aa17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 KCNF1Q9H3M0 494 aa17.22■□□□□ 0.35
CCDC144A-205ENST00000399264 ZNF330Q9Y3S2 320 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms