RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 ZBTB38Q8NAP3 1195 aaPredicted RBP11.51□□□□□ -0.57
LINC00243-201ENST00000399196 FAM89AQ96GI7 184 aa11.51□□□□□ -0.57
LINC00243-201ENST00000399196 IFIT2P09913 472 aaKnown RBP11.5□□□□□ -0.57
LINC00243-201ENST00000399196 AACSQ86V21 672 aa11.5□□□□□ -0.57
LINC00243-201ENST00000399196 NLRP10Q86W26 655 aa11.5□□□□□ -0.57
LINC00243-201ENST00000399196 CCDC8Q9H0W5 538 aaPredicted RBP11.5□□□□□ -0.57
LINC00243-201ENST00000399196 COPRSQ9NQ92 184 aa11.5□□□□□ -0.57
LINC00243-201ENST00000399196 PDIA4P13667 645 aaKnown RBP11.5□□□□□ -0.57
LINC00243-201ENST00000399196 SMIM5Q71RC9 77 aa11.5□□□□□ -0.57
LINC00243-201ENST00000399196 GPATCH3Q96I76 525 aa11.5□□□□□ -0.57
LINC00243-201ENST00000399196 TRMT112Q9UI30 125 aaKnown RBP11.5□□□□□ -0.57
LINC00243-201ENST00000399196 CCNL1Q9UK58 526 aaPredicted RBP11.5□□□□□ -0.57
LINC00243-201ENST00000399196 APBA3O96018 575 aa11.49□□□□□ -0.57
LINC00243-201ENST00000399196 AMIGO3Q86WK7 504 aa11.49□□□□□ -0.57
LINC00243-201ENST00000399196 SYNE4Q8N205 404 aa11.49□□□□□ -0.57
LINC00243-201ENST00000399196 TTC41PQ6P2S7 1318 aa11.49□□□□□ -0.57
LINC00243-201ENST00000399196 NUP98P52948 1817 aa11.49□□□□□ -0.57
LINC00243-201ENST00000399196 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
LINC00243-201ENST00000399196 FRAT2O75474 233 aaPredicted RBP11.48□□□□□ -0.57
LINC00243-201ENST00000399196 CDK11BP21127 795 aaKnown RBP11.48□□□□□ -0.57
LINC00243-201ENST00000399196 HSCBQ8IWL3 235 aa11.48□□□□□ -0.57
LINC00243-201ENST00000399196 CNKSR2Q8WXI2 1034 aa11.48□□□□□ -0.57
LINC00243-201ENST00000399196 ECHDC1Q9NTX5 307 aa11.48□□□□□ -0.57
LINC00243-201ENST00000399196 PALD1Q9ULE6 856 aa11.48□□□□□ -0.57
LINC00243-201ENST00000399196 ZNF652Q9Y2D9 606 aa11.48□□□□□ -0.57
LINC00243-201ENST00000399196 REC8O95072 547 aa11.48□□□□□ -0.57
LINC00243-201ENST00000399196 DDIT3P35638 169 aa11.48□□□□□ -0.57
LINC00243-201ENST00000399196 CCDC57Q2TAC2 916 aa11.48□□□□□ -0.57
LINC00243-201ENST00000399196 CNTNAP4Q9C0A0 1308 aa11.48□□□□□ -0.57
LINC00243-201ENST00000399196 GLRX3O76003 335 aaKnown RBP11.47□□□□□ -0.57
LINC00243-201ENST00000399196 CAMTA2O94983 1202 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 TFCP2Q12800 502 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 TXNRD1Q16881 649 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 ZNF34Q8IZ26 560 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 RGPD3A6NKT7 1758 aaPredicted RBP11.47□□□□□ -0.57
LINC00243-201ENST00000399196 RGPD4Q7Z3J3 1758 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 CDHR2Q9BYE9 1310 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 ANKRD36CQ5JPF3 1778 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 FAM177BA6PVY3 158 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 IRS4O14654 1257 aaPredicted RBP11.47□□□□□ -0.57
LINC00243-201ENST00000399196 TAF7LQ5H9L4 462 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 ATG9AQ7Z3C6 839 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 ZNF594Q96JF6 807 aaPredicted RBP11.47□□□□□ -0.57
LINC00243-201ENST00000399196 CCDC85AQ96PX6 553 aaPredicted RBP11.47□□□□□ -0.57
LINC00243-201ENST00000399196 PLA2G12BQ9BX93 195 aa11.47□□□□□ -0.57
LINC00243-201ENST00000399196 DBNLQ9UJU6 430 aaKnown RBP11.47□□□□□ -0.57
LINC00243-201ENST00000399196 UBN2Q6ZU65 1347 aa11.46□□□□□ -0.57
LINC00243-201ENST00000399196 PLSCR1O15162 318 aa11.46□□□□□ -0.57
LINC00243-201ENST00000399196 GNPATO15228 680 aa11.46□□□□□ -0.57
LINC00243-201ENST00000399196 SGSM2O43147 1006 aa11.46□□□□□ -0.57
LINC00243-201ENST00000399196 PARP10Q53GL7 1025 aa11.46□□□□□ -0.57
LINC00243-201ENST00000399196 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.57
LINC00243-201ENST00000399196 NIP7Q9Y221 180 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00243-201ENST00000399196 DEKP35659 375 aaKnown RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 EN1Q05925 392 aaPredicted RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 IFIT5Q13325 482 aaKnown RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 RABEP1Q15276 862 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 DEFB132Q7Z7B7 95 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 CNTROBQ8N137 903 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 EDC3Q96F86 508 aaKnown RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 UTP14AQ9BVJ6 771 aaKnown RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 ANO2Q9NQ90 1003 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 K7ELQ4 463 aaPredicted RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 RPS6KA4O75676 772 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 IL15P40933 162 aaPredicted RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 CTSWP56202 376 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 EZH2Q15910 746 aaKnown RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 LRRC24Q50LG9 513 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 PUS3Q9BZE2 481 aaKnown RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
LINC00243-201ENST00000399196 NDUFB9Q9Y6M9 179 aa11.45□□□□□ -0.58
LINC00243-201ENST00000399196 EYA2O00167 538 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 PDE8AO60658 829 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 SUSD4Q5VX71 490 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 CWC27Q6UX04 472 aaKnown RBP11.44□□□□□ -0.58
LINC00243-201ENST00000399196 CLEC4GQ6UXB4 293 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 CAMKK2Q96RR4 588 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 DBNDD2Q9BQY9 259 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 LSG1Q9H089 658 aaKnown RBP11.44□□□□□ -0.58
LINC00243-201ENST00000399196 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 UBR3Q6ZT12 1888 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 ZPR1O75312 459 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 CSF1RP07333 972 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 HSP90B1P14625 803 aaKnown RBP11.44□□□□□ -0.58
LINC00243-201ENST00000399196 ZNF827Q17R98 1081 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 SLC27A3Q5K4L6 730 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 AK7Q96M32 723 aa11.44□□□□□ -0.58
LINC00243-201ENST00000399196 C4AP0C0L4 1744 aa11.43□□□□□ -0.58
LINC00243-201ENST00000399196 ANKRD18BA2A2Z9 1011 aa11.43□□□□□ -0.58
LINC00243-201ENST00000399196 CIAO1O76071 339 aa11.43□□□□□ -0.58
LINC00243-201ENST00000399196 CHGBP05060 677 aa11.43□□□□□ -0.58
LINC00243-201ENST00000399196 ILDR2Q71H61 639 aa11.43□□□□□ -0.58
LINC00243-201ENST00000399196 TTLL11Q8NHH1 800 aa11.43□□□□□ -0.58
LINC00243-201ENST00000399196 MYH3P11055 1940 aa11.43□□□□□ -0.58
LINC00243-201ENST00000399196 ITGA6P23229 1130 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 IL17RAQ96F46 866 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 FAM227BQ96M60 508 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms